Cow genome map

Conread name: Pig4-TMW8022I05

Conread position: 34-570
Cow position: chr23:7392828-7392337 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 10

Conread position: 35-502
Cow position: chr23:39389701-39390158 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 9

Conread position: 35-634
Cow position: chr23:10852498-10853071 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 574, 8

Conread position: 35-669
Cow position: chr23:11128666-11129284 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 9

Conread position: 44-717
Cow position: chr23:13598805-13599447 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 92

Conread position: 44-725
Cow position: chr23:9733847-9734523 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 92

Conread position: 44-794
Cow position: chr23:22804180-22804924 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 624, 92

Conread position: 45-784
Cow position: chr23:19002622-19001895 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 91

Conread position: 45-795
Cow position: chr23:29271553-29272294 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 91

Conread position: 46-798
Cow position: chr23:20586268-20585514 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 93

Conread position: 49-734
Cow position: chr23:9712151-9711472 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 92

Conread position: 55-603
Cow position: chr23:37191122-37190597 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 81

Conread position: 56-712
Cow position: chr23:6593253-6592605 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 80

Conread position: 82-594
Cow position: chr23:406669-406194 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 341
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 259, 48

Conread position: 90-558
Cow position: chr23:11564860-11564401 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 51

Conread position: 159-558
Cow position: chr23:3727839-3727453 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 159-587
Cow position: chr23:3745166-3745580 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 110

Conread position: 159-790
Cow position: chr23:14126113-14126742 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 91

Conread position: 177-618
Cow position: chr23:39741158-39740738 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 302
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 164, 30

Conread position: 177-647
Cow position: chr23:2021877-2021433 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 313
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 164, 30

Conread position: 181-647
Cow position: chr23:16172240-16172691 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 33

Conread position: 198-744
Cow position: chr23:11434675-11434127 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 77

Conread position: 198-790
Cow position: chr23:19636673-19636083 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 79

Conread position: 202-733
Cow position: chr23:40526375-40525861 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 57

Conread position: 218-645
Cow position: chr23:9595217-9594806 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 57

Conread position: 229-725
Cow position: chr23:16700396-16699927 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 334
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 305, 46

Conread position: 235-815
Cow position: chr23:16058228-16058787 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 40

Conread position: 236-742
Cow position: chr23:14164773-14164262 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 38

Conread position: 237-725
Cow position: chr23:38455553-38455063 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 25

Conread position: 241-799
Cow position: chr23:5389339-5389887 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 38

Conread position: 247-737
Cow position: chr23:11404619-11404145 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 25

Conread position: 261-782
Cow position: chr23:8930456-8929969 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 14

Conread position: 290-722
Cow position: chr23:20752696-20753118 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 89

Conread position: 297-498
Cow position: chr23:1610532-1610741 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 44, 105

Conread position: 300-800
Cow position: chr23:22660873-22660400 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 35

Conread position: 316-803
Cow position: chr23:20171288-20171773 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 54

Conread position: 321-739
Cow position: chr23:35363057-35362650 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 21

Conread position: 327-760
Cow position: chr23:17092768-17092348 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 335-705
Cow position: chr23:20781551-20781903 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 52

Conread position: 340-789
Cow position: chr23:37224332-37223895 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 340-804
Cow position: chr23:16237526-16237059 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 341-530
Cow position: chr23:4338871-4338688 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 341-790
Cow position: chr23:9652732-9652311 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 296
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 326, 44

Conread position: 341-802
Cow position: chr23:28700737-28701177 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 44

Conread position: 347-737
Cow position: chr23:22588529-22588152 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 38

Conread position: 348-595
Cow position: chr23:1991685-1991447 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 235, 43

Conread position: 348-654
Cow position: chr23:20057125-20056828 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 350-542
Cow position: chr23:6244843-6244653 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 173, 41

