Cow genome map
| Conread name: | Pig4-TMW8019J06 |
| Conread position: | 3-199 |
| Cow position: | chr27:23600416-23600225 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 87, 7 |
| Conread position: | 5-204 |
| Cow position: | chr27:12243983-12244170 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 10-176 |
| Cow position: | chr27:19577822-19577656 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 83 |
| Conread position: | 10-186 |
| Cow position: | chr27:6037270-6037094 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 101, 45 |
| Conread position: | 10-203 |
| Cow position: | chr27:6454362-6454165 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 86 |
| Conread position: | 11-177 |
| Cow position: | chr27:30677056-30676890 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-180 |
| Cow position: | chr27:30561059-30560892 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 11-204 |
| Cow position: | chr27:14937282-14937474 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 123, 34 |
| Conread position: | 20-204 |
| Cow position: | chr27:19647804-19647987 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 128, 15 |
| Conread position: | 21-163 |
| Cow position: | chr27:29019612-29019757 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 21-169 |
| Cow position: | chr27:8048600-8048753 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 21-175 |
| Cow position: | chr27:25676363-25676209 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 24, 107 |
| Conread position: | 21-177 |
| Cow position: | chr27:25471276-25471122 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 21-191 |
| Cow position: | chr27:18948454-18948625 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 21-194 |
| Cow position: | chr27:10086545-10086715 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 21-196 |
| Cow position: | chr27:12424790-12424957 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 155, 42 |
| Conread position: | 21-196 |
| Cow position: | chr27:20765827-20765996 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-204 |
| Cow position: | chr27:6160120-6159936 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 21-204 |
| Cow position: | chr27:16493708-16493536 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 21-204 |
| Cow position: | chr27:19637779-19637594 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 41, 100 |
| Conread position: | 21-204 |
| Cow position: | chr27:29038808-29038985 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 21-205 |
| Cow position: | chr27:21138959-21138775 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 21-205 |
| Cow position: | chr27:23659204-23659385 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 155, 26 |
| Conread position: | 22-186 |
| Cow position: | chr27:6620281-6620115 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 51 |
| Conread position: | 22-196 |
| Cow position: | chr27:16580758-16580581 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 22-196 |
| Cow position: | chr27:19601512-19601343 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 23-181 |
| Cow position: | chr27:20592118-20591957 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 69 |
| Conread position: | 23-193 |
| Cow position: | chr27:1498451-1498282 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 144, 85 |
| Conread position: | 23-196 |
| Cow position: | chr27:9169510-9169682 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 23-202 |
| Cow position: | chr27:21569709-21569890 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 48 |
| Conread position: | 23-202 |
| Cow position: | chr27:22547270-22547449 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 23-202 |
| Cow position: | chr27:27550613-27550784 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 23-217 |
| Cow position: | chr27:26440922-26441122 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 24-192 |
| Cow position: | chr27:26492567-26492737 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 61 |
| Conread position: | 24-200 |
| Cow position: | chr27:22268638-22268460 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 26-186 |
| Cow position: | chr27:8430309-8430467 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 34-194 |
| Cow position: | chr27:11416572-11416414 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 35-163 |
| Cow position: | chr27:6038719-6038591 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-177 |
| Cow position: | chr27:26299961-26299817 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 24, 122 |
| Conread position: | 35-192 |
| Cow position: | chr27:465080-464920 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 35-204 |
| Cow position: | chr27:25998823-25998658 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 35-204 |
| Cow position: | chr27:27053415-27053250 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 40-181 |
| Cow position: | chr27:22330551-22330695 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 43-175 |
| Cow position: | chr27:14874753-14874620 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 63-197 |
| Cow position: | chr27:9691958-9692090 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
Show alignments to all cow chromosomes.