Cow genome map

Conread name: Pig4-TMW8022I05

Conread position: 18-543
Cow position: chr18:7950502-7951014 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 26

Conread position: 28-754
Cow position: chr18:33274691-33275397 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 34-800
Cow position: chr18:37332143-37331375 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 195
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 637, 560

Conread position: 35-737
Cow position: chr18:21938751-21939444 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 107

Conread position: 36-728
Cow position: chr18:17334989-17334339 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 7

Conread position: 37-614
Cow position: chr18:16172862-16172307 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 99

Conread position: 37-791
Cow position: chr18:55697619-55696883 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 29

Conread position: 40-710
Cow position: chr18:11368370-11367688 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 87

Conread position: 44-652
Cow position: chr18:39279574-39278996 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 50

Conread position: 44-660
Cow position: chr18:43430762-43431356 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 92

Conread position: 44-664
Cow position: chr18:44262032-44262640 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 99

Conread position: 44-725
Cow position: chr18:10655874-10656518 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 99

Conread position: 44-743
Cow position: chr18:1494706-1495400 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 92

Conread position: 45-613
Cow position: chr18:38157784-38157241 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 78

Conread position: 45-713
Cow position: chr18:51211583-51212250 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 85

Conread position: 45-767
Cow position: chr18:17324140-17324820 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 458, 12

Conread position: 45-815
Cow position: chr18:33299325-33300074 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 99

Conread position: 49-500
Cow position: chr18:23619043-23619487 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 312
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 176, 10

Conread position: 49-720
Cow position: chr18:21682565-21681899 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 93

Conread position: 64-521
Cow position: chr18:31003335-31002905 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 441, 72

Conread position: 69-549
Cow position: chr18:21721838-21721378 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 67

Conread position: 70-715
Cow position: chr18:22065924-22065276 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 66

Conread position: 89-800
Cow position: chr18:40203332-40202657 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 54

Conread position: 148-558
Cow position: chr18:19123682-19124087 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 158-788
Cow position: chr18:4039693-4040310 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 56

Conread position: 164-654
Cow position: chr18:35636817-35636346 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 50

Conread position: 164-790
Cow position: chr18:50993745-50993144 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 38

Conread position: 167-577
Cow position: chr18:4765768-4765351 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 108

Conread position: 167-654
Cow position: chr18:13498084-13497597 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 110

Conread position: 182-736
Cow position: chr18:22121332-22120795 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 25

Conread position: 209-797
Cow position: chr18:45961691-45961122 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 67

Conread position: 209-800
Cow position: chr18:16842503-16841898 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 72

Conread position: 234-793
Cow position: chr18:51486854-51486321 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 372
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 437, 37

Conread position: 245-549
Cow position: chr18:4624824-4624530 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 96, 30

Conread position: 245-804
Cow position: chr18:29796828-29796275 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 250-602
Cow position: chr18:5570770-5571112 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 25

Conread position: 262-500
Cow position: chr18:1185639-1185861 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 265-519
Cow position: chr18:2849636-2849385 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 76, 10

Conread position: 272-701
Cow position: chr18:20174499-20174074 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 285-790
Cow position: chr18:35797265-35797754 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 98

Conread position: 297-790
Cow position: chr18:49100714-49100223 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 330
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 7, 40

Conread position: 301-792
Cow position: chr18:51298140-51298625 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 92

Conread position: 325-542
Cow position: chr18:1733507-1733301 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 54

Conread position: 328-616
Cow position: chr18:51412062-51412333 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 13, 20

Conread position: 332-797
Cow position: chr18:39503993-39503550 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 53

Conread position: 335-712
Cow position: chr18:21175875-21176253 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 44

Conread position: 335-790
Cow position: chr18:50700360-50700828 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 47

Conread position: 335-791
Cow position: chr18:10101187-10101630 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 43

Conread position: 338-791
Cow position: chr18:26335117-26334661 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 10

Conread position: 339-789
Cow position: chr18:51587840-51587405 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 304
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 145, 37

Conread position: 340-753
Cow position: chr18:23424628-23425025 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 33

Conread position: 341-660
Cow position: chr18:36477901-36478209 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 341-732
Cow position: chr18:25970931-25970546 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 44

