• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Pig4-TMW8022I05
        

               
Conread position:
               
24-775
               

               
Cow position:
               
chr9:9200122-9200854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
33-760
               

               
Cow position:
               
chr9:38546994-38546301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
556, 12
               

               
Conread position:
               
35-502
               

               
Cow position:
               
chr9:10326793-10327245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 9
               

               
Conread position:
               
35-698
               

               
Cow position:
               
chr9:34696708-34697355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 8
               

               
Conread position:
               
35-725
               

               
Cow position:
               
chr9:22443027-22443710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 9
               

               
Conread position:
               
35-736
               

               
Cow position:
               
chr9:8998930-8998256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 8
               

               
Conread position:
               
36-800
               

               
Cow position:
               
chr9:25469613-25468896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
44-502
               

               
Cow position:
               
chr9:10857599-10858030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 61
               

               
Conread position:
               
44-588
               

               
Cow position:
               
chr9:1983926-1984466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 99
               

               
Conread position:
               
44-591
               

               
Cow position:
               
chr9:32812914-32812400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 99
               

               
Conread position:
               
44-634
               

               
Cow position:
               
chr9:20988861-20989434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
44-634
               

               
Cow position:
               
chr9:34000033-34000604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 99
               

               
Conread position:
               
44-668
               

               
Cow position:
               
chr9:35904174-35904763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 87
               

               
Conread position:
               
44-712
               

               
Cow position:
               
chr9:46316209-46316852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 92
               

               
Conread position:
               
44-744
               

               
Cow position:
               
chr9:23388097-23388774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 94
               

               
Conread position:
               
44-798
               

               
Cow position:
               
chr9:19382916-19382176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
544
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 96
               

               
Conread position:
               
44-798
               

               
Cow position:
               
chr9:21462259-21463023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
788
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 92
               

               
Conread position:
               
44-803
               

               
Cow position:
               
chr9:43038092-43037322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
788
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 111
               

               
Conread position:
               
45-622
               

               
Cow position:
               
chr9:8612881-8612306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 49
               

               
Conread position:
               
45-700
               

               
Cow position:
               
chr9:49301757-49301102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 82
               

               
Conread position:
               
45-717
               

               
Cow position:
               
chr9:34092816-34093506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
45-742
               

               
Cow position:
               
chr9:4859129-4858437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 91
               

               
Conread position:
               
45-743
               

               
Cow position:
               
chr9:3959633-3958966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 91
               

               
Conread position:
               
45-783
               

               
Cow position:
               
chr9:48773909-48773213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
606, 91
               

               
Conread position:
               
45-801
               

               
Cow position:
               
chr9:28726151-28726905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
46-788
               

               
Cow position:
               
chr9:56861611-56860871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 183
               

               
Conread position:
               
46-790
               

               
Cow position:
               
chr9:39428230-39428947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 90
               

               
Conread position:
               
49-712
               

               
Cow position:
               
chr9:52632940-52633560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
617, 92
               

               
Conread position:
               
49-791
               

               
Cow position:
               
chr9:18110273-18111009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
51-614
               

               
Cow position:
               
chr9:8600937-8600362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 86
               

               
Conread position:
               
51-747
               

               
Cow position:
               
chr9:3932537-3931858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 48
               

               
Conread position:
               
51-766
               

               
Cow position:
               
chr9:47926482-47925800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 85
               

               
Conread position:
               
53-791
               

               
Cow position:
               
chr9:34310612-34309880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 21
               

               
Conread position:
               
70-790
               

               
Cow position:
               
chr9:28948413-28947720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 82
               

               
Conread position:
               
78-778
               

               
Cow position:
               
chr9:10127119-10127802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 50
               

               
Conread position:
               
85-790
               

               
Cow position:
               
chr9:29809001-29808309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
437, 14
               

               
Conread position:
               
85-799
               

               
Cow position:
               
chr9:3388229-3387541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 58
               

               
Conread position:
               
97-576
               

               
Cow position:
               
chr9:8998083-8997620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 54
               

               
Conread position:
               
106-575
               

               
Cow position:
               
chr9:42585111-42585559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 37
               

               
Conread position:
               
113-576
               

               
Cow position:
               
chr9:52504793-52505240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
159-575
               

