Cow genome map

Conread name: Pig4-TMW8022I05

Conread position: 30-759
Cow position: chr4:54147062-54146329 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 107

Conread position: 34-660
Cow position: chr4:11201253-11201852 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 578, 15

Conread position: 35-500
Cow position: chr4:33366791-33366349 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 9

Conread position: 35-502
Cow position: chr4:52601491-52601941 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 8

Conread position: 35-558
Cow position: chr4:2190906-2190406 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 9

Conread position: 35-623
Cow position: chr4:46862151-46861598 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 107

Conread position: 35-647
Cow position: chr4:16642207-16642792 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 9

Conread position: 35-647
Cow position: chr4:61242660-61243242 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 9

Conread position: 35-660
Cow position: chr4:33069450-33068849 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 9

Conread position: 35-789
Cow position: chr4:65842327-65841605 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 10

Conread position: 37-588
Cow position: chr4:14159687-14159163 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 102

Conread position: 44-576
Cow position: chr4:30573899-30574402 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 35

Conread position: 44-588
Cow position: chr4:23853641-23854153 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 92

Conread position: 44-788
Cow position: chr4:58834962-58834232 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 30

Conread position: 44-800
Cow position: chr4:25369550-25370291 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 97

Conread position: 45-501
Cow position: chr4:43896099-43895652 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 91

Conread position: 45-646
Cow position: chr4:38181134-38181700 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 45-661
Cow position: chr4:28399961-28399384 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 95

Conread position: 45-797
Cow position: chr4:25972336-25973074 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 91

Conread position: 45-798
Cow position: chr4:2121954-2121222 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 91

Conread position: 45-798
Cow position: chr4:36812830-36813553 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 76

Conread position: 45-805
Cow position: chr4:21073733-21072972 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 108

Conread position: 50-528
Cow position: chr4:38309690-38309227 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 91

Conread position: 51-669
Cow position: chr4:16340145-16339563 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 76

Conread position: 51-777
Cow position: chr4:242683-243387 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 27

Conread position: 51-799
Cow position: chr4:28378202-28377497 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 48

Conread position: 56-612
Cow position: chr4:42480641-42481173 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 15

Conread position: 56-716
Cow position: chr4:47730328-47730953 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 532, 29

Conread position: 56-801
Cow position: chr4:49794136-49794848 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 80

Conread position: 56-809
Cow position: chr4:2609693-2610408 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 80

Conread position: 58-646
Cow position: chr4:46711195-46710627 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 79

Conread position: 59-663
Cow position: chr4:14471111-14470535 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 84

Conread position: 59-799
Cow position: chr4:10992751-10992023 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 77

Conread position: 64-668
Cow position: chr4:28835993-28836576 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 72

Conread position: 77-562
Cow position: chr4:24432117-24432579 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 59

Conread position: 78-805
Cow position: chr4:3439867-3440596 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 58

Conread position: 85-631
Cow position: chr4:3475098-3475633 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 12

Conread position: 85-631
Cow position: chr4:53832534-53833049 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 48

Conread position: 86-798
Cow position: chr4:6166854-6166137 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 50

Conread position: 153-782
Cow position: chr4:22115131-22115766 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 58

Conread position: 159-669
Cow position: chr4:15623386-15623891 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 116

Conread position: 159-730
Cow position: chr4:23494459-23495032 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 129

Conread position: 159-736
Cow position: chr4:41301465-41300883 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 125

Conread position: 159-759
Cow position: chr4:26400507-26401093 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 43

Conread position: 159-794
Cow position: chr4:45235323-45234699 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 113

Conread position: 159-798
Cow position: chr4:58707635-58706998 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 48

Conread position: 159-799
Cow position: chr4:27997233-27997872 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 60

Conread position: 160-668
Cow position: chr4:27276992-27276504 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 46

Conread position: 160-790
Cow position: chr4:45918578-45919202 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 115

Conread position: 161-638
Cow position: chr4:16638035-16637594 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 320
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 5, 47

