Cow genome map

Conread name: Pig4-TMW8022I05

Conread position: 33-664
Cow position: chr2:21645014-21644407 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 10

Conread position: 34-736
Cow position: chr2:72527403-72528082 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 10

Conread position: 35-500
Cow position: chr2:80892865-80892418 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 14

Conread position: 35-502
Cow position: chr2:15963342-15962885 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 9

Conread position: 35-502
Cow position: chr2:70498434-70497961 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 8

Conread position: 37-731
Cow position: chr2:70752211-70752913 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 62

Conread position: 39-656
Cow position: chr2:64972488-64973109 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 72

Conread position: 39-791
Cow position: chr2:52170707-52171428 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 60

Conread position: 41-798
Cow position: chr2:7534349-7533577 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 95

Conread position: 43-800
Cow position: chr2:31456938-31457675 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 608, 92

Conread position: 44-569
Cow position: chr2:49449436-49448933 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 92

Conread position: 44-701
Cow position: chr2:4017405-4016759 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 35

Conread position: 44-728
Cow position: chr2:23848353-23847720 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 92

Conread position: 44-790
Cow position: chr2:24270672-24271410 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 92

Conread position: 45-556
Cow position: chr2:60955837-60956312 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 338
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 91, 0

Conread position: 45-591
Cow position: chr2:42599355-42599905 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 108

Conread position: 45-597
Cow position: chr2:41451679-41452213 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 98

Conread position: 45-632
Cow position: chr2:23015044-23014466 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 91

Conread position: 45-653
Cow position: chr2:29612014-29612584 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 91

Conread position: 45-669
Cow position: chr2:57508863-57509451 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 45-669
Cow position: chr2:62819267-62818657 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 91

Conread position: 45-725
Cow position: chr2:38376332-38377014 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 91

Conread position: 45-735
Cow position: chr2:469092-469758 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 76

Conread position: 45-737
Cow position: chr2:21210976-21211665 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 82

Conread position: 45-759
Cow position: chr2:62225629-62226314 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 60

Conread position: 45-789
Cow position: chr2:48749267-48748554 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 621, 91

Conread position: 49-788
Cow position: chr2:49481137-49480416 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 45

Conread position: 55-596
Cow position: chr2:52386473-52385936 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 5

Conread position: 55-779
Cow position: chr2:18062185-18061464 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 103

Conread position: 57-801
Cow position: chr2:27613549-27612850 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 79

Conread position: 64-782
Cow position: chr2:39815808-39815108 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 530, 72

Conread position: 79-800
Cow position: chr2:64197510-64196806 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 57

Conread position: 82-577
Cow position: chr2:85067653-85067159 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 59

Conread position: 83-802
Cow position: chr2:72758091-72758816 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 53

Conread position: 84-592
Cow position: chr2:1365404-1364911 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 59

Conread position: 87-799
Cow position: chr2:36867276-36866600 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 49

Conread position: 96-503
Cow position: chr2:70776069-70775672 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 78

Conread position: 106-725
Cow position: chr2:76822757-76822146 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 154-739
Cow position: chr2:78906487-78907045 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 52

Conread position: 159-527
Cow position: chr2:304801-304442 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 122

Conread position: 159-597
Cow position: chr2:46184716-46184286 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 60

Conread position: 159-650
Cow position: chr2:63865769-63865295 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 159-739
Cow position: chr2:85249909-85250460 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 117

Conread position: 160-742
Cow position: chr2:70580158-70579574 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 117

Conread position: 177-599
Cow position: chr2:48069822-48069419 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 30

Conread position: 177-689
Cow position: chr2:69676959-69676454 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 42

Conread position: 177-791
Cow position: chr2:41897013-41897622 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 103

Conread position: 179-800
Cow position: chr2:22159-21549 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 32

Conread position: 192-799
Cow position: chr2:31155289-31155893 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 42

Conread position: 198-782
Cow position: chr2:4070521-4071090 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 9

Conread position: 203-710
Cow position: chr2:45499594-45499103 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 17

Conread position: 210-790
Cow position: chr2:43773975-43773408 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 178

