Cow genome map
| Conread name: | Pig4-TMW8023I01 |
| Conread position: | 1-799 |
| Cow position: | chr11:9733493-9732678 (view UCSC Genome Browser custom track) |
| Alignm length: | 837 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 130 |
| Conread position: | 3-799 |
| Cow position: | chr11:15986441-15987250 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 55 |
| Conread position: | 3-799 |
| Cow position: | chr11:19062887-19062073 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 222 |
| Conread position: | 3-799 |
| Cow position: | chr11:20733045-20732225 (view UCSC Genome Browser custom track) |
| Alignm length: | 835 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 209 |
| Conread position: | 3-799 |
| Cow position: | chr11:47738350-47737544 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 72 |
| Conread position: | 31-797 |
| Cow position: | chr11:10957033-10957821 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 194 |
| Conread position: | 37-803 |
| Cow position: | chr11:47759058-47758263 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 118 |
| Conread position: | 38-511 |
| Cow position: | chr11:53285948-53285452 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 38-797 |
| Cow position: | chr11:50836443-50835662 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 187 |
| Conread position: | 38-799 |
| Cow position: | chr11:3494214-3494978 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 38-799 |
| Cow position: | chr11:17106457-17105685 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 224 |
| Conread position: | 38-799 |
| Cow position: | chr11:17547382-17548172 (view UCSC Genome Browser custom track) |
| Alignm length: | 809 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 38-799 |
| Cow position: | chr11:19101269-19100488 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 647 |
| Conread position: | 38-803 |
| Cow position: | chr11:23249245-23248466 (view UCSC Genome Browser custom track) |
| Alignm length: | 806 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 187 |
| Conread position: | 38-803 |
| Cow position: | chr11:31927376-31928173 (view UCSC Genome Browser custom track) |
| Alignm length: | 808 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 38-803 |
| Cow position: | chr11:53430811-53430024 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 623 |
| Conread position: | 38-803 |
| Cow position: | chr11:85392609-85391826 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 38-832 |
| Cow position: | chr11:11590192-11590990 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 137 |
| Conread position: | 38-832 |
| Cow position: | chr11:26123702-26122896 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 155 |
| Conread position: | 38-832 |
| Cow position: | chr11:29667373-29666563 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 648 |
| Conread position: | 38-832 |
| Cow position: | chr11:32079563-32078758 (view UCSC Genome Browser custom track) |
| Alignm length: | 835 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 38-832 |
| Cow position: | chr11:35894680-35893878 (view UCSC Genome Browser custom track) |
| Alignm length: | 830 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 216 |
| Conread position: | 38-832 |
| Cow position: | chr11:41169471-41168673 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 203 |
| Conread position: | 55-832 |
| Cow position: | chr11:4268936-4268120 (view UCSC Genome Browser custom track) |
| Alignm length: | 830 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 629 |
| Conread position: | 61-799 |
| Cow position: | chr11:4034148-4033398 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 137 |
| Conread position: | 75-777 |
| Cow position: | chr11:40774752-40774040 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 97 |
| Conread position: | 94-803 |
| Cow position: | chr11:12318745-12318008 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 129 |
| Conread position: | 101-832 |
| Cow position: | chr11:44253362-44254106 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 159 |
| Conread position: | 118-803 |
| Cow position: | chr11:42371118-42371818 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 394 |
| Conread position: | 119-799 |
| Cow position: | chr11:32479512-32478810 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 99 |
| Conread position: | 167-803 |
| Cow position: | chr11:22725005-22725636 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 419 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 30, 41 |
| Conread position: | 196-803 |
| Cow position: | chr11:54483099-54482512 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 234-803 |
| Cow position: | chr11:8264949-8265519 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 136 |
| Conread position: | 242-795 |
| Cow position: | chr11:27726478-27725903 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 460 |
| Conread position: | 244-832 |
| Cow position: | chr11:42364189-42364726 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 274-803 |
| Cow position: | chr11:66861010-66860478 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 279-799 |
| Cow position: | chr11:32453542-32454055 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 368 |
| Conread position: | 297-826 |
| Cow position: | chr11:24483284-24482778 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 350 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 11, 65 |
| Conread position: | 306-799 |
| Cow position: | chr11:4885457-4884961 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 340 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 219, 56 |
| Conread position: | 307-799 |
| Cow position: | chr11:419215-418727 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 343 |
| Conread position: | 307-803 |
| Cow position: | chr11:58137928-58138421 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 355 |
| Conread position: | 311-803 |
| Cow position: | chr11:33603114-33602632 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 27 |
| Conread position: | 338-799 |
| Cow position: | chr11:52421012-52421466 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 304 |
| Conread position: | 342-803 |
| Cow position: | chr11:7720836-7720384 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 22 |
| Conread position: | 368-783 |
| Cow position: | chr11:27888437-27888836 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 150, 173 |
| Conread position: | 370-799 |
| Cow position: | chr11:63391904-63391482 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 277 |
| Conread position: | 417-775 |
| Cow position: | chr11:37288397-37288756 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 44 |
| Conread position: | 417-803 |
| Cow position: | chr11:9155556-9155180 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 230 |
| Conread position: | 439-799 |
| Cow position: | chr11:67446599-67446246 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 202 |
| Conread position: | 439-799 |
| Cow position: | chr11:67452293-67452648 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 232 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 86, 162 |
| Conread position: | 443-803 |
| Cow position: | chr11:5482871-5483226 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 213 |
| Conread position: | 453-799 |
| Cow position: | chr11:84965772-84966111 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 71, 194 |
| Conread position: | 468-799 |
| Cow position: | chr11:30202015-30201691 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 57, 179 |
| Conread position: | 488-775 |
| Cow position: | chr11:46766647-46766935 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 106 |
| Conread position: | 500-797 |
| Cow position: | chr11:75391954-75392244 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 24, 147 |
| Conread position: | 506-832 |
| Cow position: | chr11:44155369-44155054 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 99 |
| Conread position: | 525-803 |
| Cow position: | chr11:32285194-32284908 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 57 |
| Conread position: | 546-799 |
| Cow position: | chr11:2349696-2349946 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 124 |
| Conread position: | 594-797 |
| Cow position: | chr11:78792262-78792073 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 136, 46 |
| Conread position: | 620-832 |
| Cow position: | chr11:52845355-52845566 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 670-832 |
| Cow position: | chr11:44581361-44581206 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 677-799 |
| Cow position: | chr11:38601055-38600938 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
Show alignments to all cow chromosomes.