Cow genome map
| Conread name: | Pig4-TMW8023I01 |
| Conread position: | 1-305 |
| Cow position: | chr21:24085154-24084834 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 1-832 |
| Cow position: | chr21:30563316-30564152 (view UCSC Genome Browser custom track) |
| Alignm length: | 868 |
| Alignm identity: | 591 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 174 |
| Conread position: | 3-195 |
| Cow position: | chr21:41404964-41405161 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 3-631 |
| Cow position: | chr21:405510-404883 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 422 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 68, 175 |
| Conread position: | 3-798 |
| Cow position: | chr21:26635509-26634699 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 222 |
| Conread position: | 3-799 |
| Cow position: | chr21:19612408-19613220 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 207 |
| Conread position: | 3-802 |
| Cow position: | chr21:2903235-2904021 (view UCSC Genome Browser custom track) |
| Alignm length: | 827 |
| Alignm identity: | 516 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 68, 335 |
| Conread position: | 3-808 |
| Cow position: | chr21:22751794-22751001 (view UCSC Genome Browser custom track) |
| Alignm length: | 837 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 36-609 |
| Cow position: | chr21:34035305-34034732 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 37 |
| Conread position: | 37-799 |
| Cow position: | chr21:11507296-11508070 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 173 |
| Conread position: | 38-266 |
| Cow position: | chr21:23708909-23709142 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 38-802 |
| Cow position: | chr21:5012027-5011274 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 88 |
| Conread position: | 38-802 |
| Cow position: | chr21:40269989-40269207 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 186 |
| Conread position: | 38-803 |
| Cow position: | chr21:147605-148384 (view UCSC Genome Browser custom track) |
| Alignm length: | 800 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 38-803 |
| Cow position: | chr21:2417892-2418669 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 56 |
| Conread position: | 38-803 |
| Cow position: | chr21:28257105-28257881 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 162 |
| Conread position: | 38-808 |
| Cow position: | chr21:3780457-3781245 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 5 |
| Conread position: | 38-808 |
| Cow position: | chr21:5018823-5019614 (view UCSC Genome Browser custom track) |
| Alignm length: | 809 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 647 |
| Conread position: | 38-832 |
| Cow position: | chr21:21025140-21025963 (view UCSC Genome Browser custom track) |
| Alignm length: | 845 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 87 |
| Conread position: | 38-832 |
| Cow position: | chr21:27285143-27285936 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 77 |
| Conread position: | 38-832 |
| Cow position: | chr21:31514633-31513830 (view UCSC Genome Browser custom track) |
| Alignm length: | 827 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 39-808 |
| Cow position: | chr21:39426756-39427544 (view UCSC Genome Browser custom track) |
| Alignm length: | 808 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 36 |
| Conread position: | 43-811 |
| Cow position: | chr21:27030940-27031722 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 51 |
| Conread position: | 44-633 |
| Cow position: | chr21:25125299-25125900 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 45-803 |
| Cow position: | chr21:13298282-13299035 (view UCSC Genome Browser custom track) |
| Alignm length: | 782 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 117 |
| Conread position: | 75-798 |
| Cow position: | chr21:10284869-10285625 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 58 |
| Conread position: | 75-799 |
| Cow position: | chr21:42915528-42916266 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 593 |
| Conread position: | 93-800 |
| Cow position: | chr21:31250732-31251469 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 305 |
| Conread position: | 103-803 |
| Cow position: | chr21:26402008-26401287 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 92 |
| Conread position: | 117-727 |
| Cow position: | chr21:26237833-26238440 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 66 |
| Conread position: | 157-832 |
| Cow position: | chr21:4737494-4738162 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 230-799 |
| Cow position: | chr21:4036137-4036712 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 430 |
| Conread position: | 230-803 |
| Cow position: | chr21:2672385-2671821 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 232-774 |
| Cow position: | chr21:4405634-4406165 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 357 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 242-803 |
| Cow position: | chr21:36980553-36981112 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 222 |
| Conread position: | 244-811 |
| Cow position: | chr21:3804829-3805399 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 188 |
| Conread position: | 275-799 |
| Cow position: | chr21:6967524-6967001 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 379 |
| Conread position: | 279-832 |
| Cow position: | chr21:28987077-28987630 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 380 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 29, 227 |
| Conread position: | 307-803 |
| Cow position: | chr21:27149581-27149093 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 340 |
| Conread position: | 308-797 |
| Cow position: | chr21:11290654-11291146 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 334 |
| Conread position: | 342-803 |
| Cow position: | chr21:28853845-28853383 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 324 |
| Conread position: | 349-832 |
| Cow position: | chr21:46290410-46290884 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 42 |
| Conread position: | 354-798 |
| Cow position: | chr21:38019261-38019693 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 7 |
| Conread position: | 385-832 |
| Cow position: | chr21:21172232-21171801 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 308 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 141, 85 |
| Conread position: | 392-832 |
| Cow position: | chr21:36375052-36375475 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 243 |
| Conread position: | 395-805 |
| Cow position: | chr21:4481377-4481778 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 52 |
| Conread position: | 417-797 |
| Cow position: | chr21:7063597-7063213 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 8 |
| Conread position: | 431-832 |
| Cow position: | chr21:32397953-32397564 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 216 |
| Conread position: | 445-799 |
| Cow position: | chr21:41797610-41797264 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 202 |
| Conread position: | 448-773 |
| Cow position: | chr21:15249053-15248749 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 460-803 |
| Cow position: | chr21:4737331-4736997 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 169 |
| Conread position: | 461-799 |
| Cow position: | chr21:34903244-34902916 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 186 |
| Conread position: | 502-799 |
| Cow position: | chr21:39225888-39225597 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 23, 140 |
| Conread position: | 521-803 |
| Cow position: | chr21:34656143-34656422 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 46, 136 |
| Conread position: | 526-799 |
| Cow position: | chr21:4091532-4091796 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 16, 115 |
| Conread position: | 537-831 |
| Cow position: | chr21:29000146-29000433 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 28, 103 |
| Conread position: | 571-775 |
| Cow position: | chr21:39092995-39093190 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 158, 54 |
| Conread position: | 574-803 |
| Cow position: | chr21:27610493-27610279 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 159, 19 |
| Conread position: | 574-807 |
| Cow position: | chr21:21785913-21786147 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 95 |
| Conread position: | 576-797 |
| Cow position: | chr21:29949713-29949506 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 154, 64 |
| Conread position: | 630-799 |
| Cow position: | chr21:4899884-4899717 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 642-797 |
| Cow position: | chr21:14954619-14954772 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 13, 36 |
Show alignments to all cow chromosomes.