Conread position: 164-502
Cow position: chr4:17283009-17282679 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 14

Conread position: 166-729
Cow position: chr4:23382250-23381710 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 59

Conread position: 167-596
Cow position: chr4:15635885-15635476 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 293
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 174, 47

Conread position: 176-664
Cow position: chr4:66256254-66256722 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 321
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 193, 37

Conread position: 177-517
Cow position: chr4:3450556-3450881 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 177-728
Cow position: chr4:61304858-61304306 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 98

Conread position: 179-651
Cow position: chr4:5623629-5623178 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 318
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 177, 83

Conread position: 182-668
Cow position: chr4:25889281-25888792 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 89

Conread position: 199-788
Cow position: chr4:19306844-19307421 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 20

Conread position: 213-729
Cow position: chr4:25906727-25906232 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 30

Conread position: 217-502
Cow position: chr4:42498136-42498417 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 125, 11

Conread position: 217-570
Cow position: chr4:21058787-21058438 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 13

Conread position: 219-647
Cow position: chr4:5984442-5984027 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 57

Conread position: 220-777
Cow position: chr4:13694063-13693512 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 372
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 121, 35

Conread position: 220-790
Cow position: chr4:23311655-23311101 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 55

Conread position: 220-791
Cow position: chr4:21064644-21065213 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 14

Conread position: 220-800
Cow position: chr4:53207913-53208480 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 387
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 120, 57

Conread position: 228-778
Cow position: chr4:65116599-65116037 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 47

Conread position: 234-647
Cow position: chr4:58823301-58822896 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 274
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 108, 41

Conread position: 234-652
Cow position: chr4:43866228-43865831 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 42

Conread position: 241-558
Cow position: chr4:3388174-3388480 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 100, 34

Conread position: 241-731
Cow position: chr4:12700729-12700231 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 35

Conread position: 246-794
Cow position: chr4:65406724-65406204 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 27

Conread position: 248-630
Cow position: chr4:1915942-1915576 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 27

Conread position: 252-585
Cow position: chr4:18489755-18489425 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 23

Conread position: 252-799
Cow position: chr4:22528744-22528211 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 23

Conread position: 263-651
Cow position: chr4:53763467-53763102 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 372, 12

Conread position: 265-800
Cow position: chr4:49001651-49001132 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 10

Conread position: 272-663
Cow position: chr4:42424144-42423770 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 27

Conread position: 272-664
Cow position: chr4:19265229-19265609 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 107

Conread position: 272-789
Cow position: chr4:44496042-44496548 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 354
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 72, 49

Conread position: 290-736
Cow position: chr4:34208602-34209049 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 286
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 50, 104

Conread position: 290-790
Cow position: chr4:37915655-37915151 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 345
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 51, 79

Conread position: 292-731
Cow position: chr4:59833611-59834036 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 99

Conread position: 300-712
Cow position: chr4:45738795-45738382 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 285
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 123, 36

Conread position: 302-798
Cow position: chr4:6208141-6208631 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 339
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 154

Conread position: 316-502
Cow position: chr4:46385878-46385693 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 70

Conread position: 320-725
Cow position: chr4:18095969-18095569 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 279
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 130, 16

Conread position: 321-798
Cow position: chr4:53752222-53752705 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 44

Conread position: 322-751
Cow position: chr4:9845631-9846043 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 42

Conread position: 326-808
Cow position: chr4:11021940-11021477 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 304
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 52, 66

Conread position: 327-725
Cow position: chr4:39128242-39128642 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 25

Conread position: 329-711
Cow position: chr4:23509299-23509685 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 263
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 19, 65

Conread position: 332-706
Cow position: chr4:620436-620049 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 265
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 27

Conread position: 335-756
Cow position: chr4:20279060-20279462 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 43

Conread position: 340-535
Cow position: chr4:29527448-29527259 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 67, 11

Conread position: 340-800
Cow position: chr4:51122782-51123250 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 340-804
Cow position: chr4:24187894-24187419 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 39

