Cow genome map

Conread name: Pig4-TMW8019J06

Conread position: 3-185
Cow position: chr9:2113780-2113960 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 7

Conread position: 3-196
Cow position: chr9:8600560-8600363 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 33, 7

Conread position: 8-204
Cow position: chr9:32816912-32817113 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 162
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 79, 0

Conread position: 10-179
Cow position: chr9:44552967-44552793 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 10-181
Cow position: chr9:16745898-16745723 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 10-186
Cow position: chr9:19637418-19637592 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 51

Conread position: 10-195
Cow position: chr9:50667644-50667459 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 99

Conread position: 10-196
Cow position: chr9:8951123-8950941 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 25

Conread position: 10-202
Cow position: chr9:21888389-21888191 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 97, 80

Conread position: 11-178
Cow position: chr9:32625217-32625059 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 154, 32

Conread position: 11-183
Cow position: chr9:30189319-30189143 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 70

Conread position: 11-188
Cow position: chr9:9957039-9956869 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 161, 39

Conread position: 11-192
Cow position: chr9:3724842-3725024 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 101, 153

Conread position: 11-192
Cow position: chr9:34310253-34310064 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 11-196
Cow position: chr9:11201808-11201626 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 59

Conread position: 11-196
Cow position: chr9:39152459-39152646 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 88

Conread position: 11-204
Cow position: chr9:39428577-39428771 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 83

Conread position: 11-204
Cow position: chr9:43912148-43911957 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 70

Conread position: 12-203
Cow position: chr9:9200507-9200694 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 117, 0

Conread position: 16-214
Cow position: chr9:42172977-42173181 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 141

Conread position: 18-188
Cow position: chr9:54437473-54437308 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 21-143
Cow position: chr9:10678412-10678291 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 22

Conread position: 21-163
Cow position: chr9:20839823-20839684 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 120
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 21-169
Cow position: chr9:25469241-25469101 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 21-172
Cow position: chr9:46227085-46226928 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 21-177
Cow position: chr9:44217971-44217818 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 108

Conread position: 21-177
Cow position: chr9:51311878-51311722 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 21-177
Cow position: chr9:58669590-58669428 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 21-179
Cow position: chr9:11102606-11102764 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 133
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 155, 92

Conread position: 21-179
Cow position: chr9:47264009-47264164 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 60

Conread position: 21-181
Cow position: chr9:32732477-32732639 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 31

Conread position: 21-182
Cow position: chr9:34093216-34093388 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 21-183
Cow position: chr9:59924752-59924591 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 21-185
Cow position: chr9:5029724-5029557 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 21-185
Cow position: chr9:5071397-5071555 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 21-185
Cow position: chr9:19382532-19382373 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 155, 15

Conread position: 21-186
Cow position: chr9:10127459-10127628 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 21-186
Cow position: chr9:18093454-18093623 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 21-189
Cow position: chr9:14184884-14184705 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 21-196
Cow position: chr9:11364101-11363928 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 9

Conread position: 21-202
Cow position: chr9:31886206-31886388 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 142

Conread position: 21-204
Cow position: chr9:15006542-15006725 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 113

Conread position: 21-204
Cow position: chr9:23527587-23527761 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 131, 34

Conread position: 21-204
Cow position: chr9:24399477-24399656 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 152, 98

Conread position: 21-204
Cow position: chr9:29108747-29108565 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 160, 0

Conread position: 21-204
Cow position: chr9:31587888-31588074 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 21-204
Cow position: chr9:50544424-50544602 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 159, 20

Conread position: 21-204
Cow position: chr9:56861227-56861034 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 21-206
Cow position: chr9:12356065-12355880 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 63, 89

Conread position: 21-214
Cow position: chr9:1952060-1952251 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 86, 63

Conread position: 22-173
Cow position: chr9:8612495-8612339 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 22-173
Cow position: chr9:8914474-8914324 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 100

Conread position: 22-182
Cow position: chr9:5141288-5141130 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 151, 0

Conread position: 22-200
Cow position: chr9:8740725-8740546 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 41

Conread position: 22-204
Cow position: chr9:3932175-3931989 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 79

Conread position: 22-204
Cow position: chr9:52787329-52787513 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 90, 0

Conread position: 23-171
Cow position: chr9:5327461-5327317 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 23-172
Cow position: chr9:44108620-44108771 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 56

Conread position: 23-181
Cow position: chr9:6225245-6225403 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 87

Conread position: 23-181
Cow position: chr9:26555999-26556156 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 38

Conread position: 23-182
Cow position: chr9:18002742-18002903 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 60

Conread position: 23-188
Cow position: chr9:42998260-42998423 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 86

Conread position: 23-195
Cow position: chr9:28354725-28354556 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 23-195
Cow position: chr9:42498036-42497859 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 23-196
Cow position: chr9:30020186-30020004 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 99

Conread position: 23-197
Cow position: chr9:32812555-32812377 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 89

Conread position: 23-204
Cow position: chr9:46316581-46316754 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 20

Conread position: 23-212
Cow position: chr9:30749378-30749569 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 87

Conread position: 24-185
Cow position: chr9:43814648-43814489 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 48

Conread position: 24-195
Cow position: chr9:17871901-17872072 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 37

Conread position: 24-196
Cow position: chr9:32848097-32847922 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 73

Conread position: 24-202
Cow position: chr9:49417193-49417010 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 77, 85

Conread position: 25-177
Cow position: chr9:214264-214410 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 145, 5

Conread position: 25-192
Cow position: chr9:29825241-29825076 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 25-195
Cow position: chr9:5763430-5763595 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 25-196
Cow position: chr9:18110660-18110833 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 97, 0

Conread position: 26-177
Cow position: chr9:17806200-17806050 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 144, 0

Conread position: 26-194
Cow position: chr9:44710029-44709864 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 83

Conread position: 26-195
Cow position: chr9:10980912-10981084 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 75

Conread position: 27-179
Cow position: chr9:46242061-46242216 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 30-185
Cow position: chr9:48133929-48133771 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 129
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 30-204
Cow position: chr9:52633295-52633467 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 149, 0

Conread position: 34-161
Cow position: chr9:64007669-64007794 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 35-186
Cow position: chr9:27052142-27052294 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 0

Conread position: 35-189
Cow position: chr9:26828630-26828781 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 73, 101

Conread position: 35-196
Cow position: chr9:56253092-56252931 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 142, 54

Conread position: 35-197
Cow position: chr9:38546609-38546447 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 138, 87

Conread position: 35-204
Cow position: chr9:42901239-42901074 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 141, 45

Conread position: 37-224
Cow position: chr9:30124113-30123927 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 47

Conread position: 40-177
Cow position: chr9:41453663-41453526 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 130

Conread position: 43-186
Cow position: chr9:9823319-9823461 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 54

Conread position: 43-196
Cow position: chr9:34106909-34106760 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 114, 0

Conread position: 43-197
Cow position: chr9:5575506-5575352 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 127, 146

Conread position: 46-171
Cow position: chr9:23443743-23443619 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 46-171
Cow position: chr9:23450694-23450570 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 57-186
Cow position: chr9:41957977-41957849 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 39

Conread position: 77-196
Cow position: chr9:34204283-34204166 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 97-211
Cow position: chr9:15034042-15033924 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 57

Show alignments to all cow chromosomes.