Cow genome map

Conread name: Pig4-TMW8022L20

Conread position: 1-369
Cow position: chr1:20831593-20831222 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 347

Conread position: 1-371
Cow position: chr1:32962412-32962045 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 159

Conread position: 1-373
Cow position: chr1:18962988-18963367 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 152

Conread position: 1-373
Cow position: chr1:40577678-40577294 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 119

Conread position: 1-373
Cow position: chr1:86593564-86593942 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 119

Conread position: 1-375
Cow position: chr1:11855529-11855917 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 335

Conread position: 1-375
Cow position: chr1:53422640-53422250 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 137

Conread position: 1-375
Cow position: chr1:86363204-86362832 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 124

Conread position: 1-375
Cow position: chr1:89493473-89493860 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 167

Conread position: 2-353
Cow position: chr1:61537259-61537623 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 71

Conread position: 2-354
Cow position: chr1:30065099-30064737 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 56, 167

Conread position: 2-369
Cow position: chr1:15437180-15437553 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 159

Conread position: 2-371
Cow position: chr1:85777721-85778088 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 119

Conread position: 2-373
Cow position: chr1:9261243-9260866 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 118

Conread position: 2-374
Cow position: chr1:21995271-21995653 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 353

Conread position: 2-375
Cow position: chr1:26515639-26516013 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 101

Conread position: 2-375
Cow position: chr1:32565189-32565563 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 344

Conread position: 2-375
Cow position: chr1:49971413-49971792 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 258

Conread position: 2-375
Cow position: chr1:57363591-57363976 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 111

Conread position: 2-375
Cow position: chr1:57570576-57570194 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 87

Conread position: 2-375
Cow position: chr1:61342974-61343348 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 156

Conread position: 2-375
Cow position: chr1:73064596-73064979 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 353

Conread position: 2-375
Cow position: chr1:76618732-76619111 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 96

Conread position: 2-375
Cow position: chr1:88676222-88675842 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 350

Conread position: 2-375
Cow position: chr1:90606115-90606495 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 350

Conread position: 2-375
Cow position: chr1:94662417-94662036 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 169

Conread position: 2-375
Cow position: chr1:99916175-99915795 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 350

Conread position: 3-375
Cow position: chr1:28567974-28568347 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 286, 20

Conread position: 3-375
Cow position: chr1:63603047-63603426 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 349

Conread position: 3-378
Cow position: chr1:18195363-18194978 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 228

Conread position: 3-378
Cow position: chr1:58339668-58339286 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 85

Conread position: 6-337
Cow position: chr1:27493711-27493383 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 6-351
Cow position: chr1:88267384-88267727 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 143, 114

Conread position: 6-355
Cow position: chr1:27955721-27956058 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 14

Conread position: 6-375
Cow position: chr1:5504674-5504296 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 50

Conread position: 6-375
Cow position: chr1:40965666-40966037 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 31

Conread position: 7-354
Cow position: chr1:29949075-29949435 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 34

Conread position: 9-341
Cow position: chr1:58171471-58171144 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 78

Conread position: 9-374
Cow position: chr1:59484132-59484497 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 151

Conread position: 9-375
Cow position: chr1:53310969-53310602 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 45

Conread position: 9-375
Cow position: chr1:56191417-56191790 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 343

Conread position: 9-375
Cow position: chr1:66487968-66487586 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 11-350
Cow position: chr1:39538305-39538646 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 16, 147

Conread position: 11-375
Cow position: chr1:86704879-86704511 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 329

Conread position: 13-375
Cow position: chr1:30693807-30693438 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 98

Conread position: 14-343
Cow position: chr1:77165203-77164868 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 43, 94

Conread position: 17-375
Cow position: chr1:36540225-36539870 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 18-347
Cow position: chr1:85825151-85824831 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 133, 78

Conread position: 19-374
Cow position: chr1:81861300-81861655 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 139

Conread position: 19-375
Cow position: chr1:72113727-72113364 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 140

Conread position: 33-388
Cow position: chr1:79913658-79913296 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 230, 71

Conread position: 42-365
Cow position: chr1:77104330-77104664 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 114

Conread position: 42-374
Cow position: chr1:27310335-27310670 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 26

Conread position: 48-375
Cow position: chr1:79254769-79254424 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 97, 0

Conread position: 57-375
Cow position: chr1:81779139-81778814 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 96

Conread position: 71-376
Cow position: chr1:48249570-48249261 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 10

Conread position: 92-375
Cow position: chr1:72086154-72085863 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 22

Conread position: 97-348
Cow position: chr1:18025096-18025356 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 17, 74

Conread position: 166-375
Cow position: chr1:19183730-19183945 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 118, 185

Conread position: 182-371
Cow position: chr1:4210663-4210479 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 131, 72

Show alignments to all cow chromosomes.