Conread position: 341-575
Cow position: chr4:44073044-44072816 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 341-651
Cow position: chr4:9912454-9912753 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 75, 66

Conread position: 341-709
Cow position: chr4:36755475-36755828 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 341-729
Cow position: chr4:7213859-7213490 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 44

Conread position: 341-729
Cow position: chr4:58948190-58947813 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 72

Conread position: 341-739
Cow position: chr4:61624864-61624468 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 44

Conread position: 341-810
Cow position: chr4:46083170-46082724 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 44

Conread position: 342-709
Cow position: chr4:33030288-33030638 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 60, 37

Conread position: 343-668
Cow position: chr4:58261425-58261110 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 225, 35

Conread position: 343-711
Cow position: chr4:33395960-33395606 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 324, 34

Conread position: 345-646
Cow position: chr4:488711-488404 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 78, 48

Conread position: 346-791
Cow position: chr4:52225740-52226173 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 39

Conread position: 347-725
Cow position: chr4:23066036-23065676 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 126, 38

Conread position: 347-725
Cow position: chr4:46597115-46597473 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 296, 38

Conread position: 350-794
Cow position: chr4:21365149-21365578 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 28

Conread position: 351-549
Cow position: chr4:36396388-36396199 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 351-782
Cow position: chr4:5797703-5798125 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 104

Conread position: 351-790
Cow position: chr4:22249707-22249281 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 31

Conread position: 351-790
Cow position: chr4:31348458-31348013 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 292
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 246, 40

Conread position: 351-800
Cow position: chr4:18439837-18439397 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 34

Conread position: 351-800
Cow position: chr4:40823379-40822933 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 40

Conread position: 351-802
Cow position: chr4:35471068-35471497 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 31

Conread position: 352-756
Cow position: chr4:68795568-68795162 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 26

Conread position: 353-794
Cow position: chr4:31172404-31172845 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 153

Conread position: 353-802
Cow position: chr4:35869953-35870384 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 32

Conread position: 354-635
Cow position: chr4:26541470-26541742 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 355-647
Cow position: chr4:62983813-62983534 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 189
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 355-709
Cow position: chr4:51408225-51407887 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 242
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 36, 24

Conread position: 357-791
Cow position: chr4:30131103-30131505 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 25

Conread position: 358-755
Cow position: chr4:45367479-45367874 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 269
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 308, 24

Conread position: 360-788
Cow position: chr4:27372111-27371698 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 18

Conread position: 361-669
Cow position: chr4:24688603-24688304 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 214, 30

Conread position: 363-524
Cow position: chr4:40434387-40434233 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 368-507
Cow position: chr4:18522081-18521945 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 368-647
Cow position: chr4:21233118-21232855 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 241, 25

Conread position: 368-790
Cow position: chr4:29291275-29291693 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 294
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 283, 23

Conread position: 375-712
Cow position: chr4:11897542-11897213 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 218
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 112

Conread position: 376-712
Cow position: chr4:13406464-13406800 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 128

Conread position: 381-661
Cow position: chr4:11331853-11332127 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 12

Conread position: 382-725
Cow position: chr4:21258981-21259317 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 70

Conread position: 384-725
Cow position: chr4:2601997-2602335 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 282, 84

Conread position: 386-790
Cow position: chr4:9547747-9548121 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 276
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 6, 19

Conread position: 390-789
Cow position: chr4:36945419-36945026 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 62

Conread position: 390-798
Cow position: chr4:41602621-41603019 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 62

Conread position: 395-766
Cow position: chr4:16762954-16762583 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 249
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 85, 110

Conread position: 398-791
Cow position: chr4:58858381-58858008 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 268, 15

Conread position: 401-753
Cow position: chr4:38935142-38935490 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 229
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 264, 64

Conread position: 401-790
Cow position: chr4:39767129-39767518 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 125

Conread position: 403-737
Cow position: chr4:5554007-5553680 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 101

Conread position: 404-756
Cow position: chr4:40623309-40622968 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 41

