Cow genome map
| Conread name: | Pig4-TMW8023I01 |
| Conread position: | 3-797 |
| Cow position: | chr29:7845876-7846687 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 581 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 222 |
| Conread position: | 3-797 |
| Cow position: | chr29:38207178-38206365 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 222 |
| Conread position: | 3-799 |
| Cow position: | chr29:609162-608333 (view UCSC Genome Browser custom track) |
| Alignm length: | 851 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 222 |
| Conread position: | 3-799 |
| Cow position: | chr29:19526800-19525991 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 576 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 222 |
| Conread position: | 3-799 |
| Cow position: | chr29:21431366-21430558 (view UCSC Genome Browser custom track) |
| Alignm length: | 835 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 222 |
| Conread position: | 3-799 |
| Cow position: | chr29:32558265-32557451 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 222 |
| Conread position: | 3-799 |
| Cow position: | chr29:35298396-35299220 (view UCSC Genome Browser custom track) |
| Alignm length: | 835 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 222 |
| Conread position: | 3-832 |
| Cow position: | chr29:19889072-19889902 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 598 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 32-811 |
| Cow position: | chr29:647325-648130 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 101 |
| Conread position: | 37-803 |
| Cow position: | chr29:40501487-40500712 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 188 |
| Conread position: | 38-797 |
| Cow position: | chr29:10022811-10022033 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 187 |
| Conread position: | 38-799 |
| Cow position: | chr29:31182923-31183702 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 634 |
| Conread position: | 38-803 |
| Cow position: | chr29:2465355-2464572 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 38-803 |
| Cow position: | chr29:5236542-5237316 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 407 |
| Conread position: | 38-803 |
| Cow position: | chr29:16345733-16346505 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 283 |
| Conread position: | 38-803 |
| Cow position: | chr29:39078190-39077413 (view UCSC Genome Browser custom track) |
| Alignm length: | 800 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 38-811 |
| Cow position: | chr29:16172581-16171799 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 33 |
| Conread position: | 38-812 |
| Cow position: | chr29:13851350-13850562 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 338 |
| Conread position: | 38-831 |
| Cow position: | chr29:2691684-2692487 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 5 |
| Conread position: | 38-832 |
| Cow position: | chr29:46939-46133 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 38-832 |
| Cow position: | chr29:7429605-7428790 (view UCSC Genome Browser custom track) |
| Alignm length: | 838 |
| Alignm identity: | 582 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 193 |
| Conread position: | 38-832 |
| Cow position: | chr29:25931000-25930194 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 627 |
| Conread position: | 38-832 |
| Cow position: | chr29:26163312-26162513 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 38-832 |
| Cow position: | chr29:34798290-34797481 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 174 |
| Conread position: | 38-832 |
| Cow position: | chr29:45206044-45206838 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 300 |
| Conread position: | 46-832 |
| Cow position: | chr29:409729-408933 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 49-803 |
| Cow position: | chr29:43325048-43325813 (view UCSC Genome Browser custom track) |
| Alignm length: | 787 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 163 |
| Conread position: | 52-799 |
| Cow position: | chr29:15625186-15624408 (view UCSC Genome Browser custom track) |
| Alignm length: | 800 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 67 |
| Conread position: | 55-832 |
| Cow position: | chr29:19621734-19620944 (view UCSC Genome Browser custom track) |
| Alignm length: | 819 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 633 |
| Conread position: | 93-832 |
| Cow position: | chr29:10645833-10645086 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 130 |
| Conread position: | 143-802 |
| Cow position: | chr29:9853463-9852776 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 95 |
| Conread position: | 180-633 |
| Cow position: | chr29:29617637-29617167 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 230-522 |
| Cow position: | chr29:22951449-22951143 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 230-644 |
| Cow position: | chr29:38393501-38393910 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 230-799 |
| Cow position: | chr29:16688561-16689129 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 153 |
| Conread position: | 231-797 |
| Cow position: | chr29:31122555-31123130 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 432 |
| Conread position: | 274-799 |
| Cow position: | chr29:13922276-13922801 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 380 |
| Conread position: | 284-799 |
| Cow position: | chr29:15967767-15967259 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 238, 363 |
| Conread position: | 306-803 |
| Cow position: | chr29:15996570-15996080 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 351 |
| Conread position: | 307-799 |
| Cow position: | chr29:27978012-27977534 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 160 |
| Conread position: | 336-788 |
| Cow position: | chr29:17976316-17976748 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 28 |
| Conread position: | 365-803 |
| Cow position: | chr29:34694805-34695236 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 292 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 366-803 |
| Cow position: | chr29:6933372-6933795 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 189 |
| Conread position: | 372-799 |
| Cow position: | chr29:40470299-40470710 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 201 |
| Conread position: | 375-797 |
| Cow position: | chr29:15261112-15260697 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 272 |
| Conread position: | 381-803 |
| Cow position: | chr29:23978592-23979007 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 246 |
| Conread position: | 401-832 |
| Cow position: | chr29:10844861-10845281 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 10 |
| Conread position: | 486-793 |
| Cow position: | chr29:10851723-10852018 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 131 |
| Conread position: | 496-803 |
| Cow position: | chr29:18524714-18524420 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 54 |
| Conread position: | 503-797 |
| Cow position: | chr29:39425133-39424846 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 21, 144 |
| Conread position: | 521-788 |
| Cow position: | chr29:17342683-17342940 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 46, 90 |
| Conread position: | 525-782 |
| Cow position: | chr29:42256957-42256708 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 120 |
| Conread position: | 525-808 |
| Cow position: | chr29:1477193-1477466 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 533-832 |
| Cow position: | chr29:13584263-13584544 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 91 |
| Conread position: | 540-816 |
| Cow position: | chr29:43965463-43965183 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 31, 167 |
| Conread position: | 571-799 |
| Cow position: | chr29:13898746-13898960 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 159, 69 |
| Conread position: | 664-832 |
| Cow position: | chr29:35274857-35274697 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 675-803 |
| Cow position: | chr29:19656076-19656202 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 19 |
Show alignments to all cow chromosomes.