Cow genome map
| Conread name: | Pig4-TMW8026F11 |
| Conread position: | 96-499 |
| Cow position: | chr1:52487546-52487951 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 304, 346 |
| Conread position: | 259-484 |
| Cow position: | chr1:60045257-60045029 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 96 |
| Conread position: | 275-470 |
| Cow position: | chr1:12090594-12090402 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 88, 21 |
| Conread position: | 276-499 |
| Cow position: | chr1:4582803-4582580 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 277-499 |
| Cow position: | chr1:48581367-48581158 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 139, 9 |
| Conread position: | 279-499 |
| Cow position: | chr1:38706594-38706825 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 54, 147 |
| Conread position: | 280-486 |
| Cow position: | chr1:102266022-102266226 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 281-492 |
| Cow position: | chr1:25956153-25955931 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 282-473 |
| Cow position: | chr1:95828880-95829078 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 36 |
| Conread position: | 284-493 |
| Cow position: | chr1:62852478-62852690 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 286-482 |
| Cow position: | chr1:29935142-29935342 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 46 |
| Conread position: | 288-470 |
| Cow position: | chr1:39095736-39095546 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 11, 116 |
| Conread position: | 288-499 |
| Cow position: | chr1:34160076-34159864 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 290-484 |
| Cow position: | chr1:196758-196961 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 19, 130 |
| Conread position: | 293-473 |
| Cow position: | chr1:86110499-86110689 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 293-495 |
| Cow position: | chr1:84787503-84787303 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 130, 14 |
| Conread position: | 295-486 |
| Cow position: | chr1:43311531-43311730 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 295-499 |
| Cow position: | chr1:67529301-67529084 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 296-497 |
| Cow position: | chr1:38419264-38419054 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 30 |
| Conread position: | 297-498 |
| Cow position: | chr1:32014427-32014226 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 297-498 |
| Cow position: | chr1:84103830-84104031 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 100, 30 |
| Conread position: | 300-478 |
| Cow position: | chr1:81615886-81615704 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 300-494 |
| Cow position: | chr1:41022654-41022453 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 111 |
| Conread position: | 303-497 |
| Cow position: | chr1:53623180-53622987 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 50 |
| Conread position: | 304-499 |
| Cow position: | chr1:7748448-7748242 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 304-499 |
| Cow position: | chr1:7752612-7752408 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 304-501 |
| Cow position: | chr1:11913650-11913851 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 28 |
| Conread position: | 306-498 |
| Cow position: | chr1:97611441-97611631 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 310-483 |
| Cow position: | chr1:56225694-56225514 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 17, 92 |
| Conread position: | 310-498 |
| Cow position: | chr1:82880858-82880675 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 64 |
| Conread position: | 310-499 |
| Cow position: | chr1:22461020-22461209 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 311-484 |
| Cow position: | chr1:98556892-98557075 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 312-493 |
| Cow position: | chr1:78857111-78857294 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 312-499 |
| Cow position: | chr1:36688155-36688349 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 131 |
| Conread position: | 312-499 |
| Cow position: | chr1:95153101-95152900 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 313-484 |
| Cow position: | chr1:93590367-93590542 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 313-493 |
| Cow position: | chr1:45449517-45449337 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 313-499 |
| Cow position: | chr1:15875883-15875689 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 313-499 |
| Cow position: | chr1:89297884-89298081 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 313-499 |
| Cow position: | chr1:89301493-89301690 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 313-499 |
| Cow position: | chr1:96081703-96081509 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 150 |
| Conread position: | 314-467 |
| Cow position: | chr1:84238897-84239062 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 314-479 |
| Cow position: | chr1:102768400-102768226 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 314-484 |
| Cow position: | chr1:91065935-91066107 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 314-491 |
| Cow position: | chr1:13414246-13414060 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 69 |
| Conread position: | 314-492 |
| Cow position: | chr1:96599077-96599256 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 117 |
| Conread position: | 314-493 |
| Cow position: | chr1:42292141-42291960 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 314-493 |
