Cow genome map

Conread name: Pig4-TMW8022I05

Conread position: 35-502
Cow position: chr28:10473654-10474106 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 35-502
Cow position: chr28:30532295-30531845 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 9

Conread position: 35-591
Cow position: chr28:7685228-7684706 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 8

Conread position: 35-630
Cow position: chr28:22171281-22170695 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 9

Conread position: 35-725
Cow position: chr28:21354671-21355348 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 9

Conread position: 37-549
Cow position: chr28:11356487-11355986 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 44

Conread position: 39-660
Cow position: chr28:11752698-11752098 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 98

Conread position: 39-792
Cow position: chr28:3914165-3914906 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 35

Conread position: 43-650
Cow position: chr28:29823894-29824476 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 93

Conread position: 44-578
Cow position: chr28:29806734-29806219 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 53

Conread position: 44-614
Cow position: chr28:26419291-26418745 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 44-811
Cow position: chr28:25826404-25825663 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 89

Conread position: 45-498
Cow position: chr28:12998335-12998766 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 33

Conread position: 45-709
Cow position: chr28:2815043-2814408 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 91

Conread position: 45-712
Cow position: chr28:21844413-21845062 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 91

Conread position: 45-782
Cow position: chr28:18933932-18934627 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 97

Conread position: 49-709
Cow position: chr28:13693185-13693850 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 104

Conread position: 49-758
Cow position: chr28:32300912-32300212 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 83

Conread position: 51-611
Cow position: chr28:10642558-10642018 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 71

Conread position: 51-661
Cow position: chr28:8022648-8022057 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 82

Conread position: 56-558
Cow position: chr28:22322719-22323214 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 73

Conread position: 57-777
Cow position: chr28:21104376-21103658 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 94

Conread position: 67-800
Cow position: chr28:16215416-16214675 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 34

Conread position: 101-729
Cow position: chr28:34151028-34150431 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 40

Conread position: 109-647
Cow position: chr28:18790535-18791047 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 42

Conread position: 159-815
Cow position: chr28:10589463-10588803 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 48

Conread position: 164-502
Cow position: chr28:22208959-22208629 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 43

Conread position: 164-798
Cow position: chr28:5475459-5474843 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 43

Conread position: 178-800
Cow position: chr28:3770094-3769473 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 97

Conread position: 179-782
Cow position: chr28:15677468-15678060 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 28

Conread position: 205-634
Cow position: chr28:4587702-4588118 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 14

Conread position: 210-668
Cow position: chr28:18463016-18462560 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 67

Conread position: 211-661
Cow position: chr28:10744815-10745259 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 19

Conread position: 216-650
Cow position: chr28:30977900-30978306 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 59

Conread position: 219-575
Cow position: chr28:13356963-13356613 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 33

Conread position: 220-799
Cow position: chr28:25563696-25564276 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 55

Conread position: 237-505
Cow position: chr28:11759902-11759642 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 38

Conread position: 250-592
Cow position: chr28:14493190-14493521 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 25

Conread position: 250-640
Cow position: chr28:34878321-34877943 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 250, 25

Conread position: 252-737
Cow position: chr28:23231415-23230957 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 23

Conread position: 253-693
Cow position: chr28:16686685-16687111 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 24

Conread position: 272-595
Cow position: chr28:7590514-7590200 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 68, 40

Conread position: 274-502
Cow position: chr28:34598246-34598473 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 67, 111

Conread position: 281-668
Cow position: chr28:7512912-7512532 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 56

Conread position: 292-782
Cow position: chr28:24343061-24343545 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 325
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 220, 34

Conread position: 305-790
Cow position: chr28:23008026-23007542 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 140

Conread position: 311-772
Cow position: chr28:29455944-29455505 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 15

Conread position: 316-725
Cow position: chr28:31872034-31871640 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 70

Conread position: 327-804
Cow position: chr28:23410599-23410121 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 330
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 11

Conread position: 330-599
Cow position: chr28:15263997-15263731 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 22

Conread position: 332-725
Cow position: chr28:27218051-27218439 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 264
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 334, 13

Conread position: 332-783
Cow position: chr28:9177024-9176585 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 53