Conread position: 211-704
Cow position: chr2:69251074-69250576 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 64

Conread position: 211-800
Cow position: chr2:7721292-7720726 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 62

Conread position: 212-647
Cow position: chr2:29268669-29269095 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 32

Conread position: 212-661
Cow position: chr2:50445499-50445943 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 63

Conread position: 214-779
Cow position: chr2:10357062-10356512 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 61

Conread position: 214-800
Cow position: chr2:15674153-15674735 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 61

Conread position: 217-614
Cow position: chr2:2018909-2019281 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 259
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 219-502
Cow position: chr2:77970532-77970251 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 37, 57

Conread position: 219-668
Cow position: chr2:85339854-85339410 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 296
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 63

Conread position: 221-736
Cow position: chr2:42969711-42970232 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 344
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 55

Conread position: 227-728
Cow position: chr2:1918662-1918191 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 228-713
Cow position: chr2:82311567-82311101 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 47

Conread position: 234-637
Cow position: chr2:56102842-56102437 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 45

Conread position: 235-664
Cow position: chr2:65270066-65269646 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 40

Conread position: 238-799
Cow position: chr2:70663659-70664204 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 37

Conread position: 246-647
Cow position: chr2:60182684-60182280 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 96

Conread position: 247-801
Cow position: chr2:51638186-51638740 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 28

Conread position: 263-742
Cow position: chr2:30639846-30640325 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 12

Conread position: 272-791
Cow position: chr2:41313564-41314066 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 54

Conread position: 273-610
Cow position: chr2:18889728-18889391 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 222
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 148, 88

Conread position: 273-645
Cow position: chr2:71921893-71922254 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 255
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 90, 63

Conread position: 274-501
Cow position: chr2:25144842-25145069 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 113

Conread position: 281-661
Cow position: chr2:38965294-38965661 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 62

Conread position: 283-599
Cow position: chr2:37921103-37920800 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 59, 100

Conread position: 284-798
Cow position: chr2:32114742-32115266 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 30

Conread position: 285-800
Cow position: chr2:17426827-17427358 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 59

Conread position: 292-647
Cow position: chr2:1211084-1210736 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 49, 100

Conread position: 297-641
Cow position: chr2:77214418-77214754 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 48

Conread position: 297-668
Cow position: chr2:43718598-43718950 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 101

Conread position: 302-599
Cow position: chr2:46033018-46033314 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 116

Conread position: 305-662
Cow position: chr2:9062967-9063315 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 87

Conread position: 315-799
Cow position: chr2:42309846-42309366 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 39

Conread position: 316-549
Cow position: chr2:63274252-63274007 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 320-801
Cow position: chr2:26501228-26500732 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 72

Conread position: 321-575
Cow position: chr2:45311414-45311165 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 71

Conread position: 325-782
Cow position: chr2:14099366-14099818 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 10

Conread position: 326-668
Cow position: chr2:4273552-4273218 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 65

Conread position: 327-588
Cow position: chr2:29546280-29546025 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 60

Conread position: 328-801
Cow position: chr2:38206048-38205573 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 318
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 19

Conread position: 332-758
Cow position: chr2:13582308-13582725 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 298
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 47

Conread position: 335-729
Cow position: chr2:50606277-50606654 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 50

Conread position: 335-801
Cow position: chr2:51027669-51028142 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 31

Conread position: 337-725
Cow position: chr2:18636623-18637001 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 48

Conread position: 337-790
Cow position: chr2:42925033-42925468 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 309
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 16, 49

Conread position: 339-661
Cow position: chr2:46244294-46243977 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 340-790
Cow position: chr2:40428070-40427620 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 44

Conread position: 340-798
Cow position: chr2:425554-425998 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 341-661
Cow position: chr2:13354409-13354717 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 271, 50

Conread position: 341-712
Cow position: chr2:41185205-41185557 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 24

Conread position: 341-725
Cow position: chr2:40492103-40492470 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 341-731
Cow position: chr2:52777014-52777390 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 47

