Cow genome map
| Conread name: | Pig4-TMW8023I01 |
| Conread position: | 3-462 |
| Cow position: | chr28:22324652-22324167 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 330 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 68, 53 |
| Conread position: | 3-478 |
| Cow position: | chr28:22310049-22309549 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 337 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 68, 53 |
| Conread position: | 3-623 |
| Cow position: | chr28:591437-590783 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 508 |
| Conread position: | 3-799 |
| Cow position: | chr28:6537288-6536469 (view UCSC Genome Browser custom track) |
| Alignm length: | 840 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 403 |
| Conread position: | 3-799 |
| Cow position: | chr28:24590379-24591197 (view UCSC Genome Browser custom track) |
| Alignm length: | 837 |
| Alignm identity: | 581 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 162 |
| Conread position: | 3-803 |
| Cow position: | chr28:32304724-32303898 (view UCSC Genome Browser custom track) |
| Alignm length: | 849 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 33-803 |
| Cow position: | chr28:22259602-22258815 (view UCSC Genome Browser custom track) |
| Alignm length: | 809 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 179 |
| Conread position: | 38-797 |
| Cow position: | chr28:1459652-1460430 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 187 |
| Conread position: | 38-803 |
| Cow position: | chr28:1166337-1165556 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 345 |
| Conread position: | 38-803 |
| Cow position: | chr28:1216278-1215500 (view UCSC Genome Browser custom track) |
| Alignm length: | 800 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 111 |
| Conread position: | 38-803 |
| Cow position: | chr28:1813376-1812602 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 99 |
| Conread position: | 38-803 |
| Cow position: | chr28:2086022-2086800 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 345 |
| Conread position: | 38-803 |
| Cow position: | chr28:12408668-12407882 (view UCSC Genome Browser custom track) |
| Alignm length: | 807 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 33 |
| Conread position: | 38-803 |
| Cow position: | chr28:15034554-15033751 (view UCSC Genome Browser custom track) |
| Alignm length: | 812 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 136 |
| Conread position: | 38-803 |
| Cow position: | chr28:17389958-17390742 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 458 |
| Conread position: | 38-809 |
| Cow position: | chr28:784214-785006 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 637 |
| Conread position: | 38-832 |
| Cow position: | chr28:8380594-8381400 (view UCSC Genome Browser custom track) |
| Alignm length: | 830 |
| Alignm identity: | 581 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 361 |
| Conread position: | 38-832 |
| Cow position: | chr28:10580317-10579505 (view UCSC Genome Browser custom track) |
| Alignm length: | 837 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 189 |
| Conread position: | 38-832 |
| Cow position: | chr28:17665750-17664963 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 38-832 |
| Cow position: | chr28:33638101-33638921 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 136 |
| Conread position: | 39-832 |
| Cow position: | chr28:3190694-3189889 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 186 |
| Conread position: | 44-832 |
| Cow position: | chr28:13461534-13462323 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 178 |
| Conread position: | 75-832 |
| Cow position: | chr28:24884449-24885212 (view UCSC Genome Browser custom track) |
| Alignm length: | 786 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 134 |
| Conread position: | 91-646 |
| Cow position: | chr28:759584-759023 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 130 |
| Conread position: | 96-803 |
| Cow position: | chr28:7028166-7027441 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 177 |
| Conread position: | 102-803 |
| Cow position: | chr28:10471291-10471984 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 108 |
| Conread position: | 136-799 |
| Cow position: | chr28:9180532-9181199 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 73 |
| Conread position: | 145-797 |
| Cow position: | chr28:8907694-8907041 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 300 |
| Conread position: | 230-803 |
| Cow position: | chr28:5209873-5210452 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 275 |
| Conread position: | 230-803 |
| Cow position: | chr28:31850170-31849590 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 122 |
| Conread position: | 230-807 |
| Cow position: | chr28:5567913-5568491 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 243 |
| Conread position: | 237-799 |
| Cow position: | chr28:22041620-22041066 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 154 |
| Conread position: | 242-832 |
| Cow position: | chr28:23311534-23310951 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 112 |
| Conread position: | 268-803 |
| Cow position: | chr28:2121259-2121793 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 358 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 32, 81 |
| Conread position: | 274-797 |
| Cow position: | chr28:30805572-30806095 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 380 |
| Conread position: | 274-811 |
| Cow position: | chr28:21567709-21568244 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 318-803 |
| Cow position: | chr28:20664987-20665452 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 323 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 207, 35 |
| Conread position: | 355-803 |
| Cow position: | chr28:24559789-24560243 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 296 |
| Conread position: | 374-799 |
| Cow position: | chr28:15918610-15918197 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 266 |
| Conread position: | 386-799 |
| Cow position: | chr28:7828419-7828825 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 40 |
| Conread position: | 408-799 |
| Cow position: | chr28:28927775-28928159 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 239 |
| Conread position: | 417-803 |
| Cow position: | chr28:29760671-29760295 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 148, 113 |
| Conread position: | 445-813 |
| Cow position: | chr28:25676017-25675661 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 460-807 |
| Cow position: | chr28:30973955-30974297 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 64, 182 |
| Conread position: | 461-799 |
| Cow position: | chr28:918575-918244 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 181 |
| Conread position: | 461-799 |
| Cow position: | chr28:934268-933937 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 181 |
| Conread position: | 471-799 |
| Cow position: | chr28:34581926-34582247 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 176 |
| Conread position: | 478-797 |
| Cow position: | chr28:26986947-26986642 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 249, 40 |
| Conread position: | 522-799 |
| Cow position: | chr28:5635897-5636165 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 34, 118 |
| Conread position: | 522-799 |
| Cow position: | chr28:34729991-34730258 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 524-803 |
| Cow position: | chr28:10301905-10302173 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 525-803 |
| Cow position: | chr28:22578799-22579066 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 60, 108 |
| Conread position: | 531-803 |
| Cow position: | chr28:10616978-10616712 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 536-809 |
| Cow position: | chr28:12152435-12152696 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 39, 116 |
| Conread position: | 552-799 |
| Cow position: | chr28:7335073-7335316 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 604-803 |
| Cow position: | chr28:22231187-22230997 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 642-797 |
| Cow position: | chr28:32588860-32588707 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 642-799 |
| Cow position: | chr28:2643887-2644042 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 644-799 |
| Cow position: | chr28:21894125-21894278 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 660-832 |
| Cow position: | chr28:30534874-30534710 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 665-811 |
| Cow position: | chr28:18517950-18517807 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 7 |
Show alignments to all cow chromosomes.