| Cow position: | chr1:82917259-82917440 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 314-493 |
| Cow position: | chr1:101855806-101855988 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 314-495 |
| Cow position: | chr1:101835039-101834848 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 314-497 |
| Cow position: | chr1:45873858-45874039 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 61, 34 |
| Conread position: | 314-498 |
| Cow position: | chr1:46031185-46030989 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 130 |
| Conread position: | 314-499 |
| Cow position: | chr1:53403003-53402810 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 314-500 |
| Cow position: | chr1:101632130-101632308 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 112, 18 |
| Conread position: | 314-503 |
| Cow position: | chr1:40078013-40077819 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 104 |
| Conread position: | 314-504 |
| Cow position: | chr1:70416536-70416736 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 103 |
| Conread position: | 316-465 |
| Cow position: | chr1:186061-186218 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 316-499 |
| Cow position: | chr1:42797094-42796906 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 316-499 |
| Cow position: | chr1:55428733-55428927 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 317-499 |
| Cow position: | chr1:39683922-39684115 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 141 |
| Conread position: | 317-499 |
| Cow position: | chr1:76518634-76518451 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 90, 26 |
| Conread position: | 318-470 |
| Cow position: | chr1:87220663-87220513 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 318-476 |
| Cow position: | chr1:1605922-1606084 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 318-490 |
| Cow position: | chr1:70483116-70483296 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 318-493 |
| Cow position: | chr1:36018565-36018748 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 318-498 |
| Cow position: | chr1:20667531-20667712 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 86 |
| Conread position: | 318-498 |
| Cow position: | chr1:88231547-88231735 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 318-499 |
| Cow position: | chr1:87095002-87095185 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 318-499 |
| Cow position: | chr1:101507568-101507389 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 107, 16 |
| Conread position: | 318-500 |
| Cow position: | chr1:10778773-10778592 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 46, 84 |
| Conread position: | 319-442 |
| Cow position: | chr1:49711064-49710941 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 92 |
| Conread position: | 320-482 |
| Cow position: | chr1:1956123-1956288 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 320-496 |
| Cow position: | chr1:18936630-18936805 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 320-501 |
| Cow position: | chr1:22231865-22231675 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 321-499 |
| Cow position: | chr1:33206657-33206852 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 322-480 |
| Cow position: | chr1:3666820-3666983 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 322-499 |
| Cow position: | chr1:54156519-54156705 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 42, 97 |
| Conread position: | 322-499 |
| Cow position: | chr1:73020449-73020633 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 322-499 |
| Cow position: | chr1:82505208-82505034 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 83, 106 |
| Conread position: | 323-492 |
| Cow position: | chr1:2462585-2462412 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 323-495 |
| Cow position: | chr1:50843641-50843819 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 327-478 |
| Cow position: | chr1:54645633-54645477 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 327-490 |
| Cow position: | chr1:102648490-102648316 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 327-493 |
| Cow position: | chr1:96932467-96932308 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 327-498 |
| Cow position: | chr1:63461088-63460908 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 327-499 |
| Cow position: | chr1:88360095-88359907 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 327-499 |
| Cow position: | chr1:100474449-100474263 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 327-503 |
| Cow position: | chr1:34771289-34771478 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 327-503 |
| Cow position: | chr1:100800558-100800744 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 328-486 |
| Cow position: | chr1:46172814-46172647 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 329-503 |
| Cow position: | chr1:22192978-22192794 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 71 |
| Conread position: | 332-493 |
| Cow position: | chr1:23332710-23332869 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 332-493 |
| Cow position: | chr1:101151754-101151592 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 332-498 |
| Cow position: | chr1:6031826-6031654 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 334-493 |
| Cow position: | chr1:75745063-75744897 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 334-495 |
| Cow position: | chr1:42868747-42868907 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 334-499 |
| Cow position: | chr1:32035511-32035681 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 334-499 |
