Cow genome map
| Conread name: | Pig4-TMW8019L08 |
| Conread position: | 2-186 |
| Cow position: | chr15:28236614-28236789 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 9-172 |
| Cow position: | chr15:9072148-9072311 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-181 |
| Cow position: | chr15:2210853-2210684 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 123, 27 |
| Conread position: | 10-192 |
| Cow position: | chr15:43248491-43248676 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 11-182 |
| Cow position: | chr15:29272470-29272299 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 40, 161 |
| Conread position: | 11-185 |
| Cow position: | chr15:15215299-15215124 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 11-186 |
| Cow position: | chr15:20401635-20401800 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 169, 41 |
| Conread position: | 11-188 |
| Cow position: | chr15:37964820-37964634 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 11-193 |
| Cow position: | chr15:21836968-21836778 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 103, 26 |
| Conread position: | 11-194 |
| Cow position: | chr15:39894867-39894684 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 11-196 |
| Cow position: | chr15:27892285-27892105 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 11-197 |
| Cow position: | chr15:27282084-27281896 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 11-205 |
| Cow position: | chr15:22886828-22886635 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 79, 24 |
| Conread position: | 11-205 |
| Cow position: | chr15:25110885-25111084 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-207 |
| Cow position: | chr15:27732677-27732496 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 162, 66 |
| Conread position: | 11-208 |
| Cow position: | chr15:33680927-33680733 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 169, 81 |
| Conread position: | 11-216 |
| Cow position: | chr15:19279814-19280013 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 194, 96 |
| Conread position: | 20-174 |
| Cow position: | chr15:9928628-9928476 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 21-124 |
| Cow position: | chr15:22607076-22606974 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 92, 42 |
| Conread position: | 21-153 |
| Cow position: | chr15:10189466-10189602 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 21-154 |
| Cow position: | chr15:23139886-23140017 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 34 |
| Conread position: | 21-164 |
| Cow position: | chr15:17683298-17683154 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 21-170 |
| Cow position: | chr15:10845991-10845840 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 86, 69 |
| Conread position: | 21-171 |
| Cow position: | chr15:9642705-9642549 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-171 |
| Cow position: | chr15:39363747-39363894 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 142, 89 |
| Conread position: | 21-178 |
| Cow position: | chr15:53118591-53118433 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 21-181 |
| Cow position: | chr15:20117378-20117219 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 21-184 |
| Cow position: | chr15:44209840-44209673 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 21-189 |
| Cow position: | chr15:31599604-31599433 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 21-189 |
| Cow position: | chr15:31907921-31907748 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 21-189 |
| Cow position: | chr15:36671765-36671936 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 21-192 |
| Cow position: | chr15:4277795-4277965 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 21-192 |
| Cow position: | chr15:5527457-5527281 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 21-194 |
| Cow position: | chr15:22854677-22854500 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-194 |
| Cow position: | chr15:23957972-23957798 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 21-194 |
| Cow position: | chr15:51583493-51583324 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 21-196 |
| Cow position: | chr15:11646219-11646395 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 155, 88 |
| Conread position: | 21-196 |
| Cow position: | chr15:50994015-50993835 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 22, 150 |
| Conread position: | 21-201 |
| Cow position: | chr15:12673913-12673741 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 19, 115 |
| Conread position: | 21-202 |
| Cow position: | chr15:22531330-22531153 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 154, 88 |
| Conread position: | 21-204 |
| Cow position: | chr15:4373744-4373561 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 22, 92 |
| Conread position: | 21-204 |
| Cow position: | chr15:10570349-10570528 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 136, 50 |
| Conread position: | 21-204 |
| Cow position: | chr15:24285254-24285068 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 151 |
| Conread position: | 21-204 |
| Cow position: | chr15:26421327-26421513 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 22-186 |
| Cow position: | chr15:44252631-44252467 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 147, 87 |
| Conread position: | 22-190 |
| Cow position: | chr15:31157383-31157212 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 21, 152 |
| Conread position: | 22-195 |
| Cow position: | chr15:1830833-1830659 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 12, 163 |
| Conread position: | 23-165 |
| Cow position: | chr15:12304908-12304767 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 84, 58 |
| Conread position: | 23-195 |
| Cow position: | chr15:1329832-1330005 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 23-195 |
| Cow position: | chr15:21894049-21893876 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 86 |
| Conread position: | 23-196 |
| Cow position: | chr15:31182692-31182522 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 69 |
| Conread position: | 23-203 |
| Cow position: | chr15:9177946-9178117 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 23-204 |
| Cow position: | chr15:28177730-28177561 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 23-214 |
| Cow position: | chr15:22532508-22532319 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 24-165 |
| Cow position: | chr15:6282666-6282806 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 24-196 |
| Cow position: | chr15:27863057-27863230 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 19, 107 |
| Conread position: | 25-161 |
| Cow position: | chr15:4857054-4856917 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 25-171 |
| Cow position: | chr15:15922258-15922110 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 115 |
| Conread position: | 25-193 |
| Cow position: | chr15:11957806-11957637 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 25-204 |
| Cow position: | chr15:14322798-14322969 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 83 |
| Conread position: | 25-204 |
| Cow position: | chr15:50322860-50322683 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 26-205 |
| Cow position: | chr15:30934287-30934466 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 30-192 |
| Cow position: | chr15:12163259-12163421 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 146, 62 |
| Conread position: | 33-214 |
| Cow position: | chr15:36658878-36659055 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 143, 70 |
| Conread position: | 34-188 |
| Cow position: | chr15:10615481-10615629 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 34-192 |
| Cow position: | chr15:33770873-33770714 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 34-204 |
| Cow position: | chr15:3572444-3572615 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 35-189 |
| Cow position: | chr15:36838925-36839072 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 37-195 |
| Cow position: | chr15:33285134-33284975 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 60 |
| Conread position: | 37-196 |
| Cow position: | chr15:9001213-9001047 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 38-194 |
| Cow position: | chr15:5722415-5722579 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 38-195 |
| Cow position: | chr15:27247763-27247596 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 38-213 |
| Cow position: | chr15:20482589-20482768 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 39-154 |
| Cow position: | chr15:20347499-20347384 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 85 |
| Conread position: | 52-177 |
| Cow position: | chr15:16585747-16585622 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 57-204 |
| Cow position: | chr15:16825065-16824917 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 77-195 |
| Cow position: | chr15:29900318-29900437 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
Show alignments to all cow chromosomes.