Cow genome map

Conread name: Pig4-TMW8019L08

Conread position: 10-159
Cow position: chr13:24767565-24767413 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 103

Conread position: 10-180
Cow position: chr13:57745923-57746096 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 10-184
Cow position: chr13:23586299-23586121 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 10-186
Cow position: chr13:24280422-24280247 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 85

Conread position: 10-189
Cow position: chr13:56673789-56673975 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 33, 10

Conread position: 10-193
Cow position: chr13:21039422-21039607 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 67, 160

Conread position: 10-204
Cow position: chr13:11767866-11768059 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 112, 0

Conread position: 11-170
Cow position: chr13:41359924-41359761 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 11-173
Cow position: chr13:24539671-24539503 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 11-177
Cow position: chr13:1766943-1766780 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 134
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 11-177
Cow position: chr13:1959184-1959020 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 87

Conread position: 11-179
Cow position: chr13:6945548-6945375 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 0

Conread position: 11-179
Cow position: chr13:50823378-50823544 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 85

Conread position: 11-186
Cow position: chr13:2302662-2302841 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 11-189
Cow position: chr13:60487281-60487464 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 11-192
Cow position: chr13:8245157-8245337 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 82

Conread position: 11-192
Cow position: chr13:34761845-34761671 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 163, 40

Conread position: 11-196
Cow position: chr13:7010644-7010460 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 85

Conread position: 11-197
Cow position: chr13:11834304-11834489 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 25

Conread position: 11-204
Cow position: chr13:4423305-4423504 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 32, 17

Conread position: 11-204
Cow position: chr13:30510234-30510041 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 88

Conread position: 11-204
Cow position: chr13:46284448-46284633 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 109, 34

Conread position: 12-204
Cow position: chr13:17346981-17346791 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 143

Conread position: 20-196
Cow position: chr13:16343849-16343676 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 160, 10

Conread position: 20-205
Cow position: chr13:29814711-29814522 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 54, 44

Conread position: 21-141
Cow position: chr13:11290656-11290774 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 21-167
Cow position: chr13:46458787-46458642 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 21-167
Cow position: chr13:46985177-46985036 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 21-171
Cow position: chr13:46501469-46501316 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 21-172
Cow position: chr13:32717710-32717859 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 21-177
Cow position: chr13:56842728-56842876 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 21-181
Cow position: chr13:18351005-18350844 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 7

Conread position: 21-181
Cow position: chr13:24285727-24285565 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 6

Conread position: 21-187
Cow position: chr13:9803232-9803068 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 31

Conread position: 21-187
Cow position: chr13:46430136-46430304 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 21-188
Cow position: chr13:6759624-6759798 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 21-188
Cow position: chr13:35718969-35719141 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 105

Conread position: 21-189
Cow position: chr13:14717168-14717340 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 78

Conread position: 21-189
Cow position: chr13:35653927-35654096 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 51

Conread position: 21-191
Cow position: chr13:7262558-7262387 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 52

Conread position: 21-195
Cow position: chr13:9125839-9125658 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 21-195
Cow position: chr13:24822602-24822773 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 155, 27

Conread position: 21-196
Cow position: chr13:14378152-14377968 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 85, 40

Conread position: 21-196
Cow position: chr13:33282179-33281997 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 160

Conread position: 21-196
Cow position: chr13:54094971-54094803 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 156, 41

Conread position: 21-204
Cow position: chr13:29631023-29630839 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 94

Conread position: 21-204
Cow position: chr13:34118136-34118321 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 63, 89

Conread position: 21-204
Cow position: chr13:54080639-54080830 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 123

Conread position: 22-171
Cow position: chr13:15281774-15281924 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 8

Conread position: 22-177
Cow position: chr13:22886828-22886986 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 23-180
Cow position: chr13:51940894-51940743 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 125, 38

Conread position: 23-182
Cow position: chr13:17613509-17613348 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 61

Conread position: 23-186
Cow position: chr13:3796308-3796143 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 150

Conread position: 23-188
Cow position: chr13:25531625-25531788 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 23-195
Cow position: chr13:6153616-6153790 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 30

Conread position: 23-195
Cow position: chr13:17114216-17114385 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 52

Conread position: 23-196
Cow position: chr13:9665232-9665052 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 78

Conread position: 23-204
Cow position: chr13:25434966-25435138 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 157, 18

Conread position: 23-204
Cow position: chr13:25926955-25926775 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 85, 61

Conread position: 23-204
Cow position: chr13:38898090-38898262 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 137, 12

Conread position: 24-133
Cow position: chr13:20510198-20510308 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 24-166
Cow position: chr13:21276017-21275878 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 24-175
Cow position: chr13:23816590-23816738 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 47

Conread position: 24-176
Cow position: chr13:20128828-20128673 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 24-195
Cow position: chr13:4420509-4420336 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 83, 68

Conread position: 24-195
Cow position: chr13:45023046-45023218 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 88

Conread position: 24-197
Cow position: chr13:39699970-39699797 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 19, 80

Conread position: 25-151
Cow position: chr13:23444648-23444779 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 25-176
Cow position: chr13:55843644-55843489 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 128
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 87, 0

Conread position: 25-180
Cow position: chr13:23166935-23167089 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 84

Conread position: 25-185
Cow position: chr13:4208653-4208815 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 69

Conread position: 25-191
Cow position: chr13:37516975-37517140 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 84

Conread position: 27-174
Cow position: chr13:54864875-54865018 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 27-188
Cow position: chr13:14227086-14226928 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 140, 28

Conread position: 28-197
Cow position: chr13:12207201-12207032 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 150, 81

Conread position: 29-172
Cow position: chr13:607108-607252 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 78, 55

Conread position: 34-166
Cow position: chr13:661485-661621 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 34-178
Cow position: chr13:5752272-5752418 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 75

Conread position: 34-179
Cow position: chr13:2414182-2414035 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 76

Conread position: 34-186
Cow position: chr13:37558431-37558280 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 54

Conread position: 34-194
Cow position: chr13:60429922-60430080 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 75

Conread position: 35-181
Cow position: chr13:562992-563136 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 35-184
Cow position: chr13:8607372-8607516 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 41

Conread position: 35-192
Cow position: chr13:50739317-50739162 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 135, 0

Conread position: 35-196
Cow position: chr13:52284960-52284801 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 55

Conread position: 35-204
Cow position: chr13:49848072-49847907 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 141, 57

Conread position: 37-190
Cow position: chr13:33160848-33160999 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 27

Conread position: 39-177
Cow position: chr13:26698350-26698489 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 56

Conread position: 39-186
Cow position: chr13:20180564-20180416 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 41-204
Cow position: chr13:33975562-33975403 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 82

Conread position: 44-217
Cow position: chr13:20057314-20057489 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 132, 22

Conread position: 49-204
Cow position: chr13:22075811-22075654 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 56-185
Cow position: chr13:57325971-57326100 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 40

Conread position: 56-196
Cow position: chr13:12745801-12745664 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 41

Conread position: 56-204
Cow position: chr13:34191312-34191457 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 118, 43

Conread position: 57-192
Cow position: chr13:548631-548501 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 72

Show alignments to all cow chromosomes.