| Cow position: | chr1:69694804-69694964 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 89, 59 |
| Conread position: | 334-503 |
| Cow position: | chr1:59675797-59675626 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 92, 130 |
| Conread position: | 335-486 |
| Cow position: | chr1:69411493-69411655 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 335-493 |
| Cow position: | chr1:97125122-97124964 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 70 |
| Conread position: | 335-496 |
| Cow position: | chr1:100513099-100512926 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 335-504 |
| Cow position: | chr1:1802367-1802191 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 336-493 |
| Cow position: | chr1:91810937-91810781 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 90, 66 |
| Conread position: | 336-499 |
| Cow position: | chr1:6381977-6381801 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 25, 126 |
| Conread position: | 336-499 |
| Cow position: | chr1:65318778-65318604 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 336-499 |
| Cow position: | chr1:73721565-73721389 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 336-501 |
| Cow position: | chr1:53521106-53520938 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 87, 60 |
| Conread position: | 337-491 |
| Cow position: | chr1:63212059-63212222 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 122 |
| Conread position: | 337-495 |
| Cow position: | chr1:55357089-55357262 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 337-496 |
| Cow position: | chr1:50930791-50930947 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 13 |
| Conread position: | 338-477 |
| Cow position: | chr1:51064963-51065102 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 338-499 |
| Cow position: | chr1:72813817-72813645 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 338-499 |
| Cow position: | chr1:83606257-83606421 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 343-498 |
| Cow position: | chr1:81638733-81638577 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 346-493 |
| Cow position: | chr1:100376005-100375857 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 350-496 |
| Cow position: | chr1:24534083-24534225 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 76, 47 |
| Conread position: | 355-490 |
| Cow position: | chr1:40160541-40160677 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 358-493 |
| Cow position: | chr1:93385246-93385110 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 360-481 |
| Cow position: | chr1:99629330-99629211 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 360-495 |
| Cow position: | chr1:15334056-15333924 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 360-495 |
| Cow position: | chr1:82337613-82337747 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 66, 50 |
| Conread position: | 360-499 |
| Cow position: | chr1:11729339-11729204 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 360-499 |
| Cow position: | chr1:23373029-23372888 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 57 |
| Conread position: | 360-499 |
| Cow position: | chr1:31630115-31630258 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 360-499 |
| Cow position: | chr1:38277858-38277999 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 360-499 |
| Cow position: | chr1:49433093-49433235 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 360-499 |
| Cow position: | chr1:54258737-54258596 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 103 |
| Conread position: | 360-499 |
| Cow position: | chr1:54569869-54569727 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 360-499 |
| Cow position: | chr1:70146740-70146882 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 360-499 |
| Cow position: | chr1:92996718-92996862 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 360-499 |
| Cow position: | chr1:99642201-99642340 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 62, 51 |
| Conread position: | 360-500 |
| Cow position: | chr1:2972088-2971945 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 360-504 |
| Cow position: | chr1:61011343-61011205 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 360-558 |
| Cow position: | chr1:47886312-47886508 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 361-497 |
| Cow position: | chr1:6941633-6941499 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 39 |
| Conread position: | 361-497 |
| Cow position: | chr1:22730900-22730765 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 361-523 |
| Cow position: | chr1:6959046-6958886 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 39 |
| Conread position: | 371-484 |
| Cow position: | chr1:17196468-17196583 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 371-487 |
| Cow position: | chr1:101280580-101280697 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 371-499 |
| Cow position: | chr1:73494434-73494567 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 389-494 |
| Cow position: | chr1:68672462-68672568 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 389-499 |
| Cow position: | chr1:65909650-65909540 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 389-503 |
| Cow position: | chr1:99024091-99024206 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 391-499 |
| Cow position: | chr1:84768741-84768850 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 391-502 |
| Cow position: | chr1:78697635-78697746 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 394-499 |
| Cow position: | chr1:54157431-54157325 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.