Cow genome map
| Conread name: | Pig4-TMW8022I05 |
| Conread position: | 33-736 |
| Cow position: | chr1:5162619-5161925 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 12 |
| Conread position: | 35-502 |
| Cow position: | chr1:13250839-13250388 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 9 |
| Conread position: | 35-502 |
| Cow position: | chr1:57362624-57362173 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 8 |
| Conread position: | 35-502 |
| Cow position: | chr1:66971463-66971013 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 9 |
| Conread position: | 35-613 |
| Cow position: | chr1:32562830-32562275 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 9 |
| Conread position: | 35-615 |
| Cow position: | chr1:65390270-65390824 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 9 |
| Conread position: | 35-660 |
| Cow position: | chr1:12057545-12056944 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 9 |
| Conread position: | 35-660 |
| Cow position: | chr1:26811366-26810752 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 9 |
| Conread position: | 35-660 |
| Cow position: | chr1:100708237-100707648 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 9 |
| Conread position: | 35-668 |
| Cow position: | chr1:54199931-54199326 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 9 |
| Conread position: | 39-634 |
| Cow position: | chr1:9512672-9512082 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 406 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 44-595 |
| Cow position: | chr1:27494954-27495469 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 364 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 299, 89 |
| Conread position: | 44-628 |
| Cow position: | chr1:44164535-44165099 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 44-637 |
| Cow position: | chr1:43353193-43352632 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 92 |
| Conread position: | 44-732 |
| Cow position: | chr1:53308942-53308268 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 93 |
| Conread position: | 44-790 |
| Cow position: | chr1:20001292-20000555 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 41 |
| Conread position: | 45-507 |
| Cow position: | chr1:99105431-99104982 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 215, 91 |
| Conread position: | 45-614 |
| Cow position: | chr1:14528750-14528193 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 91 |
| Conread position: | 45-632 |
| Cow position: | chr1:16973396-16972821 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 31 |
| Conread position: | 45-696 |
| Cow position: | chr1:12871567-12870925 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 45-734 |
| Cow position: | chr1:29915870-29916538 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 96 |
| Conread position: | 45-781 |
| Cow position: | chr1:41736156-41735446 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 96 |
| Conread position: | 45-782 |
| Cow position: | chr1:71135603-71136324 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 236 |
| Conread position: | 45-791 |
| Cow position: | chr1:82378247-82378974 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 91 |
| Conread position: | 45-798 |
| Cow position: | chr1:97622752-97622030 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 92 |
| Conread position: | 45-799 |
| Cow position: | chr1:20098804-20099557 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 128 |
| Conread position: | 49-722 |
| Cow position: | chr1:6795488-6794811 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 94 |
| Conread position: | 52-651 |
| Cow position: | chr1:14561494-14560905 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 119 |
| Conread position: | 53-668 |
| Cow position: | chr1:71939059-71938455 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 230 |
| Conread position: | 56-634 |
| Cow position: | chr1:73522666-73522128 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 45 |
| Conread position: | 56-712 |
| Cow position: | chr1:26702729-26702101 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 428, 87 |
| Conread position: | 58-547 |
| Cow position: | chr1:43893389-43893861 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 85 |
| Conread position: | 60-646 |
| Cow position: | chr1:76223219-76222657 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 83 |
| Conread position: | 63-593 |
| Cow position: | chr1:41696536-41697040 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 73 |
| Conread position: | 65-649 |
| Cow position: | chr1:97422825-97422261 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 16 |
| Conread position: | 68-790 |
| Cow position: | chr1:72012326-72011621 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 75 |
| Conread position: | 74-502 |
| Cow position: | chr1:31719973-31720386 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 80-709 |
| Cow position: | chr1:1825281-1825884 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 148-712 |
| Cow position: | chr1:81356154-81355597 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 159-570 |
| Cow position: | chr1:89937795-89937398 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 60 |
| Conread position: | 159-595 |
| Cow position: | chr1:665935-666348 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 48 |
| Conread position: | 159-661 |
| Cow position: | chr1:99808171-99807670 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 117 |
| Conread position: | 159-714 |
| Cow position: | chr1:101822932-101822406 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 48 |
| Conread position: | 159-778 |
| Cow position: | chr1:13056953-13056365 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 6 |
| Conread position: | 159-790 |
| Cow position: | chr1:25183677-25184293 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 48 |
| Conread position: | 159-800 |
| Cow position: | chr1:66356151-66355522 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 117 |
| Conread position: | 159-800 |
| Cow position: | chr1:95017953-95017349 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 111 |
| Conread position: | 160-664 |
