Cow genome map
Conread name: | Pig4-TMW8023I01 |
Conread position: | 3-269 |
Cow position: | chr5:23939231-23939499 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 183 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 73, 13 |
Conread position: | 3-728 |
Cow position: | chr5:37378434-37379179 (view UCSC Genome Browser custom track) |
Alignm length: | 766 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 181 |
Conread position: | 3-799 |
Cow position: | chr5:3965757-3966552 (view UCSC Genome Browser custom track) |
Alignm length: | 830 |
Alignm identity: | 570 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 213 |
Conread position: | 3-799 |
Cow position: | chr5:4756875-4756061 (view UCSC Genome Browser custom track) |
Alignm length: | 836 |
Alignm identity: | 576 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 196 |
Conread position: | 3-799 |
Cow position: | chr5:18121174-18120359 (view UCSC Genome Browser custom track) |
Alignm length: | 835 |
Alignm identity: | 584 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 207 |
Conread position: | 3-799 |
Cow position: | chr5:23959022-23958210 (view UCSC Genome Browser custom track) |
Alignm length: | 835 |
Alignm identity: | 580 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 222 |
Conread position: | 3-799 |
Cow position: | chr5:31707871-31708702 (view UCSC Genome Browser custom track) |
Alignm length: | 838 |
Alignm identity: | 586 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 222 |
Conread position: | 3-799 |
Cow position: | chr5:58197324-58198141 (view UCSC Genome Browser custom track) |
Alignm length: | 836 |
Alignm identity: | 572 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 222 |
Conread position: | 3-799 |
Cow position: | chr5:59061944-59062758 (view UCSC Genome Browser custom track) |
Alignm length: | 833 |
Alignm identity: | 583 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 448 |
Conread position: | 3-832 |
Cow position: | chr5:28333177-28332393 (view UCSC Genome Browser custom track) |
Alignm length: | 845 |
Alignm identity: | 647 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 218 |
Conread position: | 38-799 |
Cow position: | chr5:4684461-4683683 (view UCSC Genome Browser custom track) |
Alignm length: | 799 |
Alignm identity: | 556 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 26 |
Conread position: | 38-799 |
Cow position: | chr5:5104558-5105342 (view UCSC Genome Browser custom track) |
Alignm length: | 797 |
Alignm identity: | 567 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 172 |
Conread position: | 38-803 |
Cow position: | chr5:10920181-10920965 (view UCSC Genome Browser custom track) |
Alignm length: | 804 |
Alignm identity: | 548 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 109 |
Conread position: | 38-803 |
Cow position: | chr5:18560064-18559279 (view UCSC Genome Browser custom track) |
Alignm length: | 807 |
Alignm identity: | 540 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 33 |
Conread position: | 38-803 |
Cow position: | chr5:23830977-23830199 (view UCSC Genome Browser custom track) |
Alignm length: | 799 |
Alignm identity: | 540 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 94 |
Conread position: | 38-803 |
Cow position: | chr5:24295957-24296728 (view UCSC Genome Browser custom track) |
Alignm length: | 792 |
Alignm identity: | 548 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 34 |
Conread position: | 38-803 |
Cow position: | chr5:37733692-37734471 (view UCSC Genome Browser custom track) |
Alignm length: | 803 |
Alignm identity: | 554 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 436 |
Conread position: | 38-803 |
Cow position: | chr5:43988445-43989186 (view UCSC Genome Browser custom track) |
Alignm length: | 776 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 171 |
Conread position: | 38-803 |
Cow position: | chr5:64780671-64779886 (view UCSC Genome Browser custom track) |
Alignm length: | 804 |
Alignm identity: | 551 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 187 |
Conread position: | 38-803 |
Cow position: | chr5:76096395-76097181 (view UCSC Genome Browser custom track) |
Alignm length: | 807 |
Alignm identity: | 544 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 95 |
Conread position: | 38-809 |
Cow position: | chr5:6153555-6152762 (view UCSC Genome Browser custom track) |
Alignm length: | 810 |
Alignm identity: | 566 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 644 |
Conread position: | 38-831 |
Cow position: | chr5:59283659-59284450 (view UCSC Genome Browser custom track) |
Alignm length: | 824 |
Alignm identity: | 565 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 192 |
Conread position: | 38-832 |
Cow position: | chr5:12731372-12730568 (view UCSC Genome Browser custom track) |
Alignm length: | 833 |
Alignm identity: | 577 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 172 |
Conread position: | 43-803 |
Cow position: | chr5:24099999-24100769 (view UCSC Genome Browser custom track) |
Alignm length: | 795 |
Alignm identity: | 540 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 12 |
Conread position: | 43-832 |
Cow position: | chr5:69622938-69623719 (view UCSC Genome Browser custom track) |
Alignm length: | 826 |
Alignm identity: | 526 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 31, 216 |
Conread position: | 44-338 |
Cow position: | chr5:9037792-9037487 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 212 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 32, 115 |
Conread position: | 44-803 |
Cow position: | chr5:5666236-5665478 (view UCSC Genome Browser custom track) |
Alignm length: | 789 |
Alignm identity: | 534 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 86 |
Conread position: | 48-803 |
Cow position: | chr5:21918750-21919482 (view UCSC Genome Browser custom track) |
Alignm length: | 773 |
Alignm identity: | 555 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 99 |
Conread position: | 61-554 |
Cow position: | chr5:14784000-14783506 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 114 |
Conread position: | 67-803 |
Cow position: | chr5:12642062-12641323 (view UCSC Genome Browser custom track) |
Alignm length: | 770 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 206 |
Conread position: | 75-486 |
Cow position: | chr5:33188043-33188430 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 274 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 224, 69 |
Conread position: | 75-803 |
