Cow genome map
| Conread name: | Pig4-TMW8019L08 |
| Conread position: | 9-204 |
| Cow position: | chr28:21570001-21570196 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 10-175 |
| Cow position: | chr28:28590553-28590716 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 10-176 |
| Cow position: | chr28:16204518-16204346 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 104 |
| Conread position: | 10-177 |
| Cow position: | chr28:18462798-18462631 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 10-199 |
| Cow position: | chr28:23621362-23621546 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 11-180 |
| Cow position: | chr28:31871933-31871763 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 11-186 |
| Cow position: | chr28:11501076-11500897 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 11-186 |
| Cow position: | chr28:15082110-15081933 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 11-192 |
| Cow position: | chr28:10035216-10035388 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 161, 11 |
| Conread position: | 11-217 |
| Cow position: | chr28:21873588-21873794 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 160, 65 |
| Conread position: | 12-197 |
| Cow position: | chr28:15498400-15498207 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 18-188 |
| Cow position: | chr28:12942198-12942371 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 19-182 |
| Cow position: | chr28:34150704-34150541 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-171 |
| Cow position: | chr28:23231242-23231090 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 21-171 |
| Cow position: | chr28:26982921-26982762 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 21-177 |
| Cow position: | chr28:29455831-29455676 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 21-192 |
| Cow position: | chr28:25563902-25564078 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 35, 82 |
| Conread position: | 21-194 |
| Cow position: | chr28:9822148-9821969 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 21-195 |
| Cow position: | chr28:16253032-16252860 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 33 |
| Conread position: | 21-196 |
| Cow position: | chr28:18934281-18934451 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 154, 76 |
| Conread position: | 21-204 |
| Cow position: | chr28:11007002-11007204 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-216 |
| Cow position: | chr28:2814674-2814486 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 155, 75 |
| Conread position: | 21-217 |
| Cow position: | chr28:10642192-10641994 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 154, 68 |
| Conread position: | 22-190 |
| Cow position: | chr28:14493367-14493536 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 23-177 |
| Cow position: | chr28:5144694-5144539 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 114 |
| Conread position: | 23-180 |
| Cow position: | chr28:29392830-29392996 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 130 |
| Conread position: | 23-192 |
| Cow position: | chr28:26264631-26264802 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 23-193 |
| Cow position: | chr28:14720950-14720782 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 23-193 |
| Cow position: | chr28:15044031-15043867 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 134, 20 |
| Conread position: | 23-195 |
| Cow position: | chr28:3914537-3914712 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 44, 91 |
| Conread position: | 23-195 |
| Cow position: | chr28:10745037-10745210 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 54 |
| Conread position: | 24-178 |
| Cow position: | chr28:26784638-26784483 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 64, 87 |
| Conread position: | 24-193 |
| Cow position: | chr28:14218654-14218477 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 25-175 |
| Cow position: | chr28:2752666-2752517 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 83, 5 |
| Conread position: | 31-186 |
| Cow position: | chr28:4763713-4763866 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 145, 25 |
| Conread position: | 34-171 |
| Cow position: | chr28:30978116-30978248 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 34-179 |
| Cow position: | chr28:18760208-18760064 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 131, 56 |
| Conread position: | 34-182 |
| Cow position: | chr28:6971505-6971366 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 34-202 |
| Cow position: | chr28:31971917-31971750 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 96, 58 |
| Conread position: | 35-177 |
| Cow position: | chr28:28414512-28414654 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-195 |
| Cow position: | chr28:19023976-19024141 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 35-204 |
| Cow position: | chr28:13693590-13693760 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 35-204 |
| Cow position: | chr28:20963688-20963524 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 38-176 |
| Cow position: | chr28:17625290-17625152 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-195 |
| Cow position: | chr28:26901228-26901071 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 138, 106 |
| Conread position: | 41-196 |
| Cow position: | chr28:33285267-33285113 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 51 |
| Conread position: | 42-192 |
| Cow position: | chr28:15577414-15577263 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 43-196 |
| Cow position: | chr28:23007886-23007733 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 131, 65 |
Show alignments to all cow chromosomes.