Cow genome map
| Conread name: | Pig4-TMW8019J06 |
| Conread position: | 11-177 |
| Cow position: | chr25:22575714-22575547 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 11-192 |
| Cow position: | chr25:33245741-33245909 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 7, 45 |
| Conread position: | 11-194 |
| Cow position: | chr25:24136628-24136448 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 169, 125 |
| Conread position: | 11-200 |
| Cow position: | chr25:10012241-10012049 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 18-196 |
| Cow position: | chr25:26457869-26457687 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 42, 38 |
| Conread position: | 19-200 |
| Cow position: | chr25:18161108-18161283 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 147, 18 |
| Conread position: | 21-165 |
| Cow position: | chr25:16007607-16007755 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-177 |
| Cow position: | chr25:25961782-25961935 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 35 |
| Conread position: | 21-182 |
| Cow position: | chr25:14467268-14467101 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-186 |
| Cow position: | chr25:40957170-40957004 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 21-187 |
| Cow position: | chr25:23410481-23410648 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 21-195 |
| Cow position: | chr25:8576511-8576680 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 169, 108 |
| Conread position: | 21-196 |
| Cow position: | chr25:10205061-10204884 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 163 |
| Conread position: | 21-204 |
| Cow position: | chr25:8512277-8512089 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-204 |
| Cow position: | chr25:12234940-12234763 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 21-204 |
| Cow position: | chr25:20076315-20076495 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 159, 45 |
| Conread position: | 22-175 |
| Cow position: | chr25:13333242-13333396 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 22-189 |
| Cow position: | chr25:8560686-8560850 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 154, 33 |
| Conread position: | 23-163 |
| Cow position: | chr25:32606506-32606362 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 23-166 |
| Cow position: | chr25:6256119-6255974 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 84, 67 |
| Conread position: | 23-172 |
| Cow position: | chr25:30319629-30319475 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 23-188 |
| Cow position: | chr25:12239328-12239163 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-194 |
| Cow position: | chr25:26270114-26269949 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 23-204 |
| Cow position: | chr25:16001700-16001527 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 23-204 |
| Cow position: | chr25:21245787-21245606 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 84, 148 |
| Conread position: | 23-204 |
| Cow position: | chr25:24405916-24405735 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 157, 146 |
| Conread position: | 24-169 |
| Cow position: | chr25:12204291-12204435 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 32 |
| Conread position: | 24-182 |
| Cow position: | chr25:10218229-10218069 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 83, 66 |
| Conread position: | 24-204 |
| Cow position: | chr25:36644127-36643956 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 6 |
| Conread position: | 25-200 |
| Cow position: | chr25:11989696-11989507 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 26-194 |
| Cow position: | chr25:33691376-33691547 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 107 |
| Conread position: | 27-177 |
| Cow position: | chr25:33142086-33141935 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 29 |
| Conread position: | 35-171 |
| Cow position: | chr25:27504348-27504210 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 35-178 |
| Cow position: | chr25:9961341-9961196 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 64 |
| Conread position: | 35-195 |
| Cow position: | chr25:16555594-16555755 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 35-204 |
| Cow position: | chr25:395188-395352 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 35-204 |
| Cow position: | chr25:25827298-25827469 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 62-190 |
| Cow position: | chr25:16691522-16691650 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 66-196 |
| Cow position: | chr25:34970330-34970455 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 72-186 |
| Cow position: | chr25:16560308-16560192 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.