Cow genome map
| Conread name: | Pig4-TMW8026F11 |
| Conread position: | 228-482 |
| Cow position: | chr19:19174813-19174547 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 48, 91 |
| Conread position: | 272-499 |
| Cow position: | chr19:52750508-52750746 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 281-494 |
| Cow position: | chr19:18034900-18035117 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 83 |
| Conread position: | 284-474 |
| Cow position: | chr19:37109374-37109566 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 285-494 |
| Cow position: | chr19:32666939-32666738 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 285-499 |
| Cow position: | chr19:26167686-26167900 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 289-483 |
| Cow position: | chr19:13121056-13121255 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 70, 48 |
| Conread position: | 294-478 |
| Cow position: | chr19:38910544-38910734 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 43 |
| Conread position: | 294-499 |
| Cow position: | chr19:3857684-3857894 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 82 |
| Conread position: | 298-499 |
| Cow position: | chr19:21176527-21176729 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 62, 32 |
| Conread position: | 299-483 |
| Cow position: | chr19:39795404-39795218 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 104 |
| Conread position: | 300-503 |
| Cow position: | chr19:17260129-17259915 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 303-500 |
| Cow position: | chr19:53378915-53378714 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 14 |
| Conread position: | 305-484 |
| Cow position: | chr19:30917723-30917917 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 306-484 |
| Cow position: | chr19:4485930-4486123 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 307-499 |
| Cow position: | chr19:39758733-39758535 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 308-499 |
| Cow position: | chr19:12760893-12761091 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 310-440 |
| Cow position: | chr19:12948844-12948976 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 310-499 |
| Cow position: | chr19:52356463-52356264 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 312-484 |
| Cow position: | chr19:27968486-27968669 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 312-499 |
| Cow position: | chr19:51285844-51285652 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 314-493 |
| Cow position: | chr19:418027-417848 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 20 |
| Conread position: | 314-495 |
| Cow position: | chr19:11211070-11211266 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 316-475 |
| Cow position: | chr19:27105195-27105044 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 316-495 |
| Cow position: | chr19:11191427-11191604 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 316-498 |
| Cow position: | chr19:30471151-30471341 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 317-484 |
| Cow position: | chr19:6417811-6417636 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 47, 82 |
| Conread position: | 318-486 |
| Cow position: | chr19:49683661-49683840 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 318-490 |
| Cow position: | chr19:55999314-55999141 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 318-493 |
| Cow position: | chr19:17068275-17068107 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 12 |
| Conread position: | 318-499 |
| Cow position: | chr19:10970906-10971085 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 108, 46 |
| Conread position: | 318-499 |
| Cow position: | chr19:11816522-11816711 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 318-499 |
| Cow position: | chr19:17355061-17354870 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 125 |
| Conread position: | 318-499 |
| Cow position: | chr19:23304288-23304478 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 318-499 |
| Cow position: | chr19:36845447-36845262 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 318-503 |
| Cow position: | chr19:46822912-46822718 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 135 |
| Conread position: | 319-499 |
| Cow position: | chr19:8185408-8185215 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 320-499 |
| Cow position: | chr19:39384847-39385029 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 320-503 |
| Cow position: | chr19:16870579-16870768 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 321-495 |
| Cow position: | chr19:12747579-12747760 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 321-499 |
| Cow position: | chr19:41695474-41695649 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 101, 44 |
| Conread position: | 321-501 |
| Cow position: | chr19:40051199-40051383 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 321-507 |
| Cow position: | chr19:51031385-51031579 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 321-509 |
| Cow position: | chr19:14588601-14588404 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 322-495 |
| Cow position: | chr19:24956046-24956225 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 8 |
| Conread position: | 323-499 |
| Cow position: | chr19:30007382-30007204 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 117 |
| Conread position: | 323-504 |
| Cow position: | chr19:47987042-47986866 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 102, 7 |
| Conread position: | 324-495 |
| Cow position: | chr19:729552-729730 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 324-499 |
| Cow position: | chr19:39254253-39254433 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 327-495 |
| Cow position: | chr19:31768441-31768614 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 334-479 |
| Cow position: | chr19:49290272-49290425 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 27, 80 |
| Conread position: | 334-484 |
| Cow position: | chr19:41347554-41347402 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 334-493 |
| Cow position: | chr19:1033401-1033243 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 88, 113 |
| Conread position: | 334-497 |
| Cow position: | chr19:1553895-1553722 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 130 |
| Conread position: | 334-499 |
| Cow position: | chr19:12698503-12698331 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 336-470 |
| Cow position: | chr19:47772750-47772887 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 336-494 |
| Cow position: | chr19:10242744-10242595 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 153, 50 |
| Conread position: | 336-495 |
| Cow position: | chr19:34166552-34166383 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 336-499 |
| Cow position: | chr19:43373232-43373051 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 336-506 |
| Cow position: | chr19:51637229-51637044 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 337-499 |
| Cow position: | chr19:14581532-14581375 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 89, 13 |
| Conread position: | 338-493 |
| Cow position: | chr19:40658307-40658458 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 20 |
| Conread position: | 338-497 |
| Cow position: | chr19:6280664-6280504 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 88, 61 |
| Conread position: | 339-497 |
| Cow position: | chr19:42515525-42515362 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 340-495 |
| Cow position: | chr19:15091965-15092120 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 359-499 |
| Cow position: | chr19:25526431-25526296 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 29 |
| Conread position: | 360-484 |
| Cow position: | chr19:35072900-35073026 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 360-494 |
| Cow position: | chr19:41585123-41584987 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 360-495 |
| Cow position: | chr19:12469663-12469794 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 360-496 |
| Cow position: | chr19:34608048-34608185 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 360-499 |
| Cow position: | chr19:5522007-5522143 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 360-499 |
| Cow position: | chr19:30227674-30227532 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 360-499 |
| Cow position: | chr19:31652712-31652570 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 360-499 |
| Cow position: | chr19:44757329-44757468 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 127 |
| Conread position: | 360-503 |
| Cow position: | chr19:54157584-54157729 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 360-504 |
| Cow position: | chr19:53073008-53073155 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 360-550 |
| Cow position: | chr19:18984306-18984097 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 361-492 |
| Cow position: | chr19:43560745-43560612 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 379-486 |
| Cow position: | chr19:22167083-22167193 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 390-499 |
| Cow position: | chr19:33237296-33237186 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.