Cow genome map
| Conread name: | Pig4-TMW8019L08 |
| Conread position: | 10-204 |
| Cow position: | chr23:2371186-2371377 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 159, 86 |
| Conread position: | 10-204 |
| Cow position: | chr23:20781635-20781825 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 11-186 |
| Cow position: | chr23:16237448-16237264 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 11-196 |
| Cow position: | chr23:14126384-14126565 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 167, 116 |
| Conread position: | 11-204 |
| Cow position: | chr23:16058411-16058598 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 12-191 |
| Cow position: | chr23:40862152-40862338 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 18-204 |
| Cow position: | chr23:11434442-11434254 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 11, 118 |
| Conread position: | 21-129 |
| Cow position: | chr23:16793419-16793529 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 21-165 |
| Cow position: | chr23:31897550-31897693 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 125, 63 |
| Conread position: | 21-171 |
| Cow position: | chr23:3745426-3745580 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-171 |
| Cow position: | chr23:7321979-7321832 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 71 |
| Conread position: | 21-178 |
| Cow position: | chr23:10415204-10415049 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 21-179 |
| Cow position: | chr23:22588448-22588287 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 147 |
| Conread position: | 21-179 |
| Cow position: | chr23:36146633-36146479 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 21-185 |
| Cow position: | chr23:40651640-40651478 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 91 |
| Conread position: | 21-186 |
| Cow position: | chr23:30210523-30210356 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 21-189 |
| Cow position: | chr23:23470764-23470926 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 155, 15 |
| Conread position: | 21-189 |
| Cow position: | chr23:31607337-31607162 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 15, 148 |
| Conread position: | 21-189 |
| Cow position: | chr23:40891183-40891349 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 21-191 |
| Cow position: | chr23:30773857-30773687 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 39, 35 |
| Conread position: | 21-196 |
| Cow position: | chr23:7221192-7221016 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 121 |
| Conread position: | 21-196 |
| Cow position: | chr23:19636442-19636264 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 21-196 |
| Cow position: | chr23:21866566-21866737 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 21-196 |
| Cow position: | chr23:32662397-32662575 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 20, 64 |
| Conread position: | 21-196 |
| Cow position: | chr23:35177140-35177315 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 21-196 |
| Cow position: | chr23:37224244-37224071 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 22, 90 |
| Conread position: | 21-202 |
| Cow position: | chr23:30585840-30585663 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 21-204 |
| Cow position: | chr23:21659759-21659949 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-204 |
| Cow position: | chr23:41590089-41589912 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 22-146 |
| Cow position: | chr23:5515790-5515916 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 68 |
| Conread position: | 22-189 |
| Cow position: | chr23:20752835-20753004 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 38, 34 |
| Conread position: | 22-195 |
| Cow position: | chr23:39752942-39753110 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 23-168 |
| Cow position: | chr23:30656350-30656206 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 23-171 |
| Cow position: | chr23:1924012-1923866 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 23-175 |
| Cow position: | chr23:9734238-9734390 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 84, 55 |
| Conread position: | 23-178 |
| Cow position: | chr23:18296631-18296787 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 60, 87 |
| Conread position: | 23-192 |
| Cow position: | chr23:25407628-25407456 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 23-193 |
| Cow position: | chr23:5723367-5723537 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 51, 87 |
| Conread position: | 23-195 |
| Cow position: | chr23:186998-187172 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 89 |
| Conread position: | 23-204 |
| Cow position: | chr23:1068489-1068313 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 86 |
| Conread position: | 24-179 |
| Cow position: | chr23:16700217-16700060 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 140 |
| Conread position: | 24-183 |
| Cow position: | chr23:37065662-37065826 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 25-178 |
| Cow position: | chr23:24867128-24867284 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 25-196 |
| Cow position: | chr23:28895142-28894959 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 25-217 |
| Cow position: | chr23:10014366-10014557 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 181, 13 |
| Conread position: | 33-215 |
| Cow position: | chr23:12369549-12369368 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 34-169 |
| Cow position: | chr23:6592868-6592730 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 34-183 |
| Cow position: | chr23:22660744-22660601 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 34-194 |
| Cow position: | chr23:36309256-36309415 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 35-186 |
| Cow position: | chr23:15872861-15872709 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 35-205 |
| Cow position: | chr23:9711748-9711573 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 39-183 |
| Cow position: | chr23:18492011-18492150 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 52, 97 |
| Conread position: | 43-192 |
| Cow position: | chr23:6031725-6031867 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 132, 49 |
| Conread position: | 61-171 |
| Cow position: | chr23:38058484-38058375 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 63-188 |
| Cow position: | chr23:496513-496387 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 70-203 |
| Cow position: | chr23:35374090-35373951 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.