Conread position: 341-780
Cow position: chr18:42060777-42061209 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 112

Conread position: 341-790
Cow position: chr18:4578768-4578344 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 308
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 44

Conread position: 341-799
Cow position: chr18:51272039-51271592 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 318
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 86, 44

Conread position: 343-590
Cow position: chr18:23808170-23807933 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 343-669
Cow position: chr18:4515730-4516045 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 343-725
Cow position: chr18:22214189-22214567 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 257
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 263, 39

Conread position: 347-705
Cow position: chr18:50381964-50382308 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 236
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 44

Conread position: 348-706
Cow position: chr18:38794152-38793827 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 288, 31

Conread position: 349-713
Cow position: chr18:19387289-19387639 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 36

Conread position: 349-789
Cow position: chr18:9806119-9806562 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 36

Conread position: 350-577
Cow position: chr18:31562680-31562468 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 28, 0

Conread position: 352-712
Cow position: chr18:25282843-25282487 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 71, 39

Conread position: 353-620
Cow position: chr18:50566585-50566842 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 29, 0

Conread position: 357-712
Cow position: chr18:2592456-2592100 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 244, 34

Conread position: 360-621
Cow position: chr18:39185330-39185579 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 19, 0

Conread position: 360-791
Cow position: chr18:34325238-34324805 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 17

Conread position: 362-778
Cow position: chr18:16726368-16726780 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 23

Conread position: 363-735
Cow position: chr18:32773602-32773966 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 22

Conread position: 371-798
Cow position: chr18:24856119-24855698 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 294
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 23, 29

Conread position: 382-638
Cow position: chr18:35582363-35582113 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 87

Conread position: 384-798
Cow position: chr18:19363673-19364084 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 24

Conread position: 386-737
Cow position: chr18:23360372-23360718 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 92

Conread position: 386-766
Cow position: chr18:22411874-22411492 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 67

Conread position: 403-749
Cow position: chr18:41072764-41073089 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 271, 5

Conread position: 405-790
Cow position: chr18:44493708-44493342 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 262
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 45

Conread position: 412-791
Cow position: chr18:23715119-23714726 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 56

Conread position: 414-800
Cow position: chr18:6157694-6158062 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 270
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 164, 30

Conread position: 420-799
Cow position: chr18:15831800-15831450 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 243, 32

Conread position: 421-791
Cow position: chr18:35766967-35767313 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 73, 82

Conread position: 430-634
Cow position: chr18:306276-306083 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 437-725
Cow position: chr18:3780231-3780511 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 34

Conread position: 451-620
Cow position: chr18:35749172-35749012 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 454-789
Cow position: chr18:23487831-23488172 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 15, 52

Conread position: 461-759
Cow position: chr18:32517546-32517240 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 0

Conread position: 461-800
Cow position: chr18:46321171-46320829 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 65, 43

Conread position: 474-801
Cow position: chr18:5755809-5756134 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 30

Conread position: 478-800
Cow position: chr18:9154716-9155043 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 214
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 173, 25

Conread position: 479-798
Cow position: chr18:30586387-30586066 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 187, 29

Conread position: 490-725
Cow position: chr18:37745648-37745880 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 36

Conread position: 498-769
Cow position: chr18:21706330-21706061 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 29

Conread position: 509-759
Cow position: chr18:20423114-20422864 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 153, 17

Conread position: 516-801
Cow position: chr18:33843205-33842930 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 118, 10

Conread position: 518-800
Cow position: chr18:40893141-40893427 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 59

Conread position: 539-791
Cow position: chr18:11362140-11362394 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 127, 57

Conread position: 543-801
Cow position: chr18:16448448-16448693 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 548-721
Cow position: chr18:213642-213462 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 561-810
Cow position: chr18:1190810-1190557 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 20

Conread position: 574-800
Cow position: chr18:38126527-38126296 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 133

Conread position: 594-800
Cow position: chr18:26372861-26373074 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 606-778
Cow position: chr18:30566602-30566427 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 35

Conread position: 613-805
Cow position: chr18:48458634-48458828 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 154

Conread position: 665-783
Cow position: chr18:35607942-35608062 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 671-798
Cow position: chr18:28794862-28794987 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 0

Show alignments to all cow chromosomes.