Cow genome map

Conread name: Pig4-TMW8019J06

Conread position: 10-166
Cow position: chr6:59249832-59249679 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 86

Conread position: 10-194
Cow position: chr6:47625118-47624931 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 145

Conread position: 10-196
Cow position: chr6:827857-827670 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 140, 51

Conread position: 10-204
Cow position: chr6:56041773-56041583 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 108, 45

Conread position: 11-174
Cow position: chr6:2582724-2582883 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 11-175
Cow position: chr6:6367812-6367656 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 77, 56

Conread position: 11-183
Cow position: chr6:42617729-42617904 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 11-188
Cow position: chr6:8318314-8318136 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 168, 0

Conread position: 11-189
Cow position: chr6:7824610-7824791 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 92

Conread position: 11-189
Cow position: chr6:36194437-36194624 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 124

Conread position: 11-192
Cow position: chr6:24223310-24223126 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 11-195
Cow position: chr6:44372093-44371913 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 11-196
Cow position: chr6:6995096-6994919 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 163, 31

Conread position: 11-196
Cow position: chr6:24623127-24622941 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 74

Conread position: 11-204
Cow position: chr6:24583384-24583181 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 144

Conread position: 11-204
Cow position: chr6:35415673-35415475 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 11-204
Cow position: chr6:52556625-52556440 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 80

Conread position: 12-195
Cow position: chr6:60152887-60153069 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 163, 0

Conread position: 21-133
Cow position: chr6:52731287-52731175 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-156
Cow position: chr6:35703329-35703194 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-165
Cow position: chr6:67436848-67436991 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 89

Conread position: 21-167
Cow position: chr6:4079523-4079382 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 21-167
Cow position: chr6:47327207-47327060 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 21-171
Cow position: chr6:56376490-56376342 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 21-172
Cow position: chr6:15046233-15046070 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 9

Conread position: 21-175
Cow position: chr6:12387464-12387313 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 127
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 106, 0

Conread position: 21-175
Cow position: chr6:54807083-54807241 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 137

Conread position: 21-176
Cow position: chr6:1890986-1890831 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 59

Conread position: 21-177
Cow position: chr6:55842302-55842141 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 35

Conread position: 21-183
Cow position: chr6:54144161-54144328 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 21-186
Cow position: chr6:30474183-30474345 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 23, 45

Conread position: 21-186
Cow position: chr6:55475106-55475277 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 21-189
Cow position: chr6:24649710-24649882 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 67

Conread position: 21-196
Cow position: chr6:22968937-22969115 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 22, 121

Conread position: 21-196
Cow position: chr6:44511100-44511278 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 111

Conread position: 21-202
Cow position: chr6:30160179-30160364 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 22, 115

Conread position: 21-204
Cow position: chr6:9026377-9026564 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 127, 0

Conread position: 21-204
Cow position: chr6:24515333-24515158 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 21-204
Cow position: chr6:47204333-47204520 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 21-204
Cow position: chr6:58315906-58316089 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 159, 169

Conread position: 21-207
Cow position: chr6:49685445-49685629 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 184, 61

Conread position: 21-211
Cow position: chr6:33851931-33851747 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 155, 50

Conread position: 21-216
Cow position: chr6:28080037-28079846 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 190, 24

Conread position: 22-176
Cow position: chr6:37739047-37739202 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 143

Conread position: 22-196
Cow position: chr6:19427310-19427489 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 0

Conread position: 22-204
Cow position: chr6:28084154-28083975 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 74

Conread position: 23-182
Cow position: chr6:64431801-64431955 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 72

Conread position: 23-188
Cow position: chr6:20230964-20230805 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 38

Conread position: 23-195
Cow position: chr6:11169567-11169731 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 141, 67

Conread position: 23-195
Cow position: chr6:12543071-12542899 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 73

Conread position: 23-195
Cow position: chr6:61137233-61137406 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 82

Conread position: 23-204
Cow position: chr6:18582947-18582767 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 16

Conread position: 23-217
Cow position: chr6:48807133-48806939 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 181, 13

Conread position: 24-176
Cow position: chr6:60057793-60057637 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 83, 66

Conread position: 24-204
Cow position: chr6:47574768-47574946 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 81

Conread position: 25-167
Cow position: chr6:65852679-65852541 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 25-176
Cow position: chr6:48573015-48572869 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 25-183
Cow position: chr6:57164290-57164447 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 78, 84

Conread position: 25-194
Cow position: chr6:17313599-17313765 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 5

Conread position: 26-194
Cow position: chr6:36652284-36652451 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 26-194
Cow position: chr6:53731386-53731554 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 81, 52

Conread position: 26-204
Cow position: chr6:53673728-53673904 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 29

Conread position: 28-182
Cow position: chr6:59588543-59588385 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 31

Conread position: 30-196
Cow position: chr6:58073917-58074082 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 146, 79

Conread position: 32-221
Cow position: chr6:37053871-37054063 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 153

Conread position: 32-221
Cow position: chr6:52401729-52401919 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 161

Conread position: 33-195
Cow position: chr6:66874223-66874383 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 137, 40

Conread position: 34-202
Cow position: chr6:57405256-57405079 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 48

Conread position: 34-204
Cow position: chr6:18968906-18968740 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 44

Conread position: 34-204
Cow position: chr6:31635816-31635648 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 50

Conread position: 34-216
Cow position: chr6:17669168-17669351 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 138, 100

Conread position: 35-171
Cow position: chr6:61322484-61322618 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 35-176
Cow position: chr6:40104609-40104750 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 129

Conread position: 35-188
Cow position: chr6:31425685-31425535 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 65

Conread position: 35-195
Cow position: chr6:52412732-52412892 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 61

Conread position: 35-196
Cow position: chr6:3545569-3545727 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 57

Conread position: 35-204
Cow position: chr6:38453908-38453730 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 108

Conread position: 38-195
Cow position: chr6:6731144-6731296 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 97

Conread position: 39-175
Cow position: chr6:7173875-7173739 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 42-177
Cow position: chr6:16634337-16634202 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 44-202
Cow position: chr6:12845262-12845426 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 45-184
Cow position: chr6:10237158-10237017 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 45-204
Cow position: chr6:67950837-67950995 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 63

Conread position: 58-189
Cow position: chr6:61218133-61217999 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 63-186
Cow position: chr6:4164267-4164144 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 20

Conread position: 66-204
Cow position: chr6:56860454-56860587 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 72-179
Cow position: chr6:15025978-15025870 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 0

Show alignments to all cow chromosomes.