Cow genome map
| Conread name: | Pig4-TMW8019L08 |
| Conread position: | 3-176 |
| Cow position: | chr19:56018732-56018559 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 7 |
| Conread position: | 8-158 |
| Cow position: | chr19:25637704-25637551 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 35, 104 |
| Conread position: | 8-192 |
| Cow position: | chr19:47109835-47110020 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 168, 104 |
| Conread position: | 8-204 |
| Cow position: | chr19:1713347-1713151 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 168, 136 |
| Conread position: | 9-181 |
| Cow position: | chr19:16566953-16567121 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 77 |
| Conread position: | 10-196 |
| Cow position: | chr19:18788306-18788123 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 11-186 |
| Cow position: | chr19:36977117-36976939 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 11-187 |
| Cow position: | chr19:2821377-2821557 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 11-192 |
| Cow position: | chr19:28921622-28921804 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 11-192 |
| Cow position: | chr19:36461728-36461551 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 73, 100 |
| Conread position: | 11-195 |
| Cow position: | chr19:31613910-31614092 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 23, 86 |
| Conread position: | 11-196 |
| Cow position: | chr19:15936636-15936819 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 111 |
| Conread position: | 11-218 |
| Cow position: | chr19:42647262-42647050 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 21-171 |
| Cow position: | chr19:39876709-39876561 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 91, 38 |
| Conread position: | 21-172 |
| Cow position: | chr19:36380054-36380203 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 21-173 |
| Cow position: | chr19:43517045-43517193 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 21-176 |
| Cow position: | chr19:22168323-22168481 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 13, 150 |
| Conread position: | 21-177 |
| Cow position: | chr19:22863853-22863696 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 125 |
| Conread position: | 21-177 |
| Cow position: | chr19:35782324-35782167 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 21-179 |
| Cow position: | chr19:15796477-15796632 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 21-179 |
| Cow position: | chr19:41212243-41212083 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 21-186 |
| Cow position: | chr19:9387442-9387609 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 21-188 |
| Cow position: | chr19:9704021-9703862 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 21-194 |
| Cow position: | chr19:7029724-7029899 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 32 |
| Conread position: | 21-195 |
| Cow position: | chr19:31381188-31381013 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 13, 115 |
| Conread position: | 21-196 |
| Cow position: | chr19:44489900-44490079 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 21-203 |
| Cow position: | chr19:44366836-44367011 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 155, 40 |
| Conread position: | 21-204 |
| Cow position: | chr19:21285276-21285088 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 159 |
| Conread position: | 21-204 |
| Cow position: | chr19:33306113-33306300 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 21-204 |
| Cow position: | chr19:55236302-55236482 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 152, 15 |
| Conread position: | 21-207 |
| Cow position: | chr19:54225489-54225313 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 22-192 |
| Cow position: | chr19:19661852-19662025 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 22-195 |
| Cow position: | chr19:48478784-48478962 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 22-204 |
| Cow position: | chr19:19924794-19924608 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 22-204 |
| Cow position: | chr19:53738145-53738328 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 150 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 23-139 |
| Cow position: | chr19:24956631-24956518 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 23-169 |
| Cow position: | chr19:22134334-22134188 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 85 |
| Conread position: | 23-178 |
| Cow position: | chr19:6531702-6531855 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 84 |
| Conread position: | 23-179 |
| Cow position: | chr19:14347823-14347981 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 23-181 |
| Cow position: | chr19:20661605-20661441 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 23-181 |
| Cow position: | chr19:22765428-22765591 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 23-193 |
| Cow position: | chr19:10171812-10171984 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 72 |
| Conread position: | 23-195 |
| Cow position: | chr19:6417406-6417577 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 125, 85 |
| Conread position: | 23-195 |
| Cow position: | chr19:31595110-31595281 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 87, 67 |
| Conread position: | 23-195 |
| Cow position: | chr19:47727760-47727593 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 151, 14 |
| Conread position: | 24-204 |
| Cow position: | chr19:2589318-2589498 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 66 |
| Conread position: | 26-186 |
| Cow position: | chr19:8839417-8839576 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 26-193 |
| Cow position: | chr19:6881064-6880893 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 48 |
| Conread position: | 26-200 |
| Cow position: | chr19:35380735-35380559 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 73 |
| Conread position: | 27-204 |
| Cow position: | chr19:38907540-38907366 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 149, 28 |
| Conread position: | 28-175 |
| Cow position: | chr19:33260844-33260993 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 82, 117 |
| Conread position: | 29-174 |
| Cow position: | chr19:5279687-5279830 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 30-188 |
| Cow position: | chr19:2342299-2342457 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-203 |
| Cow position: | chr19:27346822-27346660 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 34-196 |
| Cow position: | chr19:19673235-19673398 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 139 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 34-197 |
| Cow position: | chr19:3246228-3246059 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 112, 74 |
| Conread position: | 34-204 |
| Cow position: | chr19:7884405-7884569 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 35-167 |
| Cow position: | chr19:22668057-22668188 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 35-185 |
| Cow position: | chr19:24137085-24137231 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 35-189 |
| Cow position: | chr19:2771190-2771036 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-194 |
| Cow position: | chr19:21335789-21335626 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 131 |
| Conread position: | 35-204 |
| Cow position: | chr19:25271593-25271425 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 37-175 |
| Cow position: | chr19:51536392-51536530 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 53, 83 |
| Conread position: | 38-187 |
| Cow position: | chr19:1402981-1402833 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 104, 23 |
| Conread position: | 39-204 |
| Cow position: | chr19:33281192-33281348 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 151, 93 |
| Conread position: | 41-187 |
| Cow position: | chr19:39986717-39986569 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 41-190 |
| Cow position: | chr19:31826930-31827076 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 134, 48 |
| Conread position: | 41-204 |
| Cow position: | chr19:35064362-35064197 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 97, 157 |
| Conread position: | 62-195 |
| Cow position: | chr19:29353041-29353179 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.