Conread position: 341-771
Cow position: chr2:14749329-14749748 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 44

Conread position: 341-780
Cow position: chr2:22859903-22859465 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 31

Conread position: 341-790
Cow position: chr2:41248302-41248761 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 313
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 253, 50

Conread position: 343-661
Cow position: chr2:51594501-51594806 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 343-781
Cow position: chr2:29382937-29382510 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 42

Conread position: 343-800
Cow position: chr2:73069453-73069901 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 42

Conread position: 344-711
Cow position: chr2:16428663-16428302 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 251
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 243, 34

Conread position: 345-782
Cow position: chr2:33659964-33659532 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 345-791
Cow position: chr2:46741214-46741662 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 40

Conread position: 347-660
Cow position: chr2:72598544-72598844 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 207
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 204, 38

Conread position: 347-663
Cow position: chr2:6356647-6356337 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 206
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 169, 46

Conread position: 347-781
Cow position: chr2:4384152-4383729 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 31

Conread position: 348-661
Cow position: chr2:46175535-46175219 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 225
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 37

Conread position: 349-732
Cow position: chr2:43123060-43123460 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 277
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 14, 46

Conread position: 349-736
Cow position: chr2:18621148-18621541 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 268
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 30

Conread position: 349-798
Cow position: chr2:21182901-21183330 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 95

Conread position: 349-800
Cow position: chr2:51799579-51799132 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 305
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 323, 36

Conread position: 350-790
Cow position: chr2:32453765-32453354 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 35

Conread position: 350-794
Cow position: chr2:14556008-14555573 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 30

Conread position: 351-739
Cow position: chr2:40313114-40313491 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 31

Conread position: 351-790
Cow position: chr2:13604199-13604647 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 125

Conread position: 352-683
Cow position: chr2:28118246-28118563 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 217
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 231, 39

Conread position: 352-725
Cow position: chr2:36435946-36436318 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 260, 39

Conread position: 352-728
Cow position: chr2:68843204-68842825 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 33

Conread position: 352-744
Cow position: chr2:46909698-46909305 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 260
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 148

Conread position: 352-800
Cow position: chr2:75600457-75600916 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 285
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 26

Conread position: 353-729
Cow position: chr2:70790995-70790637 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 312, 29

Conread position: 353-791
Cow position: chr2:47990186-47990616 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 302
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 313, 25

Conread position: 355-575
Cow position: chr2:36630717-36630931 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 355-712
Cow position: chr2:21383109-21382752 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 307, 36

Conread position: 355-808
Cow position: chr2:39584199-39584641 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 305
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 284, 23

Conread position: 359-627
Cow position: chr2:46359297-46359029 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 209, 23

Conread position: 361-725
Cow position: chr2:32498873-32498519 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 362-644
Cow position: chr2:46330811-46331087 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 364-743
Cow position: chr2:74249470-74249096 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 258
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 18

Conread position: 365-725
Cow position: chr2:66780099-66779751 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 5, 21

Conread position: 366-790
Cow position: chr2:50400178-50400587 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 19

Conread position: 369-725
Cow position: chr2:70601759-70602112 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 16

Conread position: 370-772
Cow position: chr2:793410-793806 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 15

Conread position: 373-797
Cow position: chr2:26042473-26042055 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 12

Conread position: 374-615
Cow position: chr2:64226198-64226434 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 212, 132

Conread position: 376-777
Cow position: chr2:41461129-41461531 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 16, 63

Conread position: 379-783
Cow position: chr2:44229921-44229516 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 274
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 13, 80

Conread position: 390-608
Cow position: chr2:19154089-19154297 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 136, 54

Conread position: 391-800
Cow position: chr2:39786807-39787207 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 282
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 253, 14

Conread position: 394-782
Cow position: chr2:1651188-1651566 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 109

Conread position: 394-798
Cow position: chr2:81349100-81348692 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 278
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 182, 114

Conread position: 395-714
Cow position: chr2:24720083-24720389 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 191, 57

Conread position: 395-728
Cow position: chr2:29288816-29289138 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 270, 131

