Cow genome map
| Conread name: | Pig4-TMW8023I01 |
| Conread position: | 3-644 |
| Cow position: | chr9:4717543-4718210 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 299 |
| Conread position: | 3-775 |
| Cow position: | chr9:44384638-44385424 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 207 |
| Conread position: | 3-799 |
| Cow position: | chr9:779444-778634 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 52 |
| Conread position: | 3-799 |
| Cow position: | chr9:2871708-2872533 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 221 |
| Conread position: | 3-799 |
| Cow position: | chr9:31066093-31066908 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 222 |
| Conread position: | 3-799 |
| Cow position: | chr9:38677519-38678317 (view UCSC Genome Browser custom track) |
| Alignm length: | 828 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 387 |
| Conread position: | 3-799 |
| Cow position: | chr9:50792088-50792905 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 224 |
| Conread position: | 3-811 |
| Cow position: | chr9:30828116-30828950 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 207 |
| Conread position: | 3-832 |
| Cow position: | chr9:47043335-47044180 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 607 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 207 |
| Conread position: | 38-799 |
| Cow position: | chr9:28679375-28680157 (view UCSC Genome Browser custom track) |
| Alignm length: | 791 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 178 |
| Conread position: | 38-800 |
| Cow position: | chr9:22436363-22437130 (view UCSC Genome Browser custom track) |
| Alignm length: | 792 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 204 |
| Conread position: | 38-803 |
| Cow position: | chr9:1994997-1994221 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 182 |
| Conread position: | 38-803 |
| Cow position: | chr9:7004141-7004915 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 176 |
| Conread position: | 38-803 |
| Cow position: | chr9:7060666-7059877 (view UCSC Genome Browser custom track) |
| Alignm length: | 812 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 371 |
| Conread position: | 38-803 |
| Cow position: | chr9:9014483-9015260 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 38-803 |
| Cow position: | chr9:21410717-21411498 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 38-803 |
| Cow position: | chr9:28023210-28023996 (view UCSC Genome Browser custom track) |
| Alignm length: | 806 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 180 |
| Conread position: | 38-803 |
| Cow position: | chr9:42311088-42311881 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 344 |
| Conread position: | 38-832 |
| Cow position: | chr9:31808985-31809795 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 638 |
| Conread position: | 38-832 |
| Cow position: | chr9:51180769-51179962 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 186 |
| Conread position: | 39-797 |
| Cow position: | chr9:1250586-1249815 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 39-803 |
| Cow position: | chr9:3224230-3223470 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 191 |
| Conread position: | 39-803 |
| Cow position: | chr9:13474364-13473592 (view UCSC Genome Browser custom track) |
| Alignm length: | 800 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 266 |
| Conread position: | 42-803 |
| Cow position: | chr9:30489007-30489753 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 44-777 |
| Cow position: | chr9:17901158-17900402 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 88 |
| Conread position: | 45-803 |
| Cow position: | chr9:59537517-59538290 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 163 |
| Conread position: | 48-799 |
| Cow position: | chr9:56303032-56302258 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 177 |
| Conread position: | 49-802 |
| Cow position: | chr9:12183010-12182240 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 63 |
| Conread position: | 84-394 |
| Cow position: | chr9:54925993-54926317 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 84-645 |
| Cow position: | chr9:9328540-9327960 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 93-803 |
| Cow position: | chr9:47004197-47004927 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 118 |
| Conread position: | 98-404 |
| Cow position: | chr9:29044292-29043963 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 126 |
| Conread position: | 99-799 |
| Cow position: | chr9:203822-203105 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 572 |
| Conread position: | 125-803 |
| Cow position: | chr9:34769641-34770354 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 129-799 |
| Cow position: | chr9:14001560-14002245 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 137-802 |
| Cow position: | chr9:16177101-16177779 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 105 |
| Conread position: | 151-803 |
| Cow position: | chr9:59481312-59480663 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 303 |
| Conread position: | 230-645 |
| Cow position: | chr9:32970680-32971109 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 230-800 |
| Cow position: | chr9:16855383-16855949 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 142 |
| Conread position: | 230-809 |
| Cow position: | chr9:17101448-17100867 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 157 |
| Conread position: | 307-798 |
| Cow position: | chr9:64013532-64013040 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 66 |
| Conread position: | 307-802 |
| Cow position: | chr9:10938429-10938911 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 168 |
| Conread position: | 307-803 |
| Cow position: | chr9:44204372-44203883 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 118 |
| Conread position: | 353-832 |
| Cow position: | chr9:17313260-17313714 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 178 |
| Conread position: | 391-809 |
| Cow position: | chr9:5535432-5535021 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 133 |
| Conread position: | 394-803 |
| Cow position: | chr9:20940205-20940608 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 248 |
| Conread position: | 398-800 |
| Cow position: | chr9:29043751-29043382 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 172, 126 |
| Conread position: | 401-802 |
| Cow position: | chr9:56266723-56266321 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 129, 20 |
| Conread position: | 401-803 |
| Cow position: | chr9:6251053-6251448 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 231 |
| Conread position: | 401-809 |
| Cow position: | chr9:6884124-6884524 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 53 |
| Conread position: | 404-803 |
| Cow position: | chr9:35707373-35707762 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 123, 233 |
| Conread position: | 440-799 |
| Cow position: | chr9:48796468-48796111 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 200 |
| Conread position: | 444-803 |
| Cow position: | chr9:50064092-50063744 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 62 |
| Conread position: | 483-799 |
| Cow position: | chr9:24423077-24422767 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 42, 173 |
| Conread position: | 483-832 |
| Cow position: | chr9:1729431-1729097 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 40, 176 |
| Conread position: | 486-832 |
| Cow position: | chr9:2807480-2807147 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 39, 155 |
| Conread position: | 525-799 |
| Cow position: | chr9:2607560-2607825 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 42, 99 |
| Conread position: | 525-832 |
| Cow position: | chr9:19157363-19157070 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 551-797 |
| Cow position: | chr9:6300533-6300767 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 19, 90 |
| Conread position: | 552-832 |
| Cow position: | chr9:27037059-27037321 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 90 |
| Conread position: | 564-799 |
| Cow position: | chr9:6709101-6708874 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 91, 71 |
| Conread position: | 573-832 |
| Cow position: | chr9:45897724-45897964 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 160, 77 |
| Conread position: | 589-809 |
| Cow position: | chr9:10856009-10856214 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 141, 46 |
| Conread position: | 642-799 |
| Cow position: | chr9:37174831-37174986 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 660-832 |
| Cow position: | chr9:29024987-29024822 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 675-799 |
| Cow position: | chr9:4941430-4941308 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 679-802 |
| Cow position: | chr9:1741772-1741651 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 15 |
Show alignments to all cow chromosomes.