               
Cow position:
               
chr9:31639845-31640251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
159-599
               

               
Cow position:
               
chr9:12428035-12428459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 50
               

               
Conread position:
               
159-760
               

               
Cow position:
               
chr9:18093178-18093760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
159-790
               

               
Cow position:
               
chr9:32265916-32266533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 6
               

               
Conread position:
               
159-797
               

               
Cow position:
               
chr9:34204601-34203975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 37
               

               
Conread position:
               
160-734
               

               
Cow position:
               
chr9:11870685-11870116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
164-502
               

               
Cow position:
               
chr9:10940281-10940611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 50
               

               
Conread position:
               
167-714
               

               
Cow position:
               
chr9:44108363-44108905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 189
               

               
Conread position:
               
172-790
               

               
Cow position:
               
chr9:64092142-64091533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 35
               

               
Conread position:
               
173-668
               

               
Cow position:
               
chr9:5141536-5141054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 23
               

               
Conread position:
               
177-667
               

               
Cow position:
               
chr9:3724603-3725082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 34
               

               
Conread position:
               
177-787
               

               
Cow position:
               
chr9:14185146-14184526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
178-707
               

               
Cow position:
               
chr9:8534233-8534756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 29
               

               
Conread position:
               
178-725
               

               
Cow position:
               
chr9:22433490-22434011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 36
               

               
Conread position:
               
180-709
               

               
Cow position:
               
chr9:214006-214527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 95
               

               
Conread position:
               
203-759
               

               
Cow position:
               
chr9:15950708-15951276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 72
               

               
Conread position:
               
204-797
               

               
Cow position:
               
chr9:28983615-28983027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 24
               

               
Conread position:
               
212-798
               

               
Cow position:
               
chr9:20038736-20039284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 63
               

               
Conread position:
               
217-549
               

               
Cow position:
               
chr9:37967530-37967199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
217-575
               

               
Cow position:
               
chr9:30664363-30664712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
220-712
               

               
Cow position:
               
chr9:20848354-20847864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 55
               

               
Conread position:
               
222-515
               

               
Cow position:
               
chr9:36586408-36586691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
229-775
               

               
Cow position:
               
chr9:59386372-59386903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 46
               

               
Conread position:
               
234-798
               

               
Cow position:
               
chr9:54205923-54206484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
240-647
               

               
Cow position:
               
chr9:25964427-25964830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
241-756
               

               
Cow position:
               
chr9:3169123-3169636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 34
               

               
Conread position:
               
250-632
               

               
Cow position:
               
chr9:5621641-5622020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
260-709
               

               
Cow position:
               
chr9:56253278-56252834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
272-790
               

               
Cow position:
               
chr9:5433997-5433479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 111
               

               
Conread position:
               
283-665
               

               
Cow position:
               
chr9:21030672-21030293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
284-616
               

               
Cow position:
               
chr9:2034522-2034206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
287-728
               

               
Cow position:
               
chr9:2113659-2114092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
287-790
               

               
Cow position:
               
chr9:39152336-39152827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 99
               

               
Conread position:
               
290-632
               

               
Cow position:
               
chr9:5226817-5227155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
292-502
               

               
Cow position:
               
chr9:27476236-27476032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 92
               

               
Conread position:
               
305-711
               

               
Cow position:
               
chr9:54924964-54924551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
305-737
               

               
Cow position:
               
chr9:44218094-44217678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
311-688
               

               
Cow position:
               
chr9:23527475-23527831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 19
               

               
Conread position:
               
315-616
               

               
Cow position:
               
chr9:41416673-41416379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
323-790
               

               
Cow position:
               
chr9:9957137-9956693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
324-799
               

               
Cow position:
               
chr9:59924857-59924395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
326-603
               

               
Cow position:
               
chr9:36490583-36490846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
326-801
               

               
Cow position:
               
chr9:42172886-42173341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 45
               

               
Conread position:
               
332-588
               

               
Cow position:
               
chr9:10011108-10010860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
335-650
               

               
Cow position:
               
chr9:50295722-50296035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
261, 37
               

               
Conread position:
               
335-725
               

               
Cow position:
               
chr9:64105268-64104860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
335-756
               

