Cow genome map

Conread name: Pig4-TMW8023I01

Conread position: 2-779
Cow position: chr15:41956946-41957743 (view UCSC Genome Browser custom track)
Alignm length: 823
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 119

Conread position: 3-173
Cow position: chr15:21803870-21804041 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 143, 0

Conread position: 3-351
Cow position: chr15:46553517-46553145 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 68, 82

Conread position: 3-799
Cow position: chr15:2646519-2645703 (view UCSC Genome Browser custom track)
Alignm length: 838
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 65

Conread position: 3-799
Cow position: chr15:7564127-7564947 (view UCSC Genome Browser custom track)
Alignm length: 834
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 613

Conread position: 6-195
Cow position: chr15:21945335-21945144 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 92

Conread position: 33-802
Cow position: chr15:25205846-25205059 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 177

Conread position: 38-799
Cow position: chr15:18266610-18265816 (view UCSC Genome Browser custom track)
Alignm length: 813
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 197

Conread position: 38-803
Cow position: chr15:4726367-4727155 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 187

Conread position: 38-803
Cow position: chr15:8100626-8101402 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 143

Conread position: 38-803
Cow position: chr15:15345943-15345157 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 187

Conread position: 38-803
Cow position: chr15:19736890-19736095 (view UCSC Genome Browser custom track)
Alignm length: 816
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 17

Conread position: 38-813
Cow position: chr15:6154761-6153972 (view UCSC Genome Browser custom track)
Alignm length: 812
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 187

Conread position: 38-832
Cow position: chr15:4386922-4387726 (view UCSC Genome Browser custom track)
Alignm length: 834
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 187

Conread position: 38-832
Cow position: chr15:20411763-20412570 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 33

Conread position: 39-803
Cow position: chr15:35736962-35737745 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 359

Conread position: 44-765
Cow position: chr15:17294226-17294955 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 79

Conread position: 44-799
Cow position: chr15:5010460-5009691 (view UCSC Genome Browser custom track)
Alignm length: 794
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 506

Conread position: 44-799
Cow position: chr15:6382990-6382205 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 181

Conread position: 44-803
Cow position: chr15:18577884-18578659 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 40

Conread position: 45-799
Cow position: chr15:33122550-33123325 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 165

Conread position: 45-803
Cow position: chr15:2901088-2900304 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 180

Conread position: 45-803
Cow position: chr15:21450859-21451635 (view UCSC Genome Browser custom track)
Alignm length: 794
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 30

Conread position: 52-597
Cow position: chr15:36668883-36669432 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 358
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 22, 268

Conread position: 56-832
Cow position: chr15:6552598-6551791 (view UCSC Genome Browser custom track)
Alignm length: 832
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 39

Conread position: 61-554
Cow position: chr15:35844193-35844702 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 351
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 14, 71

Conread position: 70-799
Cow position: chr15:4081037-4080280 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 139

Conread position: 73-803
Cow position: chr15:6626757-6627511 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 498
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 73, 381

Conread position: 75-799
Cow position: chr15:1783534-1784278 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 149

Conread position: 93-797
Cow position: chr15:37459119-37459827 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 91

Conread position: 102-800
Cow position: chr15:42687-43400 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 42

Conread position: 103-803
Cow position: chr15:9431169-9431882 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 88

Conread position: 125-800
Cow position: chr15:39448282-39447611 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 86

Conread position: 230-803
Cow position: chr15:12419336-12418760 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 156

Conread position: 230-832
Cow position: chr15:24041642-24042232 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 10

Conread position: 231-797
Cow position: chr15:16190400-16189828 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 429

Conread position: 231-799
Cow position: chr15:50148703-50149265 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 355

Conread position: 231-809
Cow position: chr15:4947876-4948461 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 135

Conread position: 232-803
Cow position: chr15:41787309-41786734 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 86

Conread position: 274-799
Cow position: chr15:4198181-4198708 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 391

Conread position: 274-799
Cow position: chr15:42938213-42938734 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 166

Conread position: 274-829
Cow position: chr15:6614439-6614992 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 363

Conread position: 307-803
Cow position: chr15:51219206-51219689 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 223

Conread position: 307-832
Cow position: chr15:24296652-24297165 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 350

Conread position: 344-799
Cow position: chr15:48007901-48008353 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 27

Conread position: 349-803
Cow position: chr15:13429323-13429771 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 294

Conread position: 380-799
Cow position: chr15:480104-480526 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 286

Conread position: 380-803
Cow position: chr15:20406225-20405788 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 314

Conread position: 386-803
Cow position: chr15:5496591-5497009 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 258

Conread position: 388-803
Cow position: chr15:610698-610295 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 36

Conread position: 422-751
Cow position: chr15:18215575-18215900 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 232
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 222

Conread position: 423-803
Cow position: chr15:25489853-25490220 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 133, 9

Conread position: 517-803
Cow position: chr15:7270014-7270293 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 7, 110

Conread position: 519-799
Cow position: chr15:18228736-18229008 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 8, 114

Conread position: 522-809
Cow position: chr15:5939986-5939705 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 34, 117

Conread position: 531-783
Cow position: chr15:280855-280614 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 121

Conread position: 551-799
Cow position: chr15:6562880-6563121 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 104, 84

Conread position: 557-811
Cow position: chr15:13679123-13679359 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 17

Conread position: 564-802
Cow position: chr15:7840023-7840249 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 163, 20

Conread position: 593-799
Cow position: chr15:6480509-6480705 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 43

Conread position: 642-799
Cow position: chr15:31586608-31586453 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 13, 36

Conread position: 654-832
Cow position: chr15:10825274-10825444 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 23

Conread position: 658-799
Cow position: chr15:51767584-51767446 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 19

Show alignments to all cow chromosomes.