Conread position: 351-499
Cow position: chr23:39302460-39302606 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 352-605
Cow position: chr23:4810496-4810742 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 352-654
Cow position: chr23:19979202-19978918 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 352-655
Cow position: chr23:7221268-7220976 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 352-709
Cow position: chr23:41590163-41589824 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 27

Conread position: 353-792
Cow position: chr23:17000448-17000878 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 25

Conread position: 355-789
Cow position: chr23:21866506-21866919 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 30

Conread position: 358-628
Cow position: chr23:12369628-12369372 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 359-791
Cow position: chr23:13359573-13360006 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 19

Conread position: 362-661
Cow position: chr23:2055458-2055747 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 365-668
Cow position: chr23:24704033-24704334 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 15, 82

Conread position: 366-617
Cow position: chr23:25407694-25407448 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 137, 0

Conread position: 366-800
Cow position: chr23:40891122-40891552 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 290
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 301, 12

Conread position: 371-599
Cow position: chr23:11080843-11081058 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 69

Conread position: 373-749
Cow position: chr23:30210577-30210210 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 260
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 97, 12

Conread position: 374-798
Cow position: chr23:5603506-5603093 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 296
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 68

Conread position: 378-800
Cow position: chr23:21659706-21660144 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 133

Conread position: 384-743
Cow position: chr23:30307684-30308040 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 26

Conread position: 391-634
Cow position: chr23:32662358-32662596 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 391-799
Cow position: chr23:20996255-20996644 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 264
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 273, 53

Conread position: 395-575
Cow position: chr23:4523192-4523019 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 395-741
Cow position: chr23:40648941-40648601 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 206, 102

Conread position: 395-782
Cow position: chr23:28895181-28894784 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 96

Conread position: 398-712
Cow position: chr23:1742147-1742456 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 209
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 25

Conread position: 404-792
Cow position: chr23:35177113-35177502 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 42

Conread position: 407-800
Cow position: chr23:30773881-30773512 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 69

Conread position: 422-808
Cow position: chr23:16793411-16793776 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 217, 45

Conread position: 426-739
Cow position: chr23:27290964-27290663 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 207
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 102

Conread position: 430-800
Cow position: chr23:40651640-40651282 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 258
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 240, 24

Conread position: 436-790
Cow position: chr23:26861284-26861611 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 443-713
Cow position: chr23:1767661-1767931 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 223, 47

Conread position: 448-763
Cow position: chr23:16072484-16072192 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 449-802
Cow position: chr23:19774611-19774958 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 221, 59

Conread position: 455-669
Cow position: chr23:6031724-6031927 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 471-810
Cow position: chr23:26050895-26051237 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 195, 38

Conread position: 479-791
Cow position: chr23:18326671-18326984 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 48

Conread position: 498-624
Cow position: chr23:35374076-35373946 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 506-798
Cow position: chr23:4955932-4956206 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 143, 20

Conread position: 510-736
Cow position: chr23:14543329-14543098 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 157

Conread position: 517-733
Cow position: chr23:29393337-29393554 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 122, 78

Conread position: 523-791
Cow position: chr23:23192244-23191984 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 8, 91

Conread position: 530-800
Cow position: chr23:21276108-21275830 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 105, 73

Conread position: 531-798
Cow position: chr23:35498106-35497846 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 135, 22

Conread position: 535-804
Cow position: chr23:35155292-35155568 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 30

Conread position: 538-752
Cow position: chr23:1677319-1677536 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 103, 63

Conread position: 538-804
Cow position: chr23:11751208-11750939 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 97

Conread position: 540-805
Cow position: chr23:7611193-7611453 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 106, 41

Conread position: 545-791
Cow position: chr23:26217492-26217735 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 91, 123

Conread position: 565-791
Cow position: chr23:36082530-36082765 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 57, 16

Conread position: 581-789
Cow position: chr23:1717586-1717371 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 595-800
Cow position: chr23:9812250-9812049 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 26

Conread position: 671-800
Cow position: chr23:18967828-18967699 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 679-790
Cow position: chr23:19981616-19981505 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.