| Cow position: | chr1:78091597-78092086 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 59 |
| Conread position: | 167-760 |
| Cow position: | chr1:80974056-80973453 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 58 |
| Conread position: | 167-792 |
| Cow position: | chr1:28678080-28678707 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 25 |
| Conread position: | 170-791 |
| Cow position: | chr1:46218149-46218752 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 106 |
| Conread position: | 171-712 |
| Cow position: | chr1:10778150-10778669 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 36 |
| Conread position: | 171-732 |
| Cow position: | chr1:4441527-4440998 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 36 |
| Conread position: | 172-558 |
| Cow position: | chr1:81569459-81569084 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 48 |
| Conread position: | 172-772 |
| Cow position: | chr1:81161589-81162178 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 103 |
| Conread position: | 177-661 |
| Cow position: | chr1:63391190-63390721 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 30 |
| Conread position: | 179-528 |
| Cow position: | chr1:37306684-37306330 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 96 |
| Conread position: | 187-501 |
| Cow position: | chr1:36270919-36270595 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 132, 90 |
| Conread position: | 187-557 |
| Cow position: | chr1:99614040-99614398 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 154, 9 |
| Conread position: | 202-788 |
| Cow position: | chr1:23041178-23041743 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 80 |
| Conread position: | 203-787 |
| Cow position: | chr1:35844325-35843743 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 211-613 |
| Cow position: | chr1:7800224-7800614 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 64 |
| Conread position: | 214-597 |
| Cow position: | chr1:50634799-50634415 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 214-734 |
| Cow position: | chr1:94526108-94526623 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 57 |
| Conread position: | 214-739 |
| Cow position: | chr1:10719877-10719349 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 61 |
| Conread position: | 216-514 |
| Cow position: | chr1:55043413-55043123 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 124, 12 |
| Conread position: | 217-647 |
| Cow position: | chr1:93858587-93859002 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 287 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 124, 11 |
| Conread position: | 220-725 |
| Cow position: | chr1:58889674-58889178 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 55 |
| Conread position: | 220-785 |
| Cow position: | chr1:3657747-3657189 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 55 |
| Conread position: | 227-738 |
| Cow position: | chr1:69695382-69694860 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 350 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 228-790 |
| Cow position: | chr1:7657692-7657137 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 49 |
| Conread position: | 233-664 |
| Cow position: | chr1:91817139-91816722 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 379, 42 |
| Conread position: | 234-634 |
| Cow position: | chr1:1403830-1403462 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 237-614 |
| Cow position: | chr1:90095855-90095492 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 38 |
| Conread position: | 240-756 |
| Cow position: | chr1:78751063-78750552 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 35 |
| Conread position: | 240-758 |
| Cow position: | chr1:89834874-89835404 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 35 |
| Conread position: | 246-626 |
| Cow position: | chr1:22467573-22467948 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 262 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 94, 29 |
| Conread position: | 250-737 |
| Cow position: | chr1:85652114-85651651 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 25 |
| Conread position: | 255-804 |
| Cow position: | chr1:63503995-63504525 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 15 |
| Conread position: | 263-647 |
| Cow position: | chr1:81913487-81913119 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 264-558 |
| Cow position: | chr1:23488847-23488560 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 234, 11 |
| Conread position: | 266-790 |
| Cow position: | chr1:57119678-57119165 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 275-630 |
| Cow position: | chr1:57901064-57900726 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 159, 73 |
| Conread position: | 283-502 |
| Cow position: | chr1:98906620-98906405 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 58, 102 |
| Conread position: | 292-790 |
| Cow position: | chr1:26688789-26688290 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 44 |
| Conread position: | 293-661 |
| Cow position: | chr1:63435112-63434760 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 48, 90 |
| Conread position: | 293-780 |
| Cow position: | chr1:21934488-21934011 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 18 |
| Conread position: | 307-756 |
| Cow position: | chr1:77132309-77132749 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 305 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 310-789 |
| Cow position: | chr1:42554978-42555443 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 315-687 |
| Cow position: | chr1:7731440-7731805 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 25 |
| Conread position: | 317-595 |
| Cow position: | chr1:34000620-34000893 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 317-609 |
| Cow position: | chr1:19998315-19998040 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 260, 11 |
| Conread position: | 320-647 |
| Cow position: | chr1:60907079-60907409 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 322-800 |
| Cow position: | chr1:22777833-22777351 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 66 |
| Conread position: | 327-800 |
