Cow genome map
Conread name: | Pig4-TMW8023I01 |
Conread position: | 3-633 |
Cow position: | chr16:9209723-9210372 (view UCSC Genome Browser custom track) |
Alignm length: | 665 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 81 |
Conread position: | 8-799 |
Cow position: | chr16:33321-34140 (view UCSC Genome Browser custom track) |
Alignm length: | 836 |
Alignm identity: | 573 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 27 |
Conread position: | 38-633 |
Cow position: | chr16:338009-338619 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 41 |
Conread position: | 38-799 |
Cow position: | chr16:2482312-2481545 (view UCSC Genome Browser custom track) |
Alignm length: | 791 |
Alignm identity: | 543 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 57 |
Conread position: | 38-799 |
Cow position: | chr16:28169499-28168723 (view UCSC Genome Browser custom track) |
Alignm length: | 799 |
Alignm identity: | 547 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 172 |
Conread position: | 38-802 |
Cow position: | chr16:8815282-8814506 (view UCSC Genome Browser custom track) |
Alignm length: | 803 |
Alignm identity: | 552 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 74 |
Conread position: | 38-803 |
Cow position: | chr16:2237943-2237169 (view UCSC Genome Browser custom track) |
Alignm length: | 795 |
Alignm identity: | 538 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 26 |
Conread position: | 38-803 |
Cow position: | chr16:2726390-2725620 (view UCSC Genome Browser custom track) |
Alignm length: | 803 |
Alignm identity: | 534 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 33 |
Conread position: | 38-803 |
Cow position: | chr16:7675630-7674860 (view UCSC Genome Browser custom track) |
Alignm length: | 799 |
Alignm identity: | 550 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 21 |
Conread position: | 38-803 |
Cow position: | chr16:15185902-15186671 (view UCSC Genome Browser custom track) |
Alignm length: | 796 |
Alignm identity: | 539 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 174 |
Conread position: | 38-803 |
Cow position: | chr16:25442452-25443232 (view UCSC Genome Browser custom track) |
Alignm length: | 802 |
Alignm identity: | 551 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 351 |
Conread position: | 38-803 |
Cow position: | chr16:27732559-27731780 (view UCSC Genome Browser custom track) |
Alignm length: | 802 |
Alignm identity: | 524 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 187 |
Conread position: | 38-832 |
Cow position: | chr16:10439081-10439874 (view UCSC Genome Browser custom track) |
Alignm length: | 823 |
Alignm identity: | 546 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 187 |
Conread position: | 38-832 |
Cow position: | chr16:12537125-12536323 (view UCSC Genome Browser custom track) |
Alignm length: | 831 |
Alignm identity: | 574 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 109 |
Conread position: | 38-832 |
Cow position: | chr16:23984123-23984933 (view UCSC Genome Browser custom track) |
Alignm length: | 836 |
Alignm identity: | 572 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 99 |
Conread position: | 38-832 |
Cow position: | chr16:29047845-29048653 (view UCSC Genome Browser custom track) |
Alignm length: | 832 |
Alignm identity: | 574 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 187 |
Conread position: | 38-832 |
Cow position: | chr16:40295338-40294539 (view UCSC Genome Browser custom track) |
Alignm length: | 828 |
Alignm identity: | 549 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 33 |
Conread position: | 38-832 |
Cow position: | chr16:43896439-43895637 (view UCSC Genome Browser custom track) |
Alignm length: | 831 |
Alignm identity: | 571 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 187 |
Conread position: | 44-803 |
Cow position: | chr16:1433016-1433790 (view UCSC Genome Browser custom track) |
Alignm length: | 802 |
Alignm identity: | 536 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 155 |
Conread position: | 44-832 |
Cow position: | chr16:15568086-15568881 (view UCSC Genome Browser custom track) |
Alignm length: | 823 |
Alignm identity: | 555 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 181 |
Conread position: | 49-799 |
Cow position: | chr16:20193338-20192571 (view UCSC Genome Browser custom track) |
Alignm length: | 790 |
Alignm identity: | 546 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 176 |
Conread position: | 54-803 |
Cow position: | chr16:43846375-43845617 (view UCSC Genome Browser custom track) |
Alignm length: | 781 |
Alignm identity: | 547 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 21 |
Conread position: | 75-806 |
Cow position: | chr16:51590612-51589853 (view UCSC Genome Browser custom track) |
Alignm length: | 778 |
Alignm identity: | 468 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 76, 9 |
Conread position: | 93-803 |
Cow position: | chr16:7465484-7466212 (view UCSC Genome Browser custom track) |
Alignm length: | 749 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 85 |
Conread position: | 93-803 |
Cow position: | chr16:23251091-23250377 (view UCSC Genome Browser custom track) |
Alignm length: | 736 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 118 |
Conread position: | 103-797 |
Cow position: | chr16:4848017-4847318 (view UCSC Genome Browser custom track) |
Alignm length: | 737 |
Alignm identity: | 489 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 16 |
Conread position: | 109-809 |
Cow position: | chr16:26664620-26665338 (view UCSC Genome Browser custom track) |
Alignm length: | 736 |
Alignm identity: | 510 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 574 |
Conread position: | 136-803 |
Cow position: | chr16:29208296-29207619 (view UCSC Genome Browser custom track) |
Alignm length: | 696 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 100 |
