Cow genome map
| Conread name: | Pig4-TMW8019J06 |
| Conread position: | 8-133 |
| Cow position: | chr29:37719716-37719841 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 64 |
| Conread position: | 10-196 |
| Cow position: | chr29:4367528-4367716 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 10-207 |
| Cow position: | chr29:22175498-22175689 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 11-155 |
| Cow position: | chr29:35442652-35442509 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 11-204 |
| Cow position: | chr29:19508768-19508952 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 12-205 |
| Cow position: | chr29:11071895-11071693 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 184 |
| Conread position: | 20-176 |
| Cow position: | chr29:12451188-12451350 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 21-162 |
| Cow position: | chr29:34609905-34609762 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 21-170 |
| Cow position: | chr29:44135645-44135493 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 21-174 |
| Cow position: | chr29:10187876-10188025 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 21-174 |
| Cow position: | chr29:14484727-14484574 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 88, 148 |
| Conread position: | 21-175 |
| Cow position: | chr29:18021861-18021709 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 21-182 |
| Cow position: | chr29:18072748-18072913 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 24, 135 |
| Conread position: | 21-183 |
| Cow position: | chr29:709304-709139 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 21-186 |
| Cow position: | chr29:23743221-23743072 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 21-193 |
| Cow position: | chr29:2984703-2984878 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 21-196 |
| Cow position: | chr29:650093-650271 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 22, 138 |
| Conread position: | 21-196 |
| Cow position: | chr29:13553951-13554131 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 149 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-197 |
| Cow position: | chr29:10153971-10153796 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 158 |
| Conread position: | 21-197 |
| Cow position: | chr29:34736647-34736473 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 149, 22 |
| Conread position: | 21-203 |
| Cow position: | chr29:18695076-18695250 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 128, 75 |
| Conread position: | 21-204 |
| Cow position: | chr29:26129316-26129497 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 119 |
| Conread position: | 21-229 |
| Cow position: | chr29:7408070-7407858 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 21-247 |
| Cow position: | chr29:38992994-38992768 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 93, 20 |
| Conread position: | 22-170 |
| Cow position: | chr29:32644743-32644889 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 22-186 |
| Cow position: | chr29:7392914-7393083 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 22-195 |
| Cow position: | chr29:22778357-22778186 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 22-204 |
| Cow position: | chr29:11787612-11787798 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 104 |
| Conread position: | 23-173 |
| Cow position: | chr29:21925030-21925181 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 23-175 |
| Cow position: | chr29:87201-87045 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 23-186 |
| Cow position: | chr29:22162430-22162272 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 23-194 |
| Cow position: | chr29:356147-356309 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 23-195 |
| Cow position: | chr29:463833-463665 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 157, 66 |
| Conread position: | 23-195 |
| Cow position: | chr29:4625175-4625007 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 23-195 |
| Cow position: | chr29:23984142-23983966 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 23-196 |
| Cow position: | chr29:19907176-19907348 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 23-197 |
| Cow position: | chr29:9686180-9686007 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 88, 7 |
| Conread position: | 23-204 |
| Cow position: | chr29:4520156-4520338 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 149, 85 |
| Conread position: | 26-182 |
| Cow position: | chr29:1556756-1556909 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 26-196 |
| Cow position: | chr29:37961154-37960984 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 136, 103 |
| Conread position: | 27-165 |
| Cow position: | chr29:36404646-36404784 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-192 |
| Cow position: | chr29:41530675-41530837 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 30-197 |
| Cow position: | chr29:5964593-5964423 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 131, 99 |
| Conread position: | 34-192 |
| Cow position: | chr29:603483-603331 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 142, 58 |
| Conread position: | 35-170 |
| Cow position: | chr29:4085152-4085288 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 75, 61 |
| Conread position: | 35-182 |
| Cow position: | chr29:9912005-9912152 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 137, 73 |
| Conread position: | 35-194 |
| Cow position: | chr29:12901276-12901116 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 146 |
| Conread position: | 35-204 |
| Cow position: | chr29:16055302-16055129 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 35-204 |
| Cow position: | chr29:21534843-21534674 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 154, 42 |
| Conread position: | 42-204 |
| Cow position: | chr29:45383965-45384125 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 44-193 |
| Cow position: | chr29:12025629-12025480 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 77-195 |
| Cow position: | chr29:23233323-23233442 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 78-204 |
| Cow position: | chr29:14758987-14758860 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
Show alignments to all cow chromosomes.