Cow genome map

Conread name: Pig4-TMW8022I05

Conread position: 37-570
Cow position: chr24:39500871-39500350 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 108

Conread position: 38-708
Cow position: chr24:17412162-17412797 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 101

Conread position: 44-646
Cow position: chr24:40129545-40130130 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 92

Conread position: 44-725
Cow position: chr24:31323695-31324372 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 181

Conread position: 44-734
Cow position: chr24:12264271-12263617 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 27

Conread position: 45-634
Cow position: chr24:41333464-41332885 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 96

Conread position: 45-645
Cow position: chr24:6341588-6342179 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 96

Conread position: 45-712
Cow position: chr24:29170416-29171037 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 621, 20

Conread position: 45-743
Cow position: chr24:25677453-25678130 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 91

Conread position: 45-786
Cow position: chr24:39681291-39681998 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 494, 36

Conread position: 45-790
Cow position: chr24:32759363-32758610 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 91

Conread position: 49-800
Cow position: chr24:35568607-35569334 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 92

Conread position: 50-790
Cow position: chr24:32158838-32158123 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 53

Conread position: 51-647
Cow position: chr24:11886596-11887162 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 85

Conread position: 57-647
Cow position: chr24:5849973-5849390 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 79

Conread position: 67-777
Cow position: chr24:28336096-28335424 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 60

Conread position: 71-619
Cow position: chr24:20024064-20024593 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 65

Conread position: 159-595
Cow position: chr24:39441024-39440602 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 52

Conread position: 159-781
Cow position: chr24:36800920-36801519 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 60

Conread position: 164-614
Cow position: chr24:11940902-11941334 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 43

Conread position: 168-799
Cow position: chr24:30860167-30860795 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 13

Conread position: 177-642
Cow position: chr24:28353710-28354152 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 34

Conread position: 211-645
Cow position: chr24:20862385-20861960 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 67

Conread position: 212-739
Cow position: chr24:1272290-1271788 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 63

Conread position: 219-576
Cow position: chr24:19658132-19658491 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 58

Conread position: 220-498
Cow position: chr24:37975482-37975211 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 56

Conread position: 220-619
Cow position: chr24:37205285-37204901 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 39

Conread position: 249-659
Cow position: chr24:4241080-4240681 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 276
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 91, 26

Conread position: 256-652
Cow position: chr24:37546686-37547077 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 255
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 85, 19

Conread position: 261-616
Cow position: chr24:43733600-43733945 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 14

Conread position: 280-576
Cow position: chr24:7301105-7301395 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 61, 32

Conread position: 292-804
Cow position: chr24:40091909-40091421 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 29

Conread position: 306-800
Cow position: chr24:27054081-27054569 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 77

Conread position: 315-669
Cow position: chr24:27341342-27340996 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 77

Conread position: 322-603
Cow position: chr24:27274911-27275191 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 187
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 63

Conread position: 330-669
Cow position: chr24:42345311-42344973 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 224
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 29

Conread position: 335-801
Cow position: chr24:7079494-7079946 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 35

Conread position: 336-614
Cow position: chr24:40284670-40284403 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 5, 43

Conread position: 336-756
Cow position: chr24:35529626-35530020 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 50

Conread position: 338-782
Cow position: chr24:27633119-27633543 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 47

Conread position: 340-651
Cow position: chr24:35795033-35794729 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 52

Conread position: 340-791
Cow position: chr24:34369298-34368854 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 42

Conread position: 341-630
Cow position: chr24:39258873-39259146 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 44

Conread position: 341-669
Cow position: chr24:23685352-23685042 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 47

Conread position: 341-776
Cow position: chr24:1438558-1438131 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 297
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 266, 41

Conread position: 341-800
Cow position: chr24:6508054-6507607 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 37

Conread position: 342-810
Cow position: chr24:27608384-27607919 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 311
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 26

Conread position: 343-530
Cow position: chr24:13783787-13783599 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 157, 42

Conread position: 344-790
Cow position: chr24:28279356-28279775 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 42

Conread position: 346-654
Cow position: chr24:35073806-35074102 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 348-709
Cow position: chr24:18243749-18243395 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 166, 37

Conread position: 348-798
Cow position: chr24:14746353-14746804 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 38

Conread position: 349-789
Cow position: chr24:24311218-24311653 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 35

Conread position: 349-815
Cow position: chr24:39350491-39350043 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 33

Conread position: 350-668
Cow position: chr24:13297987-13297691 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 257, 29

Conread position: 355-790
Cow position: chr24:31378477-31378900 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 27

Conread position: 356-717
Cow position: chr24:19769222-19769570 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 310, 35

Conread position: 362-709
Cow position: chr24:32894143-32894463 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 181, 16

Conread position: 369-800
Cow position: chr24:2970870-2970445 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 290
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 16

Conread position: 382-782
Cow position: chr24:6061651-6061238 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 71

Conread position: 394-782
Cow position: chr24:14617416-14617801 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 50

Conread position: 398-668
Cow position: chr24:18343812-18344086 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 167, 61

Conread position: 403-780
Cow position: chr24:23824648-23824280 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 266
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 236, 72

Conread position: 412-802
Cow position: chr24:2143516-2143913 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 197

Conread position: 415-729
Cow position: chr24:32086133-32085839 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 255, 12

Conread position: 422-815
Cow position: chr24:18787131-18786750 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 20

Conread position: 426-798
Cow position: chr24:40673645-40673278 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 238
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 150, 77

Conread position: 429-725
Cow position: chr24:22079251-22079548 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 197
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 237, 87

Conread position: 429-756
Cow position: chr24:7401424-7401119 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 451-588
Cow position: chr24:29691482-29691344 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 77

Conread position: 453-759
Cow position: chr24:35827556-35827858 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 215, 50

Conread position: 461-604
Cow position: chr24:40855014-40855154 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 462-759
Cow position: chr24:19611834-19612128 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 204, 13

Conread position: 467-797
Cow position: chr24:31258509-31258181 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 59

Conread position: 479-760
Cow position: chr24:11201806-11201525 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 23, 48

Conread position: 479-782
Cow position: chr24:26455680-26455985 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 27

Conread position: 483-800
Cow position: chr24:40809514-40809205 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 156, 21

Conread position: 501-729
Cow position: chr24:41963233-41963008 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 166, 32

Conread position: 509-788
Cow position: chr24:16055630-16055361 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 162, 18

Conread position: 520-798
Cow position: chr24:15617595-15617315 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 46

Conread position: 521-697
Cow position: chr24:18393645-18393464 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 147, 13

Conread position: 528-790
Cow position: chr24:17981076-17981337 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 67

Conread position: 539-733
Cow position: chr24:36730450-36730635 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 55

Conread position: 552-800
Cow position: chr24:19754484-19754740 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 114, 84

Conread position: 553-803
Cow position: chr24:25164944-25165200 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 113, 43

Conread position: 590-790
Cow position: chr24:6427652-6427855 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 16

Conread position: 621-798
Cow position: chr24:16481326-16481154 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 73

Conread position: 622-799
Cow position: chr24:36497754-36497575 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 15

Conread position: 627-801
Cow position: chr24:41458104-41458276 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 648-791
Cow position: chr24:41332580-41332430 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.