Cow genome map

Conread name: Pig4-TMW8026F11

Conread position: 165-499
Cow position: chr16:18429947-18429611 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 10

Conread position: 275-483
Cow position: chr16:45193548-45193769 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 114

Conread position: 281-493
Cow position: chr16:23721801-23722013 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 48, 23

Conread position: 284-487
Cow position: chr16:42107877-42107665 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 285-493
Cow position: chr16:31626045-31626254 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 44, 14

Conread position: 285-501
Cow position: chr16:27326877-27327103 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 46

Conread position: 288-498
Cow position: chr16:50453997-50453783 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 145

Conread position: 289-495
Cow position: chr16:26069983-26069778 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 46

Conread position: 289-499
Cow position: chr16:14343810-14343603 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 19

Conread position: 291-483
Cow position: chr16:44138249-44138453 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 53

Conread position: 292-497
Cow position: chr16:8522149-8522363 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 31, 190

Conread position: 293-493
Cow position: chr16:3775969-3775759 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 19

Conread position: 296-477
Cow position: chr16:21974724-21974918 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 36

Conread position: 296-493
Cow position: chr16:53406617-53406414 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 296-499
Cow position: chr16:56082124-56082341 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 297-491
Cow position: chr16:31149611-31149411 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 116

Conread position: 297-494
Cow position: chr16:45943527-45943737 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 297-499
Cow position: chr16:13306633-13306848 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 297-499
Cow position: chr16:30211685-30211478 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 110

Conread position: 299-493
Cow position: chr16:45233584-45233392 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 7

Conread position: 299-499
Cow position: chr16:38243438-38243639 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 51

Conread position: 299-500
Cow position: chr16:56912455-56912664 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 190

Conread position: 300-499
Cow position: chr16:44394509-44394304 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 51

Conread position: 306-499
Cow position: chr16:43308339-43308537 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 58, 138

Conread position: 308-493
Cow position: chr16:20252994-20253180 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 21, 0

Conread position: 308-497
Cow position: chr16:18353731-18353932 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 26

Conread position: 309-499
Cow position: chr16:56670689-56670895 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 5

Conread position: 310-504
Cow position: chr16:39165447-39165258 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 43

Conread position: 312-484
Cow position: chr16:4856890-4857063 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 14

Conread position: 312-489
Cow position: chr16:6266134-6266310 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 312-496
Cow position: chr16:22738491-22738300 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 26, 120

Conread position: 314-484
Cow position: chr16:7665857-7665676 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 25

Conread position: 314-484
Cow position: chr16:11053973-11053799 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 314-491
Cow position: chr16:56565803-56565628 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 111, 13

Conread position: 314-499
Cow position: chr16:23472961-23472773 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 83

Conread position: 314-500
Cow position: chr16:28199236-28199051 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 37

Conread position: 314-501
Cow position: chr16:21657375-21657185 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 92

Conread position: 316-486
Cow position: chr16:19402549-19402725 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 17

Conread position: 316-495
Cow position: chr16:16968495-16968674 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 12

Conread position: 316-499
Cow position: chr16:11083212-11083022 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 101

Conread position: 317-455
Cow position: chr16:21027375-21027237 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 106, 85

Conread position: 317-497
Cow position: chr16:30646726-30646538 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 94

Conread position: 317-499
Cow position: chr16:41530093-41530276 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 67

Conread position: 317-501
Cow position: chr16:36922533-36922717 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 108, 83

Conread position: 318-456
Cow position: chr16:23344568-23344706 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 105

Conread position: 318-498
Cow position: chr16:13995984-13996172 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 14

Conread position: 318-499
Cow position: chr16:46548048-46548245 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 318-499
Cow position: chr16:50282221-50282408 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 74

Conread position: 318-499
Cow position: chr16:50286717-50286536 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 33

Conread position: 319-499
Cow position: chr16:7496462-7496280 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 76

Conread position: 319-499
Cow position: chr16:14841581-14841383 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 320-499
Cow position: chr16:4102630-4102807 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 46

Conread position: 320-499
Cow position: chr16:18572846-18573030 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 44, 10

Conread position: 321-494
Cow position: chr16:8448452-8448626 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 22

Conread position: 322-493
Cow position: chr16:22380152-22380323 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 76

Conread position: 322-493
Cow position: chr16:25657308-25657132 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 8

Conread position: 322-494
Cow position: chr16:18156370-18156178 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 322-499
Cow position: chr16:28233098-28233281 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 8

Conread position: 323-454
Cow position: chr16:319252-319119 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 7

Conread position: 323-470
Cow position: chr16:9127014-9126863 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 92

Conread position: 325-484
Cow position: chr16:8205875-8206045 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 63

Conread position: 326-497
Cow position: chr16:46552997-46552819 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 10

Conread position: 326-499
Cow position: chr16:33405295-33405469 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 32

Conread position: 326-499
Cow position: chr16:50569466-50569287 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 86

Conread position: 327-499
Cow position: chr16:13712737-13712909 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 75

Conread position: 327-499
Cow position: chr16:42444365-42444180 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 327-499
Cow position: chr16:51144004-51143823 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 78

Conread position: 332-491
Cow position: chr16:23187738-23187576 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 69

Conread position: 333-498
Cow position: chr16:12077282-12077462 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 334-483
Cow position: chr16:6547670-6547820 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 334-484
Cow position: chr16:9985204-9985354 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 39, 70

Conread position: 334-484
Cow position: chr16:21369992-21370151 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 334-493
Cow position: chr16:10809629-10809469 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 334-493
Cow position: chr16:16163515-16163676 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 334-499
Cow position: chr16:23955633-23955808 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 334-499
Cow position: chr16:49229576-49229744 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 28, 98

Conread position: 336-484
Cow position: chr16:25839807-25839659 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 40

Conread position: 336-494
Cow position: chr16:19053695-19053854 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 337-480
Cow position: chr16:46184345-46184200 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 72, 24

Conread position: 337-499
Cow position: chr16:22327705-22327534 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 340-499
Cow position: chr16:15905052-15905226 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 360-483
Cow position: chr16:49860397-49860277 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 360-484
Cow position: chr16:12220849-12220720 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 360-486
Cow position: chr16:27759437-27759569 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 360-490
Cow position: chr16:29060547-29060410 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 360-498
Cow position: chr16:31241129-31241269 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 360-499
Cow position: chr16:4910359-4910501 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 360-499
Cow position: chr16:11957415-11957554 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 48

Conread position: 360-499
Cow position: chr16:38355271-38355405 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 28

Conread position: 360-499
Cow position: chr16:50289314-50289176 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 361-484
Cow position: chr16:7812855-7812729 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 361-499
Cow position: chr16:7928220-7928361 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 362-499
Cow position: chr16:820412-820274 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 35

Conread position: 362-499
Cow position: chr16:9958990-9958853 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 48

Conread position: 379-502
Cow position: chr16:19712344-19712466 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 18

Conread position: 389-498
Cow position: chr16:12097776-12097666 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 389-504
Cow position: chr16:53086205-53086322 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.