Cow genome map
| Conread name: | Pig4-TMW8022L20 |
| Conread position: | 1-347 |
| Cow position: | chrX:24444571-24444927 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 112 |
| Conread position: | 1-350 |
| Cow position: | chrX:23134097-23133740 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 176 |
| Conread position: | 1-351 |
| Cow position: | chrX:29891605-29891248 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 46 |
| Conread position: | 1-369 |
| Cow position: | chrX:14597355-14596980 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 351 |
| Conread position: | 1-371 |
| Cow position: | chrX:11146838-11147217 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 353 |
| Conread position: | 1-371 |
| Cow position: | chrX:29908918-29909303 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 322 |
| Conread position: | 1-373 |
| Cow position: | chrX:8481950-8481572 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 228 |
| Conread position: | 1-373 |
| Cow position: | chrX:21342894-21342531 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 46 |
| Conread position: | 1-373 |
| Cow position: | chrX:26442749-26443120 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 120 |
| Conread position: | 1-373 |
| Cow position: | chrX:27304441-27304069 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 164 |
| Conread position: | 1-375 |
| Cow position: | chrX:10867353-10867731 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 112 |
| Conread position: | 1-375 |
| Cow position: | chrX:11458310-11458686 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 1-375 |
| Cow position: | chrX:16781784-16781404 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 0 |
| Conread position: | 1-375 |
| Cow position: | chrX:21492668-21492283 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 355 |
| Conread position: | 1-375 |
| Cow position: | chrX:27497369-27497002 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 37 |
| Conread position: | 2-348 |
| Cow position: | chrX:5640378-5640736 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 2-373 |
| Cow position: | chrX:13406788-13407162 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 112 |
| Conread position: | 2-373 |
| Cow position: | chrX:15122664-15123040 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 324 |
| Conread position: | 2-373 |
| Cow position: | chrX:22810393-22810015 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 341 |
| Conread position: | 2-373 |
| Cow position: | chrX:22818572-22818195 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 145 |
| Conread position: | 2-373 |
| Cow position: | chrX:27978325-27978697 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 35 |
| Conread position: | 2-373 |
| Cow position: | chrX:30181427-30181808 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 353 |
| Conread position: | 2-375 |
| Cow position: | chrX:2480131-2480511 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 112 |
| Conread position: | 2-375 |
| Cow position: | chrX:4906499-4906876 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 39 |
| Conread position: | 2-375 |
| Cow position: | chrX:16702181-16701799 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 30 |
| Conread position: | 2-375 |
| Cow position: | chrX:18951233-18951597 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 2-375 |
| Cow position: | chrX:20725468-20725088 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 80 |
| Conread position: | 2-375 |
| Cow position: | chrX:21225978-21225595 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 353 |
| Conread position: | 2-375 |
| Cow position: | chrX:21414092-21413716 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 45 |
| Conread position: | 2-375 |
| Cow position: | chrX:23279524-23279145 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 78 |
| Conread position: | 2-375 |
| Cow position: | chrX:23388050-23388432 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 159 |
| Conread position: | 2-375 |
| Cow position: | chrX:23395104-23394723 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 158 |
| Conread position: | 2-375 |
| Cow position: | chrX:23573310-23573686 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 49 |
| Conread position: | 2-375 |
| Cow position: | chrX:30229614-30229993 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 227 |
| Conread position: | 3-354 |
| Cow position: | chrX:6236350-6236692 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 3-375 |
| Cow position: | chrX:27591524-27591899 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 150 |
| Conread position: | 6-350 |
| Cow position: | chrX:29098919-29098569 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 115 |
| Conread position: | 9-375 |
| Cow position: | chrX:9095137-9094764 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 343 |
| Conread position: | 11-367 |
| Cow position: | chrX:30072373-30072015 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 132 |
| Conread position: | 11-375 |
| Cow position: | chrX:7552317-7552691 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 343 |
| Conread position: | 27-371 |
| Cow position: | chrX:30013468-30013116 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 322 |
| Conread position: | 48-373 |
| Cow position: | chrX:21831968-21831632 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 308 |
| Conread position: | 68-375 |
| Cow position: | chrX:39561500-39561816 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 286 |
| Conread position: | 93-354 |
| Cow position: | chrX:20651854-20651578 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 129-354 |
| Cow position: | chrX:21628010-21628245 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 155, 84 |
| Conread position: | 166-372 |
| Cow position: | chrX:33828217-33828015 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 174-375 |
| Cow position: | chrX:6373873-6373671 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 82, 54 |
| Conread position: | 282-375 |
| Cow position: | chrX:31511819-31511723 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 283-373 |
| Cow position: | chrX:672997-673083 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.