Conread position: | 230-803 |
Cow position: | chr16:52525257-52525833 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 413 |
Conread position: | 230-811 |
Cow position: | chr16:22800645-22800062 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 147 |
Conread position: | 230-832 |
Cow position: | chr16:16537829-16538435 (view UCSC Genome Browser custom track) |
Alignm length: | 624 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 160 |
Conread position: | 231-645 |
Cow position: | chr16:28436099-28435668 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 295 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 22, 161 |
Conread position: | 235-803 |
Cow position: | chr16:20200159-20200731 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 269 |
Conread position: | 265-803 |
Cow position: | chr16:3770947-3770410 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 5 |
Conread position: | 274-799 |
Cow position: | chr16:28195228-28194705 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 106 |
Conread position: | 306-803 |
Cow position: | chr16:4799589-4799117 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 20 |
Conread position: | 307-799 |
Cow position: | chr16:6944391-6944873 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 66 |
Conread position: | 307-803 |
Cow position: | chr16:5486878-5487368 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 50 |
Conread position: | 307-803 |
Cow position: | chr16:29035017-29035499 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 147 |
Conread position: | 307-832 |
Cow position: | chr16:41165641-41165129 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 37 |
Conread position: | 311-811 |
Cow position: | chr16:49744323-49743819 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 335 |
Conread position: | 326-807 |
Cow position: | chr16:22839422-22839895 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 325 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 35, 113 |
Conread position: | 331-803 |
Cow position: | chr16:31587568-31587097 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 22 |
Conread position: | 345-803 |
Cow position: | chr16:56915966-56915506 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 116 |
Conread position: | 346-832 |
Cow position: | chr16:42161900-42162371 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 184 |
Conread position: | 362-803 |
Cow position: | chr16:46103535-46103105 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 267 |
Conread position: | 368-799 |
Cow position: | chr16:18974307-18974726 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 117 |
Conread position: | 374-832 |
Cow position: | chr16:2409711-2409265 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 283 |
Conread position: | 386-803 |
Cow position: | chr16:838478-838888 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 271 |
Conread position: | 386-832 |
Cow position: | chr16:27711957-27711523 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 299 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 139, 42 |
Conread position: | 389-799 |
Cow position: | chr16:11284419-11284819 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 81 |
Conread position: | 412-799 |
Cow position: | chr16:48136059-48135688 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 5 |
Conread position: | 428-815 |
Cow position: | chr16:18762172-18762560 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 272 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 192, 15 |
Conread position: | 443-832 |
Cow position: | chr16:15981136-15980759 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 280 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 82, 214 |
Conread position: | 444-802 |
Cow position: | chr16:51086021-51086384 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 195 |
Conread position: | 460-802 |
Cow position: | chr16:41626076-41626410 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 245 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 67, 182 |
Conread position: | 476-782 |
Cow position: | chr16:46629531-46629828 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 216 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 49, 127 |
Conread position: | 500-797 |
Cow position: | chr16:2891209-2890919 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 228 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 24, 147 |
Conread position: | 525-799 |
Cow position: | chr16:26651950-26652214 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 200 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 31, 98 |
Conread position: | 533-799 |
Cow position: | chr16:47402724-47402981 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 203 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 31, 122 |
Conread position: | 557-797 |
Cow position: | chr16:47787326-47787551 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 183 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 173, 7 |
Conread position: | 571-797 |
Cow position: | chr16:23877142-23876931 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 176 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 159, 54 |
Conread position: | 579-832 |
Cow position: | chr16:3145001-3144766 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 185 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 154, 69 |
Conread position: | 644-800 |
Cow position: | chr16:37806935-37807088 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 14, 29 |
Conread position: | 660-803 |
Cow position: | chr16:1566209-1566069 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 73, 12 |
Conread position: | 660-832 |
Cow position: | chr16:14663843-14663679 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 132 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 73, 12 |
Show alignments to all cow chromosomes.