Conread position: 396-664
Cow position: chr2:42936426-42936165 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 176
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 159, 46

Conread position: 403-697
Cow position: chr2:2382769-2382473 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 101

Conread position: 405-801
Cow position: chr2:46120841-46120438 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 269
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 97

Conread position: 410-683
Cow position: chr2:9324794-9325062 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 47

Conread position: 413-661
Cow position: chr2:80595509-80595273 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 415-734
Cow position: chr2:54306479-54306781 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 250, 49

Conread position: 415-794
Cow position: chr2:6443833-6444212 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 24

Conread position: 420-725
Cow position: chr2:57293467-57293168 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 155, 77

Conread position: 423-577
Cow position: chr2:63488796-63488949 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 83

Conread position: 424-575
Cow position: chr2:32361585-32361732 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 424-669
Cow position: chr2:61820975-61820741 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 426-589
Cow position: chr2:39533911-39534072 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 132, 80

Conread position: 427-739
Cow position: chr2:39471950-39472251 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 179, 25

Conread position: 443-782
Cow position: chr2:58685208-58685551 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 61

Conread position: 446-713
Cow position: chr2:2740298-2740561 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 225, 57

Conread position: 447-768
Cow position: chr2:45726024-45726329 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 216, 17

Conread position: 451-800
Cow position: chr2:56269784-56269430 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 37, 79

Conread position: 457-705
Cow position: chr2:61950367-61950605 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 208, 47

Conread position: 470-782
Cow position: chr2:82054986-82054673 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 36

Conread position: 470-791
Cow position: chr2:67485100-67485422 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 196, 34

Conread position: 473-782
Cow position: chr2:77033538-77033851 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 210
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 34

Conread position: 473-815
Cow position: chr2:59380624-59380296 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 197, 33

Conread position: 474-612
Cow position: chr2:63657948-63658081 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 479-737
Cow position: chr2:70224231-70223980 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 138, 24

Conread position: 479-794
Cow position: chr2:62309562-62309256 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 173, 25

Conread position: 481-708
Cow position: chr2:68655171-68655403 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 117

Conread position: 490-798
Cow position: chr2:7498456-7498760 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 14

Conread position: 494-797
Cow position: chr2:83745152-83744872 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 172, 21

Conread position: 500-790
Cow position: chr2:20250587-20250884 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 192

Conread position: 517-714
Cow position: chr2:7947244-7947041 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 80

Conread position: 517-721
Cow position: chr2:39672853-39672639 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 79

Conread position: 527-664
Cow position: chr2:6935369-6935233 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 527-803
Cow position: chr2:31113758-31114023 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 143, 68

Conread position: 528-782
Cow position: chr2:24106304-24106560 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 138, 219

Conread position: 528-800
Cow position: chr2:39832302-39832569 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 143, 60

Conread position: 528-801
Cow position: chr2:73999637-73999910 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 138, 33

Conread position: 533-800
Cow position: chr2:15162658-15162925 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 137, 171

Conread position: 541-697
Cow position: chr2:73386924-73386762 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 125, 157

Conread position: 541-800
Cow position: chr2:33596745-33596464 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 73, 54

Conread position: 552-781
Cow position: chr2:2937503-2937726 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 38

Conread position: 564-798
Cow position: chr2:13465981-13466211 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 102, 194

Conread position: 581-753
Cow position: chr2:77982181-77982007 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 27

Conread position: 583-815
Cow position: chr2:25084646-25084887 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 23, 187

Conread position: 584-762
Cow position: chr2:70464401-70464581 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 88, 35

Conread position: 592-789
Cow position: chr2:73027415-73027618 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 79, 35

Conread position: 594-799
Cow position: chr2:62384710-62384496 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 597-791
Cow position: chr2:8601702-8601508 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 90

Conread position: 600-815
Cow position: chr2:42774262-42774476 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 47, 59

Conread position: 608-792
Cow position: chr2:61442589-61442775 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 63, 11

Conread position: 676-804
Cow position: chr2:10461429-10461557 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 55

Conread position: 677-799
Cow position: chr2:53969931-53969809 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.