Cow genome map
| Conread name: | Pig4-TMW8023I01 |
| Conread position: | 3-225 |
| Cow position: | chr6:15921380-15921602 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 3-788 |
| Cow position: | chr6:27171026-27171828 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 216 |
| Conread position: | 3-799 |
| Cow position: | chr6:13309933-13309129 (view UCSC Genome Browser custom track) |
| Alignm length: | 824 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 207 |
| Conread position: | 3-799 |
| Cow position: | chr6:13848515-13849330 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 51 |
| Conread position: | 3-799 |
| Cow position: | chr6:17596850-17596033 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 207 |
| Conread position: | 3-799 |
| Cow position: | chr6:28703264-28702444 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 222 |
| Conread position: | 3-799 |
| Cow position: | chr6:39910779-39911580 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 94 |
| Conread position: | 3-799 |
| Cow position: | chr6:40276528-40277327 (view UCSC Genome Browser custom track) |
| Alignm length: | 830 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 222 |
| Conread position: | 3-799 |
| Cow position: | chr6:43619169-43619991 (view UCSC Genome Browser custom track) |
| Alignm length: | 842 |
| Alignm identity: | 582 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 207 |
| Conread position: | 38-799 |
| Cow position: | chr6:5749405-5750187 (view UCSC Genome Browser custom track) |
| Alignm length: | 800 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 187 |
| Conread position: | 38-799 |
| Cow position: | chr6:7139860-7139079 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 172 |
| Conread position: | 38-803 |
| Cow position: | chr6:184062-183281 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 174 |
| Conread position: | 38-803 |
| Cow position: | chr6:5948301-5947523 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 349 |
| Conread position: | 38-803 |
| Cow position: | chr6:6185723-6186502 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 38-803 |
| Cow position: | chr6:8203670-8204438 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 328 |
| Conread position: | 38-803 |
| Cow position: | chr6:28104383-28103599 (view UCSC Genome Browser custom track) |
| Alignm length: | 807 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 142 |
| Conread position: | 38-803 |
| Cow position: | chr6:43792088-43791322 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 127 |
| Conread position: | 38-803 |
| Cow position: | chr6:51716013-51716802 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 38-803 |
| Cow position: | chr6:51731561-51732341 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 38-811 |
| Cow position: | chr6:15139693-15138900 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 645 |
| Conread position: | 38-832 |
| Cow position: | chr6:703692-704497 (view UCSC Genome Browser custom track) |
| Alignm length: | 829 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 589 |
| Conread position: | 38-832 |
| Cow position: | chr6:30273413-30272607 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 38-832 |
| Cow position: | chr6:64717800-64718603 (view UCSC Genome Browser custom track) |
| Alignm length: | 828 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 376 |
| Conread position: | 38-832 |
| Cow position: | chr6:65843096-65843895 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 39-803 |
| Cow position: | chr6:26777685-26776914 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 62 |
| Conread position: | 44-803 |
| Cow position: | chr6:1821140-1820364 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 105 |
| Conread position: | 44-803 |
| Cow position: | chr6:28170394-28171166 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 335 |
| Conread position: | 44-832 |
| Cow position: | chr6:16591448-16592256 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 93-803 |
| Cow position: | chr6:34275235-34274537 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 134 |
| Conread position: | 130-799 |
| Cow position: | chr6:68028720-68029432 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 140-799 |
| Cow position: | chr6:53543680-53544353 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 84 |
| Conread position: | 150-799 |
| Cow position: | chr6:62578605-62577929 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 518 |
| Conread position: | 230-753 |
| Cow position: | chr6:39023172-39022659 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 163 |
| Conread position: | 230-784 |
| Cow position: | chr6:2580106-2580669 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 230-799 |
| Cow position: | chr6:2556326-2556900 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 425 |
| Conread position: | 230-812 |
| Cow position: | chr6:14081234-14081824 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 330 |
| Conread position: | 231-797 |
| Cow position: | chr6:43431672-43431100 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 429 |
| Conread position: | 231-803 |
| Cow position: | chr6:60513737-60514312 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 156 |
| Conread position: | 266-799 |
| Cow position: | chr6:2376432-2376962 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 114 |
| Conread position: | 271-802 |
| Cow position: | chr6:6161842-6162381 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 273-797 |
| Cow position: | chr6:20352363-20351839 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 381 |
| Conread position: | 274-799 |
| Cow position: | chr6:13978486-13979016 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 374 |
| Conread position: | 274-799 |