               
Cow position:
               
chr9:64007560-64007994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
204, 50
               

               
Conread position:
               
337-731
               

               
Cow position:
               
chr9:52001305-52000930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
160, 16
               

               
Conread position:
               
339-790
               

               
Cow position:
               
chr9:50544335-50544783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 46
               

               
Conread position:
               
340-601
               

               
Cow position:
               
chr9:27052036-27052292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
340-666
               

               
Cow position:
               
chr9:34762556-34762867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
340-693
               

               
Cow position:
               
chr9:27310456-27310805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
107, 45
               

               
Conread position:
               
340-725
               

               
Cow position:
               
chr9:55084000-55084384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 51
               

               
Conread position:
               
340-781
               

               
Cow position:
               
chr9:8951199-8950758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 38
               

               
Conread position:
               
340-815
               

               
Cow position:
               
chr9:30020276-30019813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
341-749
               

               
Cow position:
               
chr9:51311966-51311567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
341-782
               

               
Cow position:
               
chr9:25546928-25546499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
342-798
               

               
Cow position:
               
chr9:4861684-4861222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 34
               

               
Conread position:
               
343-686
               

               
Cow position:
               
chr9:52787242-52787582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 42
               

               
Conread position:
               
343-790
               

               
Cow position:
               
chr9:56453626-56453180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
343-791
               

               
Cow position:
               
chr9:58669674-58669233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
343-802
               

               
Cow position:
               
chr9:10666731-10667181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
344-598
               

               
Cow position:
               
chr9:36067198-36066956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
190, 34
               

               
Conread position:
               
344-714
               

               
Cow position:
               
chr9:32625286-32624936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
327, 11
               

               
Conread position:
               
344-790
               

               
Cow position:
               
chr9:35708329-35708766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 76
               

               
Conread position:
               
346-780
               

               
Cow position:
               
chr9:34468302-34468715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
188, 39
               

               
Conread position:
               
348-748
               

               
Cow position:
               
chr9:61195588-61195174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
143, 31
               

               
Conread position:
               
348-799
               

               
Cow position:
               
chr9:43912218-43911777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 37
               

               
Conread position:
               
349-714
               

               
Cow position:
               
chr9:11201867-11201518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 36
               

               
Conread position:
               
355-666
               

               
Cow position:
               
chr9:31587815-31588119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
356-778
               

               
Cow position:
               
chr9:20839897-20839493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
358-593
               

               
Cow position:
               
chr9:17806273-17806050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
359-804
               

               
Cow position:
               
chr9:16745955-16745520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 26
               

               
Conread position:
               
361-789
               

               
Cow position:
               
chr9:19637363-19637784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
106, 9
               

               
Conread position:
               
363-797
               

               
Cow position:
               
chr9:32732411-32732834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
317, 19
               

               
Conread position:
               
365-801
               

               
Cow position:
               
chr9:23043047-23042624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
273, 20
               

               
Conread position:
               
369-735
               

               
Cow position:
               
chr9:9753128-9753483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
165, 20
               

               
Conread position:
               
373-593
               

               
Cow position:
               
chr9:63905336-63905554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 163
               

               
Conread position:
               
373-664
               

               
Cow position:
               
chr9:29108801-29108523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
379-645
               

               
Cow position:
               
chr9:24399425-24399680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
385-647
               

               
Cow position:
               
chr9:3186395-3186129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
385-715
               

               
Cow position:
               
chr9:44553001-44552674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 67
               

               
Conread position:
               
386-702
               

               
Cow position:
               
chr9:13845989-13845679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
386-782
               

               
Cow position:
               
chr9:8657180-8657570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
6, 118
               

               
Conread position:
               
396-637
               

               
Cow position:
               
chr9:40604193-40603958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
110, 74
               

               
Conread position:
               
401-782
               

               
Cow position:
               
chr9:15006513-15006886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 103
               

               
Conread position:
               
407-669
               

               
Cow position:
               
chr9:42901279-42901026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
185, 32
               

               
Conread position:
               
408-661
               

               
Cow position:
               
chr9:33038227-33038472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
408-736
               

               
Cow position:
               
chr9:8618023-8617725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
263, 54
               

               
Conread position:
               