| Cow position: | chr1:10064251-10063794 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 314 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 143, 27 |
| Conread position: | 329-576 |
| Cow position: | chr1:90864572-90864328 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 332-712 |
| Cow position: | chr1:61742238-61741862 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 332-725 |
| Cow position: | chr1:73196510-73196111 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 9, 47 |
| Conread position: | 332-802 |
| Cow position: | chr1:3924061-3923591 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 333, 11 |
| Conread position: | 335-670 |
| Cow position: | chr1:197268-196950 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 129, 50 |
| Conread position: | 335-798 |
| Cow position: | chr1:83747677-83748135 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 336-501 |
| Cow position: | chr1:59557457-59557620 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 336-599 |
| Cow position: | chr1:77657801-77658056 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 255, 42 |
| Conread position: | 336-709 |
| Cow position: | chr1:86325876-86325503 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 326, 49 |
| Conread position: | 336-735 |
| Cow position: | chr1:6881490-6881107 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 337-802 |
| Cow position: | chr1:90423350-90422890 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 45 |
| Conread position: | 338-518 |
| Cow position: | chr1:21954481-21954306 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 170, 53 |
| Conread position: | 340-712 |
| Cow position: | chr1:55146538-55146902 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 268 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 14, 53 |
| Conread position: | 340-753 |
| Cow position: | chr1:77118791-77118384 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 299 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 341-626 |
| Cow position: | chr1:56408353-56408630 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 341-670 |
| Cow position: | chr1:32244659-32244344 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 44 |
| Conread position: | 341-723 |
| Cow position: | chr1:2765157-2765529 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 37 |
| Conread position: | 341-726 |
| Cow position: | chr1:30413325-30413709 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 135 |
| Conread position: | 341-756 |
| Cow position: | chr1:29975857-29975458 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 37 |
| Conread position: | 341-782 |
| Cow position: | chr1:95765349-95764919 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 44 |
| Conread position: | 341-789 |
| Cow position: | chr1:70534194-70533757 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 44 |
| Conread position: | 341-797 |
| Cow position: | chr1:61736843-61737285 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 341-802 |
| Cow position: | chr1:74947377-74946926 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 44 |
| Conread position: | 342-800 |
| Cow position: | chr1:93110882-93110421 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 343-625 |
| Cow position: | chr1:20799610-20799894 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 54 |
| Conread position: | 343-708 |
| Cow position: | chr1:92642695-92642347 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 21 |
| Conread position: | 343-797 |
| Cow position: | chr1:31390842-31390403 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 316 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 320, 27 |
| Conread position: | 343-801 |
| Cow position: | chr1:31871162-31871621 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 42 |
| Conread position: | 345-628 |
| Cow position: | chr1:97620096-97619816 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 33 |
| Conread position: | 345-790 |
| Cow position: | chr1:46839338-46839790 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 40 |
| Conread position: | 345-804 |
| Cow position: | chr1:68827161-68826710 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 333, 33 |
| Conread position: | 346-576 |
| Cow position: | chr1:37646256-37646037 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 193, 36 |
| Conread position: | 347-712 |
| Cow position: | chr1:37707223-37706871 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 145, 44 |
| Conread position: | 350-558 |
| Cow position: | chr1:89395340-89395548 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 350-592 |
| Cow position: | chr1:81371923-81371687 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 161, 28 |
| Conread position: | 350-789 |
| Cow position: | chr1:49131373-49130950 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 35 |
| Conread position: | 351-734 |
| Cow position: | chr1:67994880-67995243 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 272 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 351-790 |
| Cow position: | chr1:7143099-7142679 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 34 |
| Conread position: | 351-790 |
| Cow position: | chr1:78791557-78791126 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 31 |
| Conread position: | 352-782 |
| Cow position: | chr1:25793689-25793265 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 353-800 |
| Cow position: | chr1:70538355-70538819 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 300 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 282, 40 |
| Conread position: | 355-587 |
| Cow position: | chr1:81277447-81277226 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 216, 23 |
| Conread position: | 355-788 |
| Cow position: | chr1:51256789-51257194 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 312 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 6, 28 |
| Conread position: | 355-790 |
| Cow position: | chr1:59650020-59650452 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 30 |
| Conread position: | 356-725 |
| Cow position: | chr1:6077649-6078009 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 219, 35 |
| Conread position: | 356-725 |
| Cow position: | chr1:71119266-71119637 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 145, 35 |
