Cow genome map
| Conread name: | Pig4-TMW8026F11 |
| Conread position: | 253-499 |
| Cow position: | chr14:16256542-16256778 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 173, 13 |
| Conread position: | 265-484 |
| Cow position: | chr14:27608956-27609175 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 47 |
| Conread position: | 265-493 |
| Cow position: | chr14:3923690-3923921 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 280-483 |
| Cow position: | chr14:36151116-36151328 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 282-503 |
| Cow position: | chr14:8036123-8036347 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 284-484 |
| Cow position: | chr14:20010714-20010501 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 284-492 |
| Cow position: | chr14:38747488-38747690 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 286-493 |
| Cow position: | chr14:24880803-24880592 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 22, 123 |
| Conread position: | 287-493 |
| Cow position: | chr14:1859797-1859605 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 288-496 |
| Cow position: | chr14:38920758-38920968 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 299-499 |
| Cow position: | chr14:37152125-37151921 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 106 |
| Conread position: | 302-499 |
| Cow position: | chr14:8083012-8083217 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 308-499 |
| Cow position: | chr14:24785478-24785677 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 104 |
| Conread position: | 310-494 |
| Cow position: | chr14:4282689-4282490 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 311-499 |
| Cow position: | chr14:27652982-27653183 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 312-484 |
| Cow position: | chr14:4848172-4848352 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 312-493 |
| Cow position: | chr14:46032046-46032224 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 313-496 |
| Cow position: | chr14:43192688-43192860 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 313-504 |
| Cow position: | chr14:47200311-47200100 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 314-499 |
| Cow position: | chr14:20245336-20245150 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 84 |
| Conread position: | 314-499 |
| Cow position: | chr14:27303481-27303677 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 314-503 |
| Cow position: | chr14:13809779-13809963 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 112, 47 |
| Conread position: | 315-495 |
| Cow position: | chr14:11056907-11056714 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 315-499 |
| Cow position: | chr14:23419619-23419817 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 318-459 |
| Cow position: | chr14:42633199-42633332 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 318-491 |
| Cow position: | chr14:14466621-14466444 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 318-493 |
| Cow position: | chr14:31893417-31893593 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 127 |
| Conread position: | 318-493 |
| Cow position: | chr14:38458431-38458607 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 318-499 |
| Cow position: | chr14:19618913-19618732 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 80, 16 |
| Conread position: | 318-499 |
| Cow position: | chr14:40230806-40230616 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 319-479 |
| Cow position: | chr14:20234362-20234194 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 319-484 |
| Cow position: | chr14:41156890-41156720 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 319-496 |
| Cow position: | chr14:21357387-21357574 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 320-484 |
| Cow position: | chr14:32784285-32784111 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 15 |
| Conread position: | 320-499 |
| Cow position: | chr14:13385200-13385387 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 321-484 |
| Cow position: | chr14:40952104-40952275 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 321-499 |
| Cow position: | chr14:18270195-18270380 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 321-499 |
| Cow position: | chr14:27823267-27823451 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 321-499 |
| Cow position: | chr14:44713251-44713438 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 321-504 |
| Cow position: | chr14:30023365-30023173 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 322-496 |
| Cow position: | chr14:10721868-10721690 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 322-499 |
| Cow position: | chr14:5959159-5958964 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 324-501 |
| Cow position: | chr14:24387287-24387462 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 10 |
| Conread position: | 332-484 |
| Cow position: | chr14:10693403-10693250 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 334-484 |
| Cow position: | chr14:25912499-25912655 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 72 |
| Conread position: | 334-493 |
| Cow position: | chr14:6595472-6595632 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 334-493 |
| Cow position: | chr14:11917013-11917170 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 334-493 |
| Cow position: | chr14:44067341-44067499 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 31, 42 |
| Conread position: | 335-494 |
| Cow position: | chr14:24981299-24981474 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 336-499 |
| Cow position: | chr14:1796044-1796210 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 28, 100 |
| Conread position: | 337-478 |
| Cow position: | chr14:20466784-20466935 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 337-495 |
| Cow position: | chr14:37447611-37447448 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 337-499 |
| Cow position: | chr14:23078933-23078773 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 95, 11 |
| Conread position: | 338-493 |
| Cow position: | chr14:42153548-42153391 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 345-483 |
| Cow position: | chr14:37479234-37479363 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 50 |
| Conread position: | 360-494 |
| Cow position: | chr14:13516112-13515973 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 360-499 |
| Cow position: | chr14:35381469-35381609 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 360-499 |
| Cow position: | chr14:38144230-38144088 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 360-500 |
| Cow position: | chr14:18412714-18412571 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 360-501 |
| Cow position: | chr14:21593122-21592983 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 48 |
| Conread position: | 360-503 |
| Cow position: | chr14:24806476-24806620 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 371-478 |
| Cow position: | chr14:21530185-21530075 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 389-499 |
| Cow position: | chr14:25073033-25073144 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 389-499 |
| Cow position: | chr14:42436933-42437044 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.