410-791
               

               
Cow position:
               
chr9:32816905-32817289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 42
               

               
Conread position:
               
417-714
               

               
Cow position:
               
chr9:11364115-11363825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
427-788
               

               
Cow position:
               
chr9:15684576-15684932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
433-786
               

               
Cow position:
               
chr9:32848097-32847746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 19
               

               
Conread position:
               
436-765
               

               
Cow position:
               
chr9:46242061-46242378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
444-801
               

               
Cow position:
               
chr9:42037852-42037495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
451-800
               

               
Cow position:
               
chr9:48133921-48133576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
454-804
               

               
Cow position:
               
chr9:27292094-27292441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
455-788
               

               
Cow position:
               
chr9:9823318-9823645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
456-752
               

               
Cow position:
               
chr9:34106909-34106604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
179, 50
               

               
Conread position:
               
456-790
               

               
Cow position:
               
chr9:23943480-23943120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 339
               

               
Conread position:
               
456-800
               

               
Cow position:
               
chr9:5575506-5575161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
206, 59
               

               
Conread position:
               
468-730
               

               
Cow position:
               
chr9:35368815-35368557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
468-803
               

               
Cow position:
               
chr9:46252985-46252662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
201, 36
               

               
Conread position:
               
470-664
               

               
Cow position:
               
chr9:8901051-8901241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 14
               

               
Conread position:
               
470-767
               

               
Cow position:
               
chr9:41957977-41957682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
479-789
               

               
Cow position:
               
chr9:20897065-20896754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
479-794
               

               
Cow position:
               
chr9:24837692-24837390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 12
               

               
Conread position:
               
490-790
               

               
Cow position:
               
chr9:3845064-3845347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
162, 13
               

               
Conread position:
               
493-791
               

               
Cow position:
               
chr9:5172483-5172185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
495-791
               

               
Cow position:
               
chr9:6203646-6203933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
152, 31
               

               
Conread position:
               
497-797
               

               
Cow position:
               
chr9:58698962-58699282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
92, 30
               

               
Conread position:
               
500-665
               

               
Cow position:
               
chr9:32809592-32809759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 101
               

               
Conread position:
               
505-800
               

               
Cow position:
               
chr9:55562642-55562338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
506-800
               

               
Cow position:
               
chr9:33668868-33668568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
510-793
               

               
Cow position:
               
chr9:15034043-15033757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
512-800
               

               
Cow position:
               
chr9:32115472-32115756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
514-796
               

               
Cow position:
               
chr9:33059151-33059425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
516-762
               

               
Cow position:
               
chr9:50598185-50598432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
58, 136
               

               
Conread position:
               
516-800
               

               
Cow position:
               
chr9:50827801-50828079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
157, 87
               

               
Conread position:
               
529-805
               

               
Cow position:
               
chr9:49651841-49651569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
136, 23
               

               
Conread position:
               
535-768
               

               
Cow position:
               
chr9:16118838-16118603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
131, 55
               

               
Conread position:
               
535-778
               

               
Cow position:
               
chr9:34725399-34725643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
135, 166
               

               
Conread position:
               
555-790
               

               
Cow position:
               
chr9:4538765-4539006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
563-791
               

               
Cow position:
               
chr9:17110855-17110625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
105, 70
               

               
Conread position:
               
565-790
               

               
Cow position:
               
chr9:40007940-40007715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
572-767
               

               
Cow position:
               
chr9:5059244-5059439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
102, 23
               

               
Conread position:
               
572-802
               

               
Cow position:
               
chr9:43926037-43926262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
586-799
               

               
Cow position:
               
chr9:12499074-12498854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
606-761
               

               
Cow position:
               
chr9:48576603-48576760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
606-799
               

               
Cow position:
               
chr9:53794488-53794684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
612-798
               

               
Cow position:
               
chr9:9761076-9760889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
613-782
               

               
Cow position:
               
chr9:20668410-20668248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
660-790
               

               
Cow position:
               
chr9:10676391-10676521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
671-801
               

               
Cow position:
               
chr9:6346966-6346838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
675-805
               

               
Cow position:
               
chr9:21566643-21566774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
122, 0
               
Show alignments to all cow chromosomes.