Cow genome map
Conread name: | Pig4-TMW8023I01 |
Conread position: | 2-779 |
Cow position: | chr15:41956946-41957743 (view UCSC Genome Browser custom track) |
Alignm length: | 823 |
Alignm identity: | 522 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 119 |
Conread position: | 3-173 |
Cow position: | chr15:21803870-21804041 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 119 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 3-351 |
Cow position: | chr15:46553517-46553145 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 252 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 68, 82 |
Conread position: | 3-799 |
Cow position: | chr15:2646519-2645703 (view UCSC Genome Browser custom track) |
Alignm length: | 838 |
Alignm identity: | 579 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 65 |
Conread position: | 3-799 |
Cow position: | chr15:7564127-7564947 (view UCSC Genome Browser custom track) |
Alignm length: | 834 |
Alignm identity: | 577 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 613 |
Conread position: | 6-195 |
Cow position: | chr15:21945335-21945144 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 144 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 66, 92 |
Conread position: | 33-802 |
Cow position: | chr15:25205846-25205059 (view UCSC Genome Browser custom track) |
Alignm length: | 809 |
Alignm identity: | 570 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 177 |
Conread position: | 38-799 |
Cow position: | chr15:18266610-18265816 (view UCSC Genome Browser custom track) |
Alignm length: | 813 |
Alignm identity: | 544 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 197 |
Conread position: | 38-803 |
Cow position: | chr15:4726367-4727155 (view UCSC Genome Browser custom track) |
Alignm length: | 804 |
Alignm identity: | 553 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 187 |
Conread position: | 38-803 |
Cow position: | chr15:8100626-8101402 (view UCSC Genome Browser custom track) |
Alignm length: | 788 |
Alignm identity: | 541 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 143 |
Conread position: | 38-803 |
Cow position: | chr15:15345943-15345157 (view UCSC Genome Browser custom track) |
Alignm length: | 805 |
Alignm identity: | 551 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 187 |
Conread position: | 38-803 |
Cow position: | chr15:19736890-19736095 (view UCSC Genome Browser custom track) |
Alignm length: | 816 |
Alignm identity: | 553 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 17 |
Conread position: | 38-813 |
Cow position: | chr15:6154761-6153972 (view UCSC Genome Browser custom track) |
Alignm length: | 812 |
Alignm identity: | 553 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 187 |
Conread position: | 38-832 |
Cow position: | chr15:4386922-4387726 (view UCSC Genome Browser custom track) |
Alignm length: | 834 |
Alignm identity: | 576 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 187 |
Conread position: | 38-832 |
Cow position: | chr15:20411763-20412570 (view UCSC Genome Browser custom track) |
Alignm length: | 831 |
Alignm identity: | 567 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 33 |
Conread position: | 39-803 |
Cow position: | chr15:35736962-35737745 (view UCSC Genome Browser custom track) |
Alignm length: | 803 |
Alignm identity: | 546 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 359 |
Conread position: | 44-765 |
Cow position: | chr15:17294226-17294955 (view UCSC Genome Browser custom track) |
Alignm length: | 754 |
Alignm identity: | 509 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 79 |
Conread position: | 44-799 |
Cow position: | chr15:5010460-5009691 (view UCSC Genome Browser custom track) |
Alignm length: | 794 |
Alignm identity: | 553 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 506 |
Conread position: | 44-799 |
Cow position: | chr15:6382990-6382205 (view UCSC Genome Browser custom track) |
Alignm length: | 796 |
Alignm identity: | 541 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 181 |
Conread position: | 44-803 |
Cow position: | chr15:18577884-18578659 (view UCSC Genome Browser custom track) |
Alignm length: | 797 |
Alignm identity: | 545 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 40 |
Conread position: | 45-799 |
Cow position: | chr15:33122550-33123325 (view UCSC Genome Browser custom track) |
Alignm length: | 795 |
Alignm identity: | 562 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 165 |
Conread position: | 45-803 |
Cow position: | chr15:2901088-2900304 (view UCSC Genome Browser custom track) |
Alignm length: | 803 |
Alignm identity: | 535 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 180 |
Conread position: | 45-803 |
Cow position: | chr15:21450859-21451635 (view UCSC Genome Browser custom track) |
Alignm length: | 794 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 30 |
Conread position: | 52-597 |
Cow position: | chr15:36668883-36669432 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 358 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 22, 268 |
Conread position: | 56-832 |
Cow position: | chr15:6552598-6551791 (view UCSC Genome Browser custom track) |
Alignm length: | 832 |
Alignm identity: | 545 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 39 |
Conread position: | 61-554 |
Cow position: | chr15:35844193-35844702 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 351 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 14, 71 |
Conread position: | 70-799 |
Cow position: | chr15:4081037-4080280 (view UCSC Genome Browser custom track) |
Alignm length: | 768 |
Alignm identity: | 551 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 139 |
Conread position: | 73-803 |
Cow position: | chr15:6626757-6627511 (view UCSC Genome Browser custom track) |
