Cow genome map
| Conread name: | Pig4-TMW8022L20 |
| Conread position: | 1-346 |
| Cow position: | chr5:46626744-46627097 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 22 |
| Conread position: | 1-354 |
| Cow position: | chr5:32365289-32364942 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 25 |
| Conread position: | 1-371 |
| Cow position: | chr5:445043-444667 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 156 |
| Conread position: | 1-373 |
| Cow position: | chr5:5105747-5105369 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 350 |
| Conread position: | 1-373 |
| Cow position: | chr5:51166784-51167158 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 340 |
| Conread position: | 1-374 |
| Cow position: | chr5:31120684-31121059 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 1-374 |
| Cow position: | chr5:50390596-50390964 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 280 |
| Conread position: | 2-347 |
| Cow position: | chr5:7583486-7583828 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 39, 59 |
| Conread position: | 2-375 |
| Cow position: | chr5:1339402-1339781 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 49 |
| Conread position: | 2-375 |
| Cow position: | chr5:7276355-7275972 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 353 |
| Conread position: | 2-375 |
| Cow position: | chr5:10854294-10854675 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 330 |
| Conread position: | 2-375 |
| Cow position: | chr5:24101172-24100790 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 231 |
| Conread position: | 2-375 |
| Cow position: | chr5:49521241-49520856 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 170 |
| Conread position: | 2-375 |
| Cow position: | chr5:64779482-64779865 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 353 |
| Conread position: | 2-375 |
| Cow position: | chr5:73486401-73486782 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 41 |
| Conread position: | 3-344 |
| Cow position: | chr5:41979996-41979667 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 262 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 52, 29 |
| Conread position: | 3-350 |
| Cow position: | chr5:18884059-18884402 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 241 |
| Conread position: | 3-375 |
| Cow position: | chr5:48226053-48226431 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 204 |
| Conread position: | 6-347 |
| Cow position: | chr5:18275507-18275158 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 34 |
| Conread position: | 6-354 |
| Cow position: | chr5:57888899-57889257 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 37 |
| Conread position: | 6-375 |
| Cow position: | chr5:10921359-10920986 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 41 |
| Conread position: | 9-337 |
| Cow position: | chr5:4353121-4352799 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 9-375 |
| Cow position: | chr5:12133115-12132742 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 205 |
| Conread position: | 17-375 |
| Cow position: | chr5:57124021-57123662 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 18-373 |
| Cow position: | chr5:3966944-3966579 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 147 |
| Conread position: | 23-346 |
| Cow position: | chr5:28025187-28024868 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 193, 27 |
| Conread position: | 35-344 |
| Cow position: | chr5:49117853-49118174 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 0 |
| Conread position: | 38-346 |
| Cow position: | chr5:27490427-27490112 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 76 |
| Conread position: | 49-375 |
| Cow position: | chr5:6152416-6152750 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 304 |
| Conread position: | 63-349 |
| Cow position: | chr5:11632804-11633104 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 90-344 |
| Cow position: | chr5:47827888-47828158 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 92-374 |
| Cow position: | chr5:34525629-34525365 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 92-375 |
| Cow position: | chr5:58244389-58244679 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 72 |
| Conread position: | 105-337 |
| Cow position: | chr5:68593190-68592938 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 120-375 |
| Cow position: | chr5:23232696-23232441 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 120, 80 |
| Conread position: | 283-375 |
| Cow position: | chr5:24296835-24296745 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.