Conread position: 335-637
Cow position: chr28:8084430-8084725 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 194
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 93, 86

Conread position: 335-738
Cow position: chr28:19133516-19133904 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 50

Conread position: 336-797
Cow position: chr28:20963796-20963339 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 17

Conread position: 338-788
Cow position: chr28:9822237-9821797 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 47

Conread position: 341-630
Cow position: chr28:15688780-15689058 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 341-664
Cow position: chr28:15498479-15498157 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 44

Conread position: 341-712
Cow position: chr28:13176940-13176584 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 251
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 229, 44

Conread position: 341-790
Cow position: chr28:26719099-26719530 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 314
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 325, 37

Conread position: 342-736
Cow position: chr28:10172674-10172290 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 256
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 235, 49

Conread position: 343-805
Cow position: chr28:23621289-23621731 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 36

Conread position: 345-788
Cow position: chr28:2518094-2517641 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 311
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 119, 40

Conread position: 347-725
Cow position: chr28:27659951-27659574 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 267
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 141, 35

Conread position: 347-742
Cow position: chr28:21873517-21873893 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 38

Conread position: 347-784
Cow position: chr28:13865590-13866017 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 300
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 187, 38

Conread position: 350-585
Cow position: chr28:13242076-13241855 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 362-781
Cow position: chr28:11501132-11500709 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 23

Conread position: 368-576
Cow position: chr28:26340102-26340306 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 140
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 368-718
Cow position: chr28:11884757-11884411 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 192, 23

Conread position: 371-725
Cow position: chr28:5144754-5144404 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 241
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 21

Conread position: 372-647
Cow position: chr28:9099704-9099967 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 19

Conread position: 374-797
Cow position: chr28:4275062-4274657 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 79

Conread position: 385-790
Cow position: chr28:6643497-6643099 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 284
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 26

Conread position: 385-809
Cow position: chr28:11006957-11007399 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 121

Conread position: 386-762
Cow position: chr28:15082142-15081768 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 9

Conread position: 394-664
Cow position: chr28:3714591-3714849 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 396-712
Cow position: chr28:4098637-4098934 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 40

Conread position: 413-736
Cow position: chr28:26982938-26982611 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 165

Conread position: 415-683
Cow position: chr28:23724645-23724394 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 255, 37

Conread position: 442-694
Cow position: chr28:15577425-15577177 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 209, 14

Conread position: 443-791
Cow position: chr28:23668949-23668603 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 229, 17

Conread position: 446-790
Cow position: chr28:33285276-33284928 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 58

Conread position: 452-801
Cow position: chr28:616228-616580 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 227
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 231, 52

Conread position: 468-782
Cow position: chr28:4763734-4764050 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 38

Conread position: 479-756
Cow position: chr28:32845063-32844786 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 22

Conread position: 490-790
Cow position: chr28:5406435-5406723 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 115, 26

Conread position: 498-729
Cow position: chr28:13255989-13255754 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 28

Conread position: 500-797
Cow position: chr28:11181275-11180977 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 48

Conread position: 506-782
Cow position: chr28:9237210-9237487 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 160, 20

Conread position: 507-735
Cow position: chr28:12047023-12046786 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 519-790
Cow position: chr28:19253386-19253659 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 151, 187

Conread position: 524-801
Cow position: chr28:1202329-1202057 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 143, 48

Conread position: 528-788
Cow position: chr28:7540244-7539979 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 143, 67

Conread position: 531-707
Cow position: chr28:4406170-4406343 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 29

Conread position: 531-766
Cow position: chr28:25340201-25340427 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 140, 48

Conread position: 543-800
Cow position: chr28:31166055-31165791 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 127, 0

Conread position: 563-783
Cow position: chr28:20275077-20275301 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 107, 198

Conread position: 580-801
Cow position: chr28:8789122-8789344 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 23

Conread position: 581-765
Cow position: chr28:8335927-8336118 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 586-800
Cow position: chr28:1608160-1608381 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 10

Conread position: 603-800
Cow position: chr28:31373096-31373296 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 53

Conread position: 670-801
Cow position: chr28:12942507-12942640 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 674-800
Cow position: chr28:22498439-22498563 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 108, 0

Show alignments to all cow chromosomes.