Cow position: | chr5:4386607-4387348 (view UCSC Genome Browser custom track) |
Alignm length: | 756 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 103 |
Conread position: | 84-399 |
Cow position: | chr5:31100046-31099708 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 233 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 66, 5 |
Conread position: | 85-511 |
Cow position: | chr5:66495699-66496127 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 301 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 7, 48 |
Conread position: | 93-799 |
Cow position: | chr5:58191363-58190640 (view UCSC Genome Browser custom track) |
Alignm length: | 744 |
Alignm identity: | 527 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 178 |
Conread position: | 93-832 |
Cow position: | chr5:1228191-1228934 (view UCSC Genome Browser custom track) |
Alignm length: | 774 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 170 |
Conread position: | 100-799 |
Cow position: | chr5:46665406-46666121 (view UCSC Genome Browser custom track) |
Alignm length: | 739 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 29 |
Conread position: | 110-803 |
Cow position: | chr5:29767531-29768243 (view UCSC Genome Browser custom track) |
Alignm length: | 731 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 80 |
Conread position: | 129-799 |
Cow position: | chr5:49118903-49118219 (view UCSC Genome Browser custom track) |
Alignm length: | 707 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 44 |
Conread position: | 230-645 |
Cow position: | chr5:34904176-34904597 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 185 |
Conread position: | 230-799 |
Cow position: | chr5:57963997-57963422 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 29 |
Conread position: | 230-803 |
Cow position: | chr5:49520259-49520835 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 126 |
Conread position: | 230-832 |
Cow position: | chr5:1340379-1339778 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 252 |
Conread position: | 234-803 |
Cow position: | chr5:55834241-55833683 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 101 |
Conread position: | 256-799 |
Cow position: | chr5:46791424-46791965 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 303 |
Conread position: | 274-803 |
Cow position: | chr5:54787523-54786998 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 224 |
Conread position: | 306-803 |
Cow position: | chr5:47079943-47080416 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 37 |
Conread position: | 307-799 |
Cow position: | chr5:42506384-42506876 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 336 |
Conread position: | 327-799 |
Cow position: | chr5:59145020-59145487 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 322 |
Conread position: | 338-803 |
Cow position: | chr5:25930011-25929567 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 35 |
Conread position: | 344-803 |
Cow position: | chr5:48806769-48806317 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 315 |
Conread position: | 353-803 |
Cow position: | chr5:12681161-12680698 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 50 |
Conread position: | 370-775 |
Cow position: | chr5:62203270-62203664 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 40 |
Conread position: | 429-803 |
Cow position: | chr5:7584232-7583869 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 268 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 135, 101 |
Conread position: | 449-797 |
Cow position: | chr5:9056434-9056775 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 198 |
Conread position: | 457-799 |
Cow position: | chr5:4964589-4964254 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 245 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 70, 190 |
Conread position: | 460-803 |
Cow position: | chr5:57001278-57001621 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 240 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 65, 86 |
Conread position: | 462-803 |
Cow position: | chr5:26626422-26626085 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 240 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 65, 179 |
Conread position: | 500-797 |
Cow position: | chr5:13407421-13407711 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 228 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 24, 147 |
Conread position: | 522-799 |
Cow position: | chr5:51167470-51167184 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 190 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 525-797 |
Cow position: | chr5:29031122-29031385 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 211 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 42, 120 |
Conread position: | 540-797 |
Cow position: | chr5:28344824-28345074 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 190 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 20, 107 |
Conread position: | 552-799 |
Cow position: | chr5:41066061-41066296 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 186 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 22, 90 |
Conread position: | 557-803 |
Cow position: | chr5:6527811-6528045 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 178 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 98, 13 |
Conread position: | 564-803 |
Cow position: | chr5:70616835-70617063 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 176 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 165, 71 |
Conread position: | 586-803 |
Cow position: | chr5:58244903-58244700 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 161 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 144, 63 |
Conread position: | 595-803 |
Cow position: | chr5:14523869-14523667 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 154 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 32, 53 |
Conread position: | 628-831 |
Cow position: | chr5:50391160-50390963 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 153 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 11, 51 |
Conread position: | 642-797 |
Cow position: | chr5:11923167-11923014 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 13, 36 |
Conread position: | 642-797 |
Cow position: | chr5:30567234-30567388 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 13, 36 |
Conread position: | 658-799 |
Cow position: | chr5:10514298-10514160 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 72, 19 |
Show alignments to all cow chromosomes.