| Cow position: | chr6:18513289-18513810 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 263 |
| Conread position: | 278-811 |
| Cow position: | chr6:58603241-58603752 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 369 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 306-809 |
| Cow position: | chr6:25791921-25791430 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 59 |
| Conread position: | 307-832 |
| Cow position: | chr6:25216078-25216586 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 50 |
| Conread position: | 307-832 |
| Cow position: | chr6:50487036-50486514 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 328 |
| Conread position: | 309-832 |
| Cow position: | chr6:60403031-60402521 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 346 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 314-803 |
| Cow position: | chr6:35722938-35723443 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 29 |
| Conread position: | 335-823 |
| Cow position: | chr6:24625815-24625325 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 140 |
| Conread position: | 336-832 |
| Cow position: | chr6:38874854-38874375 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 17 |
| Conread position: | 340-820 |
| Cow position: | chr6:15479418-15479888 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 329 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 217, 37 |
| Conread position: | 342-803 |
| Cow position: | chr6:40973992-40974444 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 31 |
| Conread position: | 348-832 |
| Cow position: | chr6:3486585-3486114 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 25 |
| Conread position: | 353-803 |
| Cow position: | chr6:39332728-39332269 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 101 |
| Conread position: | 359-811 |
| Cow position: | chr6:20558122-20557677 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 262 |
| Conread position: | 368-803 |
| Cow position: | chr6:15895949-15895533 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 80, 104 |
| Conread position: | 368-803 |
| Cow position: | chr6:59316380-59315957 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 92 |
| Conread position: | 386-803 |
| Cow position: | chr6:44018979-44018569 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 106 |
| Conread position: | 387-797 |
| Cow position: | chr6:33809487-33809890 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 260 |
| Conread position: | 390-831 |
| Cow position: | chr6:66388982-66388553 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 257 |
| Conread position: | 398-799 |
| Cow position: | chr6:19105047-19104655 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 244 |
| Conread position: | 406-799 |
| Cow position: | chr6:1408790-1408394 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 250 |
| Conread position: | 410-803 |
| Cow position: | chr6:65929109-65929499 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 282 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 116, 209 |
| Conread position: | 417-797 |
| Cow position: | chr6:31913500-31913873 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 230 |
| Conread position: | 423-797 |
| Cow position: | chr6:46479016-46479382 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 11 |
| Conread position: | 466-797 |
| Cow position: | chr6:55785570-55785894 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 181 |
| Conread position: | 480-832 |
| Cow position: | chr6:3275074-3274734 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 259 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 44, 156 |
| Conread position: | 483-803 |
| Cow position: | chr6:49625-49314 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 77, 143 |
| Conread position: | 491-799 |
| Cow position: | chr6:55237645-55237947 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 34, 151 |
| Conread position: | 522-797 |
| Cow position: | chr6:32632807-32633073 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 123 |
| Conread position: | 522-799 |
| Cow position: | chr6:11870943-11870675 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 34, 123 |
| Conread position: | 549-803 |
| Cow position: | chr6:57471821-57472072 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 96, 116 |
| Conread position: | 552-799 |
| Cow position: | chr6:329345-329103 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 552-832 |
| Cow position: | chr6:51091382-51091644 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 571-799 |
| Cow position: | chr6:37386623-37386837 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 159, 69 |
| Conread position: | 573-799 |
| Cow position: | chr6:6094279-6094491 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 157, 67 |
| Conread position: | 592-799 |
| Cow position: | chr6:67552537-67552737 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 594-832 |
| Cow position: | chr6:40000423-40000202 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 139, 27 |
| Conread position: | 610-797 |
| Cow position: | chr6:45936333-45936518 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 6, 38 |
| Conread position: | 626-803 |
| Cow position: | chr6:1535784-1535959 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 642-797 |
| Cow position: | chr6:45902788-45902635 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 658-797 |
| Cow position: | chr6:2446096-2446232 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 658-797 |
| Cow position: | chr6:13757840-13757976 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 658-797 |
| Cow position: | chr6:20088328-20088192 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 667-832 |
| Cow position: | chr6:36530413-36530571 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 66, 27 |
Show alignments to all cow chromosomes.