Alignm length: | 781 |
Alignm identity: | 498 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 73, 381 |
Conread position: | 75-799 |
Cow position: | chr15:1783534-1784278 (view UCSC Genome Browser custom track) |
Alignm length: | 765 |
Alignm identity: | 531 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 149 |
Conread position: | 93-797 |
Cow position: | chr15:37459119-37459827 (view UCSC Genome Browser custom track) |
Alignm length: | 735 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 91 |
Conread position: | 102-800 |
Cow position: | chr15:42687-43400 (view UCSC Genome Browser custom track) |
Alignm length: | 732 |
Alignm identity: | 473 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 42 |
Conread position: | 103-803 |
Cow position: | chr15:9431169-9431882 (view UCSC Genome Browser custom track) |
Alignm length: | 735 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 88 |
Conread position: | 125-800 |
Cow position: | chr15:39448282-39447611 (view UCSC Genome Browser custom track) |
Alignm length: | 709 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 86 |
Conread position: | 230-803 |
Cow position: | chr15:12419336-12418760 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 156 |
Conread position: | 230-832 |
Cow position: | chr15:24041642-24042232 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 10 |
Conread position: | 231-797 |
Cow position: | chr15:16190400-16189828 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 429 |
Conread position: | 231-799 |
Cow position: | chr15:50148703-50149265 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 355 |
Conread position: | 231-809 |
Cow position: | chr15:4947876-4948461 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 135 |
Conread position: | 232-803 |
Cow position: | chr15:41787309-41786734 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 86 |
Conread position: | 274-799 |
Cow position: | chr15:4198181-4198708 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 391 |
Conread position: | 274-799 |
Cow position: | chr15:42938213-42938734 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 166 |
Conread position: | 274-829 |
Cow position: | chr15:6614439-6614992 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 363 |
Conread position: | 307-803 |
Cow position: | chr15:51219206-51219689 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 249, 223 |
Conread position: | 307-832 |
Cow position: | chr15:24296652-24297165 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 350 |
Conread position: | 344-799 |
Cow position: | chr15:48007901-48008353 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 27 |
Conread position: | 349-803 |
Cow position: | chr15:13429323-13429771 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 294 |
Conread position: | 380-799 |
Cow position: | chr15:480104-480526 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 286 |
Conread position: | 380-803 |
Cow position: | chr15:20406225-20405788 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 314 |
Conread position: | 386-803 |
Cow position: | chr15:5496591-5497009 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 258 |
Conread position: | 388-803 |
Cow position: | chr15:610698-610295 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 36 |
Conread position: | 422-751 |
Cow position: | chr15:18215575-18215900 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 232 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 31, 222 |
Conread position: | 423-803 |
Cow position: | chr15:25489853-25490220 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 265 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 133, 9 |
Conread position: | 517-803 |
Cow position: | chr15:7270014-7270293 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 211 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 7, 110 |
Conread position: | 519-799 |
Cow position: | chr15:18228736-18229008 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 216 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 8, 114 |
Conread position: | 522-809 |
Cow position: | chr15:5939986-5939705 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 221 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 34, 117 |
Conread position: | 531-783 |
Cow position: | chr15:280855-280614 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 183 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 29, 121 |
Conread position: | 551-799 |
Cow position: | chr15:6562880-6563121 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 186 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 104, 84 |
Conread position: | 557-811 |
Cow position: | chr15:13679123-13679359 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 182 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 24, 17 |
Conread position: | 564-802 |
Cow position: | chr15:7840023-7840249 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 169 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 163, 20 |
Conread position: | 593-799 |
Cow position: | chr15:6480509-6480705 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 147 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 123, 43 |
Conread position: | 642-799 |
Cow position: | chr15:31586608-31586453 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 125 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 13, 36 |
Conread position: | 654-832 |
Cow position: | chr15:10825274-10825444 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 138 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 76, 23 |
Conread position: | 658-799 |
Cow position: | chr15:51767584-51767446 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 75, 19 |
Show alignments to all cow chromosomes.