Cow genome map
| Conread name: | Pig4-TMW8022I05 |
| Conread position: | 35-501 |
| Cow position: | chr25:26282469-26282912 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 35-502 |
| Cow position: | chr25:39386390-39385941 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 9 |
| Conread position: | 35-647 |
| Cow position: | chr25:25510334-25510920 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 9 |
| Conread position: | 35-799 |
| Cow position: | chr25:20075937-20076681 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 9 |
| Conread position: | 44-760 |
| Cow position: | chr25:10012607-10011915 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 97 |
| Conread position: | 45-502 |
| Cow position: | chr25:34659650-34659215 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 78 |
| Conread position: | 45-596 |
| Cow position: | chr25:13332867-13333401 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 98 |
| Conread position: | 45-669 |
| Cow position: | chr25:20495984-20496577 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 20 |
| Conread position: | 45-800 |
| Cow position: | chr25:23410106-23410843 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 91 |
| Conread position: | 45-800 |
| Cow position: | chr25:24137007-24136261 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 22 |
| Conread position: | 49-786 |
| Cow position: | chr25:27504721-27504032 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 431, 16 |
| Conread position: | 55-592 |
| Cow position: | chr25:41385644-41385129 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 337 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 282, 5 |
| Conread position: | 67-749 |
| Cow position: | chr25:15368158-15368827 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 62 |
| Conread position: | 73-790 |
| Cow position: | chr25:11437326-11436631 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 63 |
| Conread position: | 88-647 |
| Cow position: | chr25:14791249-14791781 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 488, 55 |
| Conread position: | 110-647 |
| Cow position: | chr25:18294802-18294290 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 26 |
| Conread position: | 159-638 |
| Cow position: | chr25:12824473-12824002 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 327 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 180, 33 |
| Conread position: | 159-804 |
| Cow position: | chr25:10748953-10748309 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 159-805 |
| Cow position: | chr25:26654463-26655097 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 52 |
| Conread position: | 160-790 |
| Cow position: | chr25:8576248-8576867 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 117 |
| Conread position: | 177-752 |
| Cow position: | chr25:22910298-22909724 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 226 |
| Conread position: | 177-753 |
| Cow position: | chr25:16866810-16867380 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 181-638 |
| Cow position: | chr25:5514587-5515029 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 26 |
| Conread position: | 183-743 |
| Cow position: | chr25:20007695-20008262 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 395 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 129, 24 |
| Conread position: | 209-707 |
| Cow position: | chr25:12235154-12234684 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 50 |
| Conread position: | 217-712 |
| Cow position: | chr25:26087123-26087619 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 58 |
| Conread position: | 220-527 |
| Cow position: | chr25:8628596-8628312 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 228-770 |
| Cow position: | chr25:16064518-16065055 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 233-790 |
| Cow position: | chr25:18000904-18000357 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 42 |
| Conread position: | 243-801 |
| Cow position: | chr25:40957353-40956802 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 34 |
| Conread position: | 251-725 |
| Cow position: | chr25:5847154-5846698 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 322 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 213, 24 |
| Conread position: | 267-794 |
| Cow position: | chr25:20625273-20624759 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 100 |
| Conread position: | 314-664 |
| Cow position: | chr25:6474397-6474046 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 26, 67 |
| Conread position: | 336-798 |
| Cow position: | chr25:36081600-36082069 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 321 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 5, 21 |
| Conread position: | 339-800 |
| Cow position: | chr25:14512845-14513309 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 316 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 225, 39 |
| Conread position: | 341-668 |
| Cow position: | chr25:38135478-38135795 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 341-714 |
| Cow position: | chr25:34668976-34669341 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 267 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 190, 13 |
| Conread position: | 341-780 |
| Cow position: | chr25:8512360-8511928 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 35 |
| Conread position: | 341-789 |
