Cow genome map
| Conread name: | Pig4-TMW8023I01 |
| Conread position: | 3-434 |
| Cow position: | chr18:12992662-12993100 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 73 |
| Conread position: | 3-810 |
| Cow position: | chr18:15852225-15853015 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 78 |
| Conread position: | 6-272 |
| Cow position: | chr18:51695275-51695555 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 68, 206 |
| Conread position: | 38-803 |
| Cow position: | chr18:16175015-16174234 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 189 |
| Conread position: | 38-803 |
| Cow position: | chr18:36510222-36511006 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 187 |
| Conread position: | 38-803 |
| Cow position: | chr18:40482602-40483392 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 479 |
| Conread position: | 38-807 |
| Cow position: | chr18:4947560-4948334 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 37 |
| Conread position: | 38-832 |
| Cow position: | chr18:14417572-14418380 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 645 |
| Conread position: | 38-832 |
| Cow position: | chr18:29865005-29864198 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 584 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 187 |
| Conread position: | 39-799 |
| Cow position: | chr18:56485039-56484291 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 44-799 |
| Cow position: | chr18:11273246-11272464 (view UCSC Genome Browser custom track) |
| Alignm length: | 792 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 618 |
| Conread position: | 44-799 |
| Cow position: | chr18:32166312-32165546 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 181 |
| Conread position: | 46-832 |
| Cow position: | chr18:37507575-37508375 (view UCSC Genome Browser custom track) |
| Alignm length: | 824 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 354 |
| Conread position: | 54-832 |
| Cow position: | chr18:46867290-46866499 (view UCSC Genome Browser custom track) |
| Alignm length: | 819 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 19 |
| Conread position: | 79-803 |
| Cow position: | chr18:16147341-16146627 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 100 |
| Conread position: | 93-807 |
| Cow position: | chr18:52654477-52655204 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 145 |
| Conread position: | 100-799 |
| Cow position: | chr18:47743157-47743874 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 573 |
| Conread position: | 133-832 |
| Cow position: | chr18:27836370-27835677 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 96 |
| Conread position: | 184-804 |
| Cow position: | chr18:999218-999830 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 230-803 |
| Cow position: | chr18:23703277-23702697 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 431 |
| Conread position: | 230-816 |
| Cow position: | chr18:18853028-18853614 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 258 |
| Conread position: | 230-829 |
| Cow position: | chr18:37701682-37701085 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 430 |
| Conread position: | 231-797 |
| Cow position: | chr18:9722435-9722986 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 340 |
| Conread position: | 274-799 |
| Cow position: | chr18:51460985-51460459 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 367 |
| Conread position: | 274-832 |
| Cow position: | chr18:16136821-16136259 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 381 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 33, 106 |
| Conread position: | 306-775 |
| Cow position: | chr18:8644899-8645369 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 303 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 113, 30 |
| Conread position: | 306-783 |
| Cow position: | chr18:16244578-16244102 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 320 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 155, 100 |
| Conread position: | 307-799 |
| Cow position: | chr18:22183624-22183143 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 66 |
| Conread position: | 308-832 |
| Cow position: | chr18:40315531-40315017 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 179 |
| Conread position: | 309-832 |
| Cow position: | chr18:37156844-37156337 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 212 |
| Conread position: | 327-797 |
| Cow position: | chr18:28766716-28767179 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 320 |
| Conread position: | 336-799 |
| Cow position: | chr18:51344031-51344490 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 8 |
| Conread position: | 336-808 |
| Cow position: | chr18:6458814-6459263 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 27 |
| Conread position: | 344-795 |
| Cow position: | chr18:32438171-32437727 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 303 |
| Conread position: | 349-799 |
| Cow position: | chr18:40158250-40158708 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 285 |
| Conread position: | 355-803 |
| Cow position: | chr18:19456795-19457248 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 310 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 17, 241 |
| Conread position: | 386-799 |
| Cow position: | chr18:40290793-40290379 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 70, 59 |
| Conread position: | 425-803 |
| Cow position: | chr18:12273832-12274202 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 430-803 |
| Cow position: | chr18:27167654-27168012 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 80, 119 |
| Conread position: | 461-808 |
| Cow position: | chr18:14792831-14792488 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 48, 70 |
| Conread position: | 474-797 |
| Cow position: | chr18:30762897-30762581 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 173 |
| Conread position: | 475-799 |
| Cow position: | chr18:39813562-39813250 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 25 |
| Conread position: | 500-799 |
| Cow position: | chr18:37676633-37676911 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 131 |
| Conread position: | 500-799 |
| Cow position: | chr18:52631156-52630865 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 522-799 |
| Cow position: | chr18:29070556-29070830 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 118 |
| Conread position: | 524-799 |
| Cow position: | chr18:25941016-25941282 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 18, 121 |
| Conread position: | 552-799 |
| Cow position: | chr18:604308-604074 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 552-803 |
| Cow position: | chr18:37664531-37664784 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 18, 146 |
| Conread position: | 558-795 |
| Cow position: | chr18:33791075-33791311 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 17, 115 |
| Conread position: | 572-832 |
| Cow position: | chr18:32655858-32656097 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 162, 53 |
| Conread position: | 597-797 |
| Cow position: | chr18:55416921-55417104 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 630-832 |
| Cow position: | chr18:2364225-2364034 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 33 |
Show alignments to all cow chromosomes.