Conread position: 405-749
Cow position: chr4:45952586-45952260 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 266, 101

Conread position: 407-710
Cow position: chr4:61171693-61171988 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 228, 96

Conread position: 407-797
Cow position: chr4:9681091-9681485 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 260
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 238, 17

Conread position: 408-725
Cow position: chr4:68634754-68635053 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 7, 35

Conread position: 410-774
Cow position: chr4:36075968-36075617 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 19, 31

Conread position: 419-714
Cow position: chr4:43515524-43515811 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 237, 85

Conread position: 425-699
Cow position: chr4:21162472-21162741 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 50

Conread position: 427-641
Cow position: chr4:42347478-42347266 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 435-790
Cow position: chr4:50769950-50769598 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 21

Conread position: 436-800
Cow position: chr4:23758619-23758980 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 68

Conread position: 442-651
Cow position: chr4:15784988-15784784 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 149, 81

Conread position: 447-680
Cow position: chr4:41154470-41154701 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 219, 57

Conread position: 453-800
Cow position: chr4:10837548-10837203 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 50

Conread position: 457-800
Cow position: chr4:30671569-30671236 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 107, 47

Conread position: 458-800
Cow position: chr4:23166741-23167076 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 69

Conread position: 473-799
Cow position: chr4:52087787-52088104 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 163, 35

Conread position: 473-815
Cow position: chr4:5580409-5580751 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 237
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 196, 31

Conread position: 474-790
Cow position: chr4:48409413-48409098 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 208
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 164, 29

Conread position: 479-789
Cow position: chr4:37880790-37881099 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 188, 15

Conread position: 488-789
Cow position: chr4:13026165-13026480 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 27

Conread position: 490-782
Cow position: chr4:30770-30479 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 44, 55

Conread position: 490-783
Cow position: chr4:20066352-20066060 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 181, 36

Conread position: 490-801
Cow position: chr4:5913480-5913166 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 146, 35

Conread position: 499-798
Cow position: chr4:34700163-34699849 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 210
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 35

Conread position: 503-790
Cow position: chr4:21250147-21249859 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 164, 23

Conread position: 509-815
Cow position: chr4:22235215-22235519 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 99, 6

Conread position: 513-742
Cow position: chr4:19729210-19728983 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 134, 9

Conread position: 514-700
Cow position: chr4:48283390-48283202 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 13

Conread position: 514-790
Cow position: chr4:29709873-29709591 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 74, 12

Conread position: 515-797
Cow position: chr4:40434012-40433730 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 151, 11

Conread position: 524-725
Cow position: chr4:12995864-12996060 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 151, 20

Conread position: 528-790
Cow position: chr4:28065842-28065581 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 24

Conread position: 540-756
Cow position: chr4:5002678-5002899 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 130, 41

Conread position: 547-798
Cow position: chr4:184213-184464 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 166
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 48

Conread position: 552-788
Cow position: chr4:60030832-60031070 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 113, 43

Conread position: 555-792
Cow position: chr4:3267934-3267699 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 86, 39

Conread position: 567-800
Cow position: chr4:37035296-37035056 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 35

Conread position: 573-790
Cow position: chr4:1799855-1800074 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 96

Conread position: 581-782
Cow position: chr4:38877715-38877928 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 55

Conread position: 581-800
Cow position: chr4:47445882-47446086 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 594-799
Cow position: chr4:17304427-17304213 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 595-800
Cow position: chr4:44279969-44279757 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 597-790
Cow position: chr4:65604499-65604306 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 22

Conread position: 597-800
Cow position: chr4:24415535-24415733 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 50, 62

Conread position: 608-782
Cow position: chr4:9799986-9800163 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 622-789
Cow position: chr4:51433404-51433578 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 639-802
Cow position: chr4:45115768-45115600 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 159

Conread position: 671-799
Cow position: chr4:10463877-10463749 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 674-815
Cow position: chr4:63417648-63417512 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 83, 0

Show alignments to all cow chromosomes.