| Conread position: | 357-627 |
| Cow position: | chr1:51836327-51836586 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 259, 28 |
| Conread position: | 357-706 |
| Cow position: | chr1:56634852-56635198 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 309, 111 |
| Conread position: | 357-796 |
| Cow position: | chr1:56643833-56643416 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 359-666 |
| Cow position: | chr1:29648646-29648355 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 360-791 |
| Cow position: | chr1:62732334-62732748 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 28 |
| Conread position: | 360-815 |
| Cow position: | chr1:64189261-64189708 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 361-789 |
| Cow position: | chr1:8869904-8869495 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 361-800 |
| Cow position: | chr1:25281916-25281466 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 292 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 143, 30 |
| Conread position: | 362-796 |
| Cow position: | chr1:70236532-70236080 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 20 |
| Conread position: | 364-597 |
| Cow position: | chr1:10655240-10655470 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 215, 27 |
| Conread position: | 364-801 |
| Cow position: | chr1:85411342-85411774 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 24 |
| Conread position: | 365-792 |
| Cow position: | chr1:65664824-65665236 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 56 |
| Conread position: | 365-807 |
| Cow position: | chr1:22910137-22910550 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 370-662 |
| Cow position: | chr1:101812506-101812226 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 15 |
| Conread position: | 373-798 |
| Cow position: | chr1:92010085-92010506 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 15 |
| Conread position: | 373-815 |
| Cow position: | chr1:52052932-52052505 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 293, 12 |
| Conread position: | 375-706 |
| Cow position: | chr1:77383532-77383858 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 122, 150 |
| Conread position: | 377-793 |
| Cow position: | chr1:69415945-69415525 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 130 |
| Conread position: | 382-799 |
| Cow position: | chr1:96472207-96472625 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 9, 139 |
| Conread position: | 386-593 |
| Cow position: | chr1:64939161-64938958 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 10, 69 |
| Conread position: | 386-616 |
| Cow position: | chr1:5061803-5062030 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 14, 120 |
| Conread position: | 389-737 |
| Cow position: | chr1:84015657-84016000 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 138 |
| Conread position: | 391-791 |
| Cow position: | chr1:74956236-74955830 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 260, 61 |
| Conread position: | 394-661 |
| Cow position: | chr1:95654925-95654667 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 206, 103 |
| Conread position: | 394-662 |
| Cow position: | chr1:26179024-26178764 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 218, 103 |
| Conread position: | 395-780 |
| Cow position: | chr1:58825340-58825712 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 57 |
| Conread position: | 396-736 |
| Cow position: | chr1:12464871-12464535 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 191, 69 |
| Conread position: | 406-650 |
| Cow position: | chr1:765770-765529 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 410-760 |
| Cow position: | chr1:89443670-89443328 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 44 |
| Conread position: | 412-756 |
| Cow position: | chr1:69004201-69004539 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 114 |
| Conread position: | 414-789 |
| Cow position: | chr1:89548000-89548368 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 423-668 |
| Cow position: | chr1:84235511-84235282 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 424-725 |
| Cow position: | chr1:60532363-60532655 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 187, 80 |
| Conread position: | 425-791 |
| Cow position: | chr1:45638305-45638662 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 79 |
| Conread position: | 425-804 |
| Cow position: | chr1:5278595-5278225 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 79 |
| Conread position: | 426-789 |
| Cow position: | chr1:13195602-13195252 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 80 |
| Conread position: | 426-800 |
| Cow position: | chr1:20581771-20582133 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 38 |
| Conread position: | 427-793 |
| Cow position: | chr1:60281190-60281553 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 76 |
| Conread position: | 429-755 |
| Cow position: | chr1:8192904-8192589 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 234, 23 |
| Conread position: | 432-739 |
| Cow position: | chr1:50345371-50345677 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 239, 74 |
| Conread position: | 433-772 |
| Cow position: | chr1:2997773-2998115 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 11 |
| Conread position: | 434-714 |
| Cow position: | chr1:57782840-57783111 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 229, 18 |
| Conread position: | 434-806 |
| Cow position: | chr1:20544122-20544481 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 261 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 201, 71 |
| Conread position: | 435-799 |
| Cow position: | chr1:38525418-38525799 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 168, 81 |
| Conread position: | 438-760 |
| Cow position: | chr1:75347451-75347777 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 65 |
| Conread position: | 439-804 |
| Cow position: | chr1:90413211-90413569 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 67 |
| Conread position: | 451-725 |
| Cow position: | chr1:52449764-52449504 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 153, 55 |
| Conread position: | 456-756 |
