Cow genome map
Conread name: | Pig4-TMW8022L20 |
Conread position: | 1-369 |
Cow position: | chr1:20831593-20831222 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 289, 347 |
Conread position: | 1-371 |
Cow position: | chr1:32962412-32962045 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 159 |
Conread position: | 1-373 |
Cow position: | chr1:18962988-18963367 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 281, 152 |
Conread position: | 1-373 |
Cow position: | chr1:40577678-40577294 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 119 |
Conread position: | 1-373 |
Cow position: | chr1:86593564-86593942 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 119 |
Conread position: | 1-375 |
Cow position: | chr1:11855529-11855917 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 335 |
Conread position: | 1-375 |
Cow position: | chr1:53422640-53422250 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 267, 137 |
Conread position: | 1-375 |
Cow position: | chr1:86363204-86362832 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 124 |
Conread position: | 1-375 |
Cow position: | chr1:89493473-89493860 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 167 |
Conread position: | 2-353 |
Cow position: | chr1:61537259-61537623 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 268, 71 |
Conread position: | 2-354 |
Cow position: | chr1:30065099-30064737 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 256 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 56, 167 |
Conread position: | 2-369 |
Cow position: | chr1:15437180-15437553 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 159 |
Conread position: | 2-371 |
Cow position: | chr1:85777721-85778088 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 119 |
Conread position: | 2-373 |
Cow position: | chr1:9261243-9260866 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 118 |
Conread position: | 2-374 |
Cow position: | chr1:21995271-21995653 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 353 |
Conread position: | 2-375 |
Cow position: | chr1:26515639-26516013 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 101 |
Conread position: | 2-375 |
Cow position: | chr1:32565189-32565563 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 241, 344 |
Conread position: | 2-375 |
Cow position: | chr1:49971413-49971792 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 287, 258 |
Conread position: | 2-375 |
Cow position: | chr1:57363591-57363976 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 253, 111 |
Conread position: | 2-375 |
Cow position: | chr1:57570576-57570194 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 280, 87 |
Conread position: | 2-375 |
Cow position: | chr1:61342974-61343348 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 156 |
Conread position: | 2-375 |
Cow position: | chr1:73064596-73064979 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 353 |
Conread position: | 2-375 |
Cow position: | chr1:76618732-76619111 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 96 |
Conread position: | 2-375 |
Cow position: | chr1:88676222-88675842 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 287, 350 |
Conread position: | 2-375 |
Cow position: | chr1:90606115-90606495 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 350 |
Conread position: | 2-375 |
Cow position: | chr1:94662417-94662036 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 169 |
Conread position: | 2-375 |
Cow position: | chr1:99916175-99915795 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 350 |
Conread position: | 3-375 |
Cow position: | chr1:28567974-28568347 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 263 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 286, 20 |
Conread position: | 3-375 |
Cow position: | chr1:63603047-63603426 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 281, 349 |
Conread position: | 3-378 |
Cow position: | chr1:18195363-18194978 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 228 |
Conread position: | 3-378 |
Cow position: | chr1:58339668-58339286 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 85 |
Conread position: | 6-337 |
Cow position: | chr1:27493711-27493383 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 0 |
Conread position: | 6-351 |
Cow position: | chr1:88267384-88267727 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 242 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 143, 114 |
Conread position: | 6-355 |
Cow position: | chr1:27955721-27956058 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 227, 14 |
Conread position: | 6-375 |
Cow position: | chr1:5504674-5504296 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 278, 50 |
Conread position: | 6-375 |
Cow position: | chr1:40965666-40966037 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 31 |
Conread position: | 7-354 |
Cow position: | chr1:29949075-29949435 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 253 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 25, 34 |
Conread position: | 9-341 |
Cow position: | chr1:58171471-58171144 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 229, 78 |
Conread position: | 9-374 |
Cow position: | chr1:59484132-59484497 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 151 |
Conread position: | 9-375 |
Cow position: | chr1:53310969-53310602 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 45 |
Conread position: | 9-375 |
Cow position: | chr1:56191417-56191790 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 268, 343 |
Conread position: | 9-375 |
Cow position: | chr1:66487968-66487586 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 11 |
Conread position: | 11-350 |
Cow position: | chr1:39538305-39538646 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 240 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 16, 147 |
Conread position: | 11-375 |
Cow position: | chr1:86704879-86704511 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 329 |
Conread position: | 13-375 |
Cow position: | chr1:30693807-30693438 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 98 |
Conread position: | 14-343 |
Cow position: | chr1:77165203-77164868 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 244 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 43, 94 |
Conread position: | 17-375 |
Cow position: | chr1:36540225-36539870 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 274, 0 |
Conread position: | 18-347 |
Cow position: | chr1:85825151-85824831 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 229 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 133, 78 |
Conread position: | 19-374 |
Cow position: | chr1:81861300-81861655 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 139 |
Conread position: | 19-375 |
Cow position: | chr1:72113727-72113364 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 140 |
Conread position: | 33-388 |
Cow position: | chr1:79913658-79913296 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 259 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 230, 71 |
Conread position: | 42-365 |
Cow position: | chr1:77104330-77104664 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 114 |
Conread position: | 42-374 |
Cow position: | chr1:27310335-27310670 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 247, 26 |
Conread position: | 48-375 |
Cow position: | chr1:79254769-79254424 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 240 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 57-375 |
Cow position: | chr1:81779139-81778814 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 96 |
Conread position: | 71-376 |
Cow position: | chr1:48249570-48249261 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 10 |
Conread position: | 92-375 |
Cow position: | chr1:72086154-72085863 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 22 |
Conread position: | 97-348 |
Cow position: | chr1:18025096-18025356 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 189 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 17, 74 |
Conread position: | 166-375 |
Cow position: | chr1:19183730-19183945 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 170 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 118, 185 |
Conread position: | 182-371 |
Cow position: | chr1:4210663-4210479 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 148 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 131, 72 |
Show alignments to all cow chromosomes.