Cow genome map

Conread name: Pig4-TMW8023I01

Conread position: 3-633
Cow position: chr16:9209723-9210372 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 81

Conread position: 8-799
Cow position: chr16:33321-34140 (view UCSC Genome Browser custom track)
Alignm length: 836
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 27

Conread position: 38-633
Cow position: chr16:338009-338619 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 41

Conread position: 38-799
Cow position: chr16:2482312-2481545 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 57

Conread position: 38-799
Cow position: chr16:28169499-28168723 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 172

Conread position: 38-802
Cow position: chr16:8815282-8814506 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 74

Conread position: 38-803
Cow position: chr16:2237943-2237169 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 26

Conread position: 38-803
Cow position: chr16:2726390-2725620 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 33

Conread position: 38-803
Cow position: chr16:7675630-7674860 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 21

Conread position: 38-803
Cow position: chr16:15185902-15186671 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 174

Conread position: 38-803
Cow position: chr16:25442452-25443232 (view UCSC Genome Browser custom track)
Alignm length: 802
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 351

Conread position: 38-803
Cow position: chr16:27732559-27731780 (view UCSC Genome Browser custom track)
Alignm length: 802
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 187

Conread position: 38-832
Cow position: chr16:10439081-10439874 (view UCSC Genome Browser custom track)
Alignm length: 823
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 187

Conread position: 38-832
Cow position: chr16:12537125-12536323 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 109

Conread position: 38-832
Cow position: chr16:23984123-23984933 (view UCSC Genome Browser custom track)
Alignm length: 836
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 99

Conread position: 38-832
Cow position: chr16:29047845-29048653 (view UCSC Genome Browser custom track)
Alignm length: 832
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 187

Conread position: 38-832
Cow position: chr16:40295338-40294539 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 33

Conread position: 38-832
Cow position: chr16:43896439-43895637 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 187

Conread position: 44-803
Cow position: chr16:1433016-1433790 (view UCSC Genome Browser custom track)
Alignm length: 802
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 155

Conread position: 44-832
Cow position: chr16:15568086-15568881 (view UCSC Genome Browser custom track)
Alignm length: 823
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 181

Conread position: 49-799
Cow position: chr16:20193338-20192571 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 176

Conread position: 54-803
Cow position: chr16:43846375-43845617 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 21

Conread position: 75-806
Cow position: chr16:51590612-51589853 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 468
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 76, 9

Conread position: 93-803
Cow position: chr16:7465484-7466212 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 85

Conread position: 93-803
Cow position: chr16:23251091-23250377 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 118

Conread position: 103-797
Cow position: chr16:4848017-4847318 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 16

Conread position: 109-809
Cow position: chr16:26664620-26665338 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 574

Conread position: 136-803
Cow position: chr16:29208296-29207619 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 100

Conread position: 230-803
Cow position: chr16:52525257-52525833 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 413

Conread position: 230-811
Cow position: chr16:22800645-22800062 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 147

Conread position: 230-832
Cow position: chr16:16537829-16538435 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 160

Conread position: 231-645
Cow position: chr16:28436099-28435668 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 161

Conread position: 235-803
Cow position: chr16:20200159-20200731 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 269

Conread position: 265-803
Cow position: chr16:3770947-3770410 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 5

Conread position: 274-799
Cow position: chr16:28195228-28194705 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 106

Conread position: 306-803
Cow position: chr16:4799589-4799117 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 20

Conread position: 307-799
Cow position: chr16:6944391-6944873 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 66

Conread position: 307-803
Cow position: chr16:5486878-5487368 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 50

Conread position: 307-803
Cow position: chr16:29035017-29035499 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 147

Conread position: 307-832
Cow position: chr16:41165641-41165129 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 37

Conread position: 311-811
Cow position: chr16:49744323-49743819 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 335

Conread position: 326-807
Cow position: chr16:22839422-22839895 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 325
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 113

Conread position: 331-803
Cow position: chr16:31587568-31587097 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 345-803
Cow position: chr16:56915966-56915506 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 116

Conread position: 346-832
Cow position: chr16:42161900-42162371 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 184

Conread position: 362-803
Cow position: chr16:46103535-46103105 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 267

Conread position: 368-799
Cow position: chr16:18974307-18974726 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 117

Conread position: 374-832
Cow position: chr16:2409711-2409265 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 283

Conread position: 386-803
Cow position: chr16:838478-838888 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 271

Conread position: 386-832
Cow position: chr16:27711957-27711523 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 299
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 139, 42

Conread position: 389-799
Cow position: chr16:11284419-11284819 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 81

Conread position: 412-799
Cow position: chr16:48136059-48135688 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 5

Conread position: 428-815
Cow position: chr16:18762172-18762560 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 272
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 192, 15

Conread position: 443-832
Cow position: chr16:15981136-15980759 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 214

Conread position: 444-802
Cow position: chr16:51086021-51086384 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 195

Conread position: 460-802
Cow position: chr16:41626076-41626410 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 67, 182

Conread position: 476-782
Cow position: chr16:46629531-46629828 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 127

Conread position: 500-797
Cow position: chr16:2891209-2890919 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 24, 147

Conread position: 525-799
Cow position: chr16:26651950-26652214 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 98

Conread position: 533-799
Cow position: chr16:47402724-47402981 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 122

Conread position: 557-797
Cow position: chr16:47787326-47787551 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 173, 7

Conread position: 571-797
Cow position: chr16:23877142-23876931 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 159, 54

Conread position: 579-832
Cow position: chr16:3145001-3144766 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 154, 69

Conread position: 644-800
Cow position: chr16:37806935-37807088 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 29

Conread position: 660-803
Cow position: chr16:1566209-1566069 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 73, 12

Conread position: 660-832
Cow position: chr16:14663843-14663679 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 12

Show alignments to all cow chromosomes.