| Cow position: | chr1:63314677-63314979 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 131, 50 |
| Conread position: | 456-801 |
| Cow position: | chr1:46205666-46206002 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 214, 48 |
| Conread position: | 457-665 |
| Cow position: | chr1:7609464-7609670 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 52 |
| Conread position: | 457-798 |
| Cow position: | chr1:96339602-96339924 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 458-661 |
| Cow position: | chr1:85596200-85595997 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 116 |
| Conread position: | 458-777 |
| Cow position: | chr1:24778134-24777821 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 198, 32 |
| Conread position: | 461-767 |
| Cow position: | chr1:38692517-38692814 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 172, 43 |
| Conread position: | 461-791 |
| Cow position: | chr1:39225071-39224737 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 116, 48 |
| Conread position: | 463-766 |
| Cow position: | chr1:50045655-50045959 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 191, 57 |
| Conread position: | 467-712 |
| Cow position: | chr1:29657687-29657924 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 185, 39 |
| Conread position: | 470-800 |
| Cow position: | chr1:51904463-51904150 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 195, 34 |
| Conread position: | 476-728 |
| Cow position: | chr1:96025339-96025592 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 479-756 |
| Cow position: | chr1:72731910-72732189 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 192, 27 |
| Conread position: | 479-790 |
| Cow position: | chr1:44746737-44747042 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 25 |
| Conread position: | 481-782 |
| Cow position: | chr1:26531705-26531408 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 182, 25 |
| Conread position: | 489-716 |
| Cow position: | chr1:28944398-28944620 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 163, 15 |
| Conread position: | 489-725 |
| Cow position: | chr1:73653765-73653525 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 491-789 |
| Cow position: | chr1:75998573-75998290 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 172, 15 |
| Conread position: | 492-781 |
| Cow position: | chr1:73900884-73901177 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 506-790 |
| Cow position: | chr1:4788432-4788716 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 113, 20 |
| Conread position: | 513-802 |
| Cow position: | chr1:76170114-76170398 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 158, 24 |
| Conread position: | 514-754 |
| Cow position: | chr1:48083629-48083874 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 517-800 |
| Cow position: | chr1:30066523-30066812 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 149, 88 |
| Conread position: | 517-800 |
| Cow position: | chr1:59132304-59132021 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 153, 9 |
| Conread position: | 527-655 |
| Cow position: | chr1:87148778-87148904 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 119, 16 |
| Conread position: | 528-798 |
| Cow position: | chr1:15902408-15902685 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 56, 68 |
| Conread position: | 528-798 |
| Cow position: | chr1:96928949-96929220 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 48, 80 |
| Conread position: | 541-804 |
| Cow position: | chr1:45479658-45479395 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 107, 77 |
| Conread position: | 545-791 |
| Cow position: | chr1:54216949-54217199 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 125, 52 |
| Conread position: | 546-782 |
| Cow position: | chr1:46646322-46646557 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 18, 108 |
| Conread position: | 548-788 |
| Cow position: | chr1:64218492-64218249 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 114, 40 |
| Conread position: | 555-738 |
| Cow position: | chr1:62714008-62713825 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 115, 28 |
| Conread position: | 564-781 |
| Cow position: | chr1:54125264-54125053 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 63 |
| Conread position: | 565-800 |
| Cow position: | chr1:36614134-36613900 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 575-790 |
| Cow position: | chr1:18414506-18414288 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 91, 178 |
| Conread position: | 577-803 |
| Cow position: | chr1:53920555-53920779 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 26 |
| Conread position: | 581-782 |
| Cow position: | chr1:97603665-97603465 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 86, 14 |
| Conread position: | 591-789 |
| Cow position: | chr1:75183770-75183570 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 30 |
| Conread position: | 606-798 |
| Cow position: | chr1:45310280-45310085 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 609-788 |
| Cow position: | chr1:6130738-6130560 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 612-800 |
| Cow position: | chr1:50261929-50261737 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 7 |
| Conread position: | 614-790 |
| Cow position: | chr1:80384764-80384581 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 625-804 |
| Cow position: | chr1:67974068-67973893 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 633-804 |
| Cow position: | chr1:29337933-29338113 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 643-791 |
| Cow position: | chr1:12227072-12226917 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 665-798 |
| Cow position: | chr1:80886563-80886695 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 674-800 |
| Cow position: | chr1:75224981-75225105 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 674-803 |
| Cow position: | chr1:63364695-63364824 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 675-800 |
| Cow position: | chr1:23674401-23674278 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 676-788 |
| Cow position: | chr1:3570243-3570131 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.