Cow genome map
Conread name: | Pig4-TMW8022L20 |
Conread position: | 1-338 |
Cow position: | chr3:21004431-21004087 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 53 |
Conread position: | 1-344 |
Cow position: | chr3:25689270-25688925 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 150 |
Conread position: | 1-347 |
Cow position: | chr3:19946860-19946500 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 11 |
Conread position: | 1-347 |
Cow position: | chr3:57455605-57455265 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 252 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 222, 85 |
Conread position: | 1-349 |
Cow position: | chr3:60675511-60675852 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 219 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 91, 59 |
Conread position: | 1-354 |
Cow position: | chr3:14862822-14862455 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 96 |
Conread position: | 1-373 |
Cow position: | chr3:31021300-31020918 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 352 |
Conread position: | 1-373 |
Cow position: | chr3:66969263-66969644 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 140 |
Conread position: | 1-375 |
Cow position: | chr3:6688431-6688040 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 158 |
Conread position: | 1-375 |
Cow position: | chr3:57742144-57741766 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 209 |
Conread position: | 2-368 |
Cow position: | chr3:57482109-57482480 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 35 |
Conread position: | 2-372 |
Cow position: | chr3:2708254-2708628 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 244 |
Conread position: | 2-373 |
Cow position: | chr3:35611770-35611399 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 238 |
Conread position: | 2-374 |
Cow position: | chr3:30320879-30320498 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 60 |
Conread position: | 2-374 |
Cow position: | chr3:75039229-75039613 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 272, 331 |
Conread position: | 2-375 |
Cow position: | chr3:7477306-7477684 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 163 |
Conread position: | 2-375 |
Cow position: | chr3:10243277-10242891 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 87 |
Conread position: | 2-375 |
Cow position: | chr3:18814123-18813746 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 269, 347 |
Conread position: | 2-375 |
Cow position: | chr3:37627581-37627200 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 117 |
Conread position: | 2-375 |
Cow position: | chr3:38869190-38868818 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 28 |
Conread position: | 2-375 |
Cow position: | chr3:40826013-40825632 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 287, 39 |
Conread position: | 2-375 |
Cow position: | chr3:53518213-53517833 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 322 |
Conread position: | 2-375 |
Cow position: | chr3:56147922-56147545 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 280, 13 |
Conread position: | 2-375 |
Cow position: | chr3:66622831-66622452 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 31 |
Conread position: | 3-375 |
Cow position: | chr3:24356209-24355832 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 88 |
Conread position: | 3-375 |
Cow position: | chr3:59864170-59863801 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 281, 138 |
Conread position: | 3-375 |
Cow position: | chr3:63278018-63278378 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 247, 214 |
Conread position: | 6-375 |
Cow position: | chr3:596733-596367 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 259, 185 |
Conread position: | 6-376 |
Cow position: | chr3:45977115-45976735 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 349 |
Conread position: | 9-371 |
Cow position: | chr3:3525637-3525283 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 304, 217 |
Conread position: | 9-373 |
Cow position: | chr3:6785017-6784645 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 212 |
Conread position: | 22-375 |
Cow position: | chr3:81166874-81167247 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 342 |
Conread position: | 28-346 |
Cow position: | chr3:62787154-62787473 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 228 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 40, 88 |
Conread position: | 32-373 |
Cow position: | chr3:64025544-64025895 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 323 |
Conread position: | 48-374 |
Cow position: | chr3:69963230-69963558 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 299 |
Conread position: | 60-350 |
Cow position: | chr3:53413634-53413346 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 203 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 216, 82 |
Conread position: | 73-375 |
Cow position: | chr3:76004249-76004558 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 279 |
Conread position: | 74-349 |
Cow position: | chr3:3059439-3059150 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 214 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 19, 168 |
Conread position: | 74-374 |
Cow position: | chr3:36876115-36876425 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 280 |
Conread position: | 92-354 |
Cow position: | chr3:46505092-46504820 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 130 |
Conread position: | 93-375 |
Cow position: | chr3:45692470-45692751 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 213 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 156, 20 |
Conread position: | 167-354 |
Cow position: | chr3:14924569-14924374 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 147 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 117, 62 |
Conread position: | 173-375 |
Cow position: | chr3:24637878-24637671 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 160 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 113, 37 |
Show alignments to all cow chromosomes.