| Cow position: | chr25:24406009-24405560 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 341-800 |
| Cow position: | chr25:11131316-11131764 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 345-781 |
| Cow position: | chr25:33691289-33691715 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 40 |
| Conread position: | 345-804 |
| Cow position: | chr25:34970214-34970641 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 323 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 349-664 |
| Cow position: | chr25:17566326-17566628 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 265, 45 |
| Conread position: | 351-549 |
| Cow position: | chr25:8918537-8918342 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 82, 40 |
| Conread position: | 351-791 |
| Cow position: | chr25:5407491-5407908 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 289 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 263, 29 |
| Conread position: | 357-665 |
| Cow position: | chr25:8560616-8560911 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 251, 28 |
| Conread position: | 357-802 |
| Cow position: | chr25:14467335-14466918 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 19 |
| Conread position: | 360-798 |
| Cow position: | chr25:22575768-22575347 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 364-561 |
| Cow position: | chr25:24008423-24008233 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 385-789 |
| Cow position: | chr25:29312569-29312164 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 14 |
| Conread position: | 389-714 |
| Cow position: | chr25:17365480-17365169 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 217, 41 |
| Conread position: | 389-734 |
| Cow position: | chr25:16007566-16007901 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 277, 115 |
| Conread position: | 417-730 |
| Cow position: | chr25:5972270-5972571 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 89 |
| Conread position: | 431-790 |
| Cow position: | chr25:26457865-26457503 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 432-729 |
| Cow position: | chr25:32606506-32606212 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 165, 72 |
| Conread position: | 435-662 |
| Cow position: | chr25:16555581-16555805 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 174, 92 |
| Conread position: | 439-729 |
| Cow position: | chr25:33411081-33411371 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 90, 68 |
| Conread position: | 445-799 |
| Cow position: | chr25:27535081-27534736 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 226, 56 |
| Conread position: | 470-789 |
| Cow position: | chr25:36501384-36501067 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 172, 56 |
| Conread position: | 479-749 |
| Cow position: | chr25:16691526-16691790 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 104, 24 |
| Conread position: | 481-760 |
| Cow position: | chr25:33112103-33111836 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 186, 23 |
| Conread position: | 483-738 |
| Cow position: | chr25:22542938-22542691 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 486-800 |
| Cow position: | chr25:12932500-12932809 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 186, 20 |
| Conread position: | 490-711 |
| Cow position: | chr25:16560303-16560078 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 180, 36 |
| Conread position: | 502-791 |
| Cow position: | chr25:26240423-26240714 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 164, 19 |
| Conread position: | 506-800 |
| Cow position: | chr25:14075191-14075487 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 168, 20 |
| Conread position: | 509-700 |
| Cow position: | chr25:9519212-9519404 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 157, 17 |
| Conread position: | 521-783 |
| Cow position: | chr25:8080624-8080892 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 120, 233 |
| Conread position: | 529-797 |
| Cow position: | chr25:33205171-33204904 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 59, 54 |
| Conread position: | 529-799 |
| Cow position: | chr25:34379199-34378913 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 138, 206 |
| Conread position: | 530-779 |
| Cow position: | chr25:13562346-13562595 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 132, 64 |
| Conread position: | 538-786 |
| Cow position: | chr25:20811453-20811204 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 133, 57 |
| Conread position: | 545-782 |
| Cow position: | chr25:13560287-13560048 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 94, 52 |
| Conread position: | 553-713 |
| Cow position: | chr25:13727453-13727290 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 581-815 |
| Cow position: | chr25:30021033-30021276 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 586-799 |
| Cow position: | chr25:6177997-6178217 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 73 |
| Conread position: | 588-803 |
| Cow position: | chr25:19524463-19524257 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 606-778 |
| Cow position: | chr25:41094152-41093975 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 91 |
| Conread position: | 618-780 |
| Cow position: | chr25:13799946-13800115 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 665-798 |
| Cow position: | chr25:10204621-10204486 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.