Cow genome map
| Conread name: | Pig4-TMW8019L08 |
| Conread position: | 8-192 |
| Cow position: | chr18:26335041-26334855 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 9-170 |
| Cow position: | chr18:17324486-17324653 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 54 |
| Conread position: | 10-186 |
| Cow position: | chr18:21175959-21176139 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 10-204 |
| Cow position: | chr18:19363708-19363907 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 10-204 |
| Cow position: | chr18:19387358-19387546 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 10-216 |
| Cow position: | chr18:4765496-4765293 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 165, 59 |
| Conread position: | 11-173 |
| Cow position: | chr18:25003098-25002941 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 11-176 |
| Cow position: | chr18:11367985-11367818 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 90 |
| Conread position: | 11-189 |
| Cow position: | chr18:22874650-22874832 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 11-196 |
| Cow position: | chr18:34325182-34324991 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 11-199 |
| Cow position: | chr18:10101269-10101457 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 12-186 |
| Cow position: | chr18:23652836-23652671 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 21-174 |
| Cow position: | chr18:23808085-23807933 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 40 |
| Conread position: | 21-174 |
| Cow position: | chr18:31562606-31562454 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 143, 60 |
| Conread position: | 21-177 |
| Cow position: | chr18:4039966-4040121 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 21-177 |
| Cow position: | chr18:23360418-23360577 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 21-182 |
| Cow position: | chr18:4515815-4515976 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 151, 120 |
| Conread position: | 21-183 |
| Cow position: | chr18:41072789-41072952 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 21-184 |
| Cow position: | chr18:43463617-43463458 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 21-185 |
| Cow position: | chr18:13497819-13497648 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 162 |
| Conread position: | 21-186 |
| Cow position: | chr18:16726434-16726600 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 37, 104 |
| Conread position: | 21-186 |
| Cow position: | chr18:24856057-24855894 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 21-191 |
| Cow position: | chr18:22411829-22411655 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 21-196 |
| Cow position: | chr18:23715101-23714924 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 21-196 |
| Cow position: | chr18:36123321-36123502 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 21-204 |
| Cow position: | chr18:29768701-29768888 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 21-204 |
| Cow position: | chr18:32773666-32773846 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 21-204 |
| Cow position: | chr18:35797412-35797591 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 21-204 |
| Cow position: | chr18:38344587-38344776 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 94 |
| Conread position: | 21-204 |
| Cow position: | chr18:51587757-51587575 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 69 |
| Conread position: | 21-205 |
| Cow position: | chr18:39185396-39185580 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-197 |
| Cow position: | chr18:16842277-16842099 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 23-171 |
| Cow position: | chr18:22121092-22120944 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 23-172 |
| Cow position: | chr18:3115249-3115399 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 135 |
| Conread position: | 23-175 |
| Cow position: | chr18:29796634-29796484 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 23-178 |
| Cow position: | chr18:8105154-8105000 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 20 |
| Conread position: | 23-179 |
| Cow position: | chr18:28823179-28823023 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 151 |
| Conread position: | 23-188 |
| Cow position: | chr18:219122-219288 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 23-195 |
| Cow position: | chr18:5995257-5995428 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 23-196 |
| Cow position: | chr18:20127313-20127146 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 105, 71 |
| Conread position: | 23-217 |
| Cow position: | chr18:50382048-50382240 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 147, 73 |
| Conread position: | 24-177 |
| Cow position: | chr18:17334625-17334469 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 25-192 |
| Cow position: | chr18:9806202-9806376 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 25-195 |
| Cow position: | chr18:2864207-2864032 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 25-201 |
| Cow position: | chr18:21939147-21939324 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 97, 143 |
| Conread position: | 26-204 |
| Cow position: | chr18:42060872-42061044 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 70 |
| Conread position: | 30-197 |
| Cow position: | chr18:23424722-23424881 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 34-196 |
| Cow position: | chr18:51500273-51500114 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 138, 89 |
| Conread position: | 34-204 |
| Cow position: | chr18:51298278-51298450 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 35-171 |
| Cow position: | chr18:5570958-5571097 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 35-183 |
| Cow position: | chr18:50700472-50700629 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 36-171 |
| Cow position: | chr18:21930533-21930397 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 37-195 |
| Cow position: | chr18:35749173-35749020 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 83, 99 |
| Conread position: | 38-189 |
| Cow position: | chr18:14586667-14586511 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 129 |
| Conread position: | 38-208 |
| Cow position: | chr18:50566678-50566847 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 138, 22 |
| Conread position: | 41-196 |
| Cow position: | chr18:51412181-51412330 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 43-204 |
| Cow position: | chr18:26535706-26535540 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 59-192 |
| Cow position: | chr18:23487851-23487983 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 66-192 |
| Cow position: | chr18:5755814-5755937 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 71-178 |
| Cow position: | chr18:24364209-24364102 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.