Cow genome map
| Conread name: | Pig4-TMW8023I01 |
| Conread position: | 1-339 |
| Cow position: | chr13:3534634-3534277 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 70, 339 |
| Conread position: | 3-173 |
| Cow position: | chr13:23405451-23405276 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-632 |
| Cow position: | chr13:11739171-11739835 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 125 |
| Conread position: | 3-799 |
| Cow position: | chr13:13326184-13327012 (view UCSC Genome Browser custom track) |
| Alignm length: | 843 |
| Alignm identity: | 587 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 52 |
| Conread position: | 3-799 |
| Cow position: | chr13:21838950-21838144 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 207 |
| Conread position: | 3-799 |
| Cow position: | chr13:33524699-33523887 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 222 |
| Conread position: | 8-644 |
| Cow position: | chr13:21602972-21603640 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 33-796 |
| Cow position: | chr13:16816375-16817144 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 112 |
| Conread position: | 37-803 |
| Cow position: | chr13:13901159-13901940 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 6 |
| Conread position: | 38-768 |
| Cow position: | chr13:35758573-35759318 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 174 |
| Conread position: | 38-801 |
| Cow position: | chr13:42090401-42089616 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 363 |
| Conread position: | 38-803 |
| Cow position: | chr13:16253224-16252443 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 169 |
| Conread position: | 38-803 |
| Cow position: | chr13:30304489-30305270 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 331 |
| Conread position: | 38-803 |
| Cow position: | chr13:32735900-32735111 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 38-811 |
| Cow position: | chr13:6666847-6666055 (view UCSC Genome Browser custom track) |
| Alignm length: | 812 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 38-811 |
| Cow position: | chr13:31508199-31508993 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 38-811 |
| Cow position: | chr13:34869264-34870045 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 266 |
| Conread position: | 38-832 |
| Cow position: | chr13:14401816-14401001 (view UCSC Genome Browser custom track) |
| Alignm length: | 839 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 638 |
| Conread position: | 38-832 |
| Cow position: | chr13:34041042-34040246 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 357 |
| Conread position: | 38-832 |
| Cow position: | chr13:34343198-34344010 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 43-633 |
| Cow position: | chr13:6640688-6641287 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 106 |
| Conread position: | 44-803 |
| Cow position: | chr13:4942683-4943461 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 181 |
| Conread position: | 45-803 |
| Cow position: | chr13:31729603-31728823 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 49 |
| Conread position: | 52-832 |
| Cow position: | chr13:11763327-11762538 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 254 |
| Conread position: | 136-799 |
| Cow position: | chr13:11388598-11389276 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 88 |
| Conread position: | 183-633 |
| Cow position: | chr13:1634538-1635003 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 276 |
| Conread position: | 230-801 |
| Cow position: | chr13:54239944-54239354 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 461 |
| Conread position: | 232-832 |
| Cow position: | chr13:15922959-15922358 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 438 |
| Conread position: | 234-803 |
| Cow position: | chr13:12566945-12566388 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 391 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 42, 110 |
| Conread position: | 235-783 |
| Cow position: | chr13:15884565-15884013 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 228 |
| Conread position: | 243-803 |
| Cow position: | chr13:18331598-18331033 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 429 |
| Conread position: | 261-797 |
| Cow position: | chr13:49614002-49613466 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 387 |
| Conread position: | 274-797 |
| Cow position: | chr13:16921005-16921528 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 380 |
| Conread position: | 274-799 |
| Cow position: | chr13:23454982-23455508 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 381 |
| Conread position: | 274-809 |
| Cow position: | chr13:15558887-15559417 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 317 |
| Conread position: | 280-799 |
| Cow position: | chr13:679337-679849 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 367 |
| Conread position: | 300-803 |
| Cow position: | chr13:19636725-19637224 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 137 |
| Conread position: | 300-832 |
| Cow position: | chr13:3652679-3652163 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 253 |
| Conread position: | 306-800 |
| Cow position: | chr13:28343523-28343046 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 78 |
| Conread position: | 307-832 |
| Cow position: | chr13:15280205-15279693 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 349 |
| Conread position: | 317-799 |
| Cow position: | chr13:17310013-17310488 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 330 |
| Conread position: | 350-803 |
| Cow position: | chr13:10373691-10374147 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 123 |
| Conread position: | 354-803 |
| Cow position: | chr13:20573460-20573016 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 308 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 176, 274 |
| Conread position: | 368-799 |
| Cow position: | chr13:562741-562318 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 10 |
| Conread position: | 374-811 |
| Cow position: | chr13:30470712-30470281 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 283 |
| Conread position: | 395-799 |
| Cow position: | chr13:35538836-35539234 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 7 |
| Conread position: | 413-804 |
| Cow position: | chr13:7049341-7049726 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 19 |
| Conread position: | 417-832 |
| Cow position: | chr13:21400532-21400940 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 148, 219 |
| Conread position: | 449-803 |
| Cow position: | chr13:49194989-49194640 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 197 |
| Conread position: | 467-803 |
| Cow position: | chr13:4735026-4735351 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 476-797 |
| Cow position: | chr13:21698032-21698346 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 171 |
| Conread position: | 486-811 |
| Cow position: | chr13:41338883-41338567 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 39, 139 |
| Conread position: | 488-803 |
| Cow position: | chr13:32548525-32548833 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 169 |
| Conread position: | 525-797 |
| Cow position: | chr13:8069347-8069086 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 45, 107 |
| Conread position: | 540-811 |
| Cow position: | chr13:3313457-3313719 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 100 |
| Conread position: | 549-799 |
| Cow position: | chr13:60647764-60647510 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 23, 134 |
| Conread position: | 552-803 |
| Cow position: | chr13:4733370-4733607 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 630-811 |
| Cow position: | chr13:30653380-30653201 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 48 |
Show alignments to all cow chromosomes.