Cow genome map
| Conread name: | Pig4-TMW8026F11 |
| Conread position: | 5-169 |
| Cow position: | chr24:10308995-10308836 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 280-493 |
| Cow position: | chr24:11595221-11595429 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 282-499 |
| Cow position: | chr24:43499885-43499657 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 292-484 |
| Cow position: | chr24:18484775-18484980 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 296-499 |
| Cow position: | chr24:12200192-12200410 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 296-499 |
| Cow position: | chr24:17689402-17689612 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 16 |
| Conread position: | 300-504 |
| Cow position: | chr24:11840390-11840181 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 300-504 |
| Cow position: | chr24:27149591-27149377 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 301-499 |
| Cow position: | chr24:11028482-11028690 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 306-483 |
| Cow position: | chr24:22129443-22129623 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 58, 101 |
| Conread position: | 307-502 |
| Cow position: | chr24:6103029-6102822 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 312-476 |
| Cow position: | chr24:14587967-14587801 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 312-499 |
| Cow position: | chr24:28690881-28690684 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 181 |
| Conread position: | 312-499 |
| Cow position: | chr24:36286760-36286568 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 314-440 |
| Cow position: | chr24:32054840-32054705 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 314-480 |
| Cow position: | chr24:27719337-27719509 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 314-494 |
| Cow position: | chr24:7777450-7777624 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 314-495 |
| Cow position: | chr24:31383301-31383119 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 48, 92 |
| Conread position: | 314-497 |
| Cow position: | chr24:16089423-16089229 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 316-482 |
| Cow position: | chr24:34301845-34302023 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 37 |
| Conread position: | 316-486 |
| Cow position: | chr24:230473-230295 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 87 |
| Conread position: | 316-499 |
| Cow position: | chr24:26848551-26848734 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 317-483 |
| Cow position: | chr24:34768385-34768553 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 317-499 |
| Cow position: | chr24:3494061-3493883 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 317-499 |
| Cow position: | chr24:28024457-28024278 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 318-475 |
| Cow position: | chr24:25482433-25482277 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 13, 41 |
| Conread position: | 318-497 |
| Cow position: | chr24:39960821-39960997 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 106, 15 |
| Conread position: | 318-498 |
| Cow position: | chr24:39523261-39523449 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 318-499 |
| Cow position: | chr24:10300263-10300075 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 318-499 |
| Cow position: | chr24:25970896-25971075 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 318-503 |
| Cow position: | chr24:250348-250543 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 319-468 |
| Cow position: | chr24:43027037-43027197 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 319-492 |
| Cow position: | chr24:6151965-6151791 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 320-479 |
| Cow position: | chr24:38006535-38006699 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 320-484 |
| Cow position: | chr24:19187109-19186951 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 320-499 |
| Cow position: | chr24:44040835-44041006 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 320-503 |
| Cow position: | chr24:18750896-18750702 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 321-498 |
| Cow position: | chr24:17955279-17955443 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 43 |
| Conread position: | 321-498 |
| Cow position: | chr24:37252342-37252156 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 321-509 |
| Cow position: | chr24:2992692-2992896 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 125 |
| Conread position: | 322-502 |
| Cow position: | chr24:27810333-27810153 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 323-492 |
| Cow position: | chr24:34390456-34390282 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 323-499 |
| Cow position: | chr24:5152709-5152522 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 324-480 |
| Cow position: | chr24:12121082-12120914 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 325-499 |
| Cow position: | chr24:17104391-17104571 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 326-478 |
| Cow position: | chr24:13610482-13610328 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 50 |
| Conread position: | 327-484 |
| Cow position: | chr24:27202249-27202102 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 99, 7 |
| Conread position: | 328-499 |
| Cow position: | chr24:27553279-27553094 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 36, 140 |
| Conread position: | 328-499 |
| Cow position: | chr24:34742929-34742752 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 333-499 |
| Cow position: | chr24:33944580-33944400 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 334-485 |
| Cow position: | chr24:35217560-35217407 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 334-493 |
| Cow position: | chr24:15340292-15340450 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 334-504 |
| Cow position: | chr24:28355531-28355700 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 152, 69 |
| Conread position: | 336-479 |
| Cow position: | chr24:28553401-28553545 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 336-490 |
| Cow position: | chr24:17832658-17832813 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 336-495 |
| Cow position: | chr24:23000172-23000016 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 41 |
| Conread position: | 336-499 |
| Cow position: | chr24:39218381-39218553 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 336-499 |
| Cow position: | chr24:41406065-41405893 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 360-477 |
| Cow position: | chr24:33098334-33098452 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 360-480 |
| Cow position: | chr24:36554563-36554680 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 41 |
| Conread position: | 360-484 |
| Cow position: | chr24:18810972-18810845 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 360-484 |
| Cow position: | chr24:22420101-22419974 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 360-484 |
| Cow position: | chr24:31816715-31816592 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 360-495 |
| Cow position: | chr24:41565962-41566096 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 93 |
| Conread position: | 360-499 |
| Cow position: | chr24:9300768-9300626 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 360-499 |
| Cow position: | chr24:18741427-18741573 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 360-499 |
| Cow position: | chr24:32890909-32891045 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 66, 41 |
| Conread position: | 360-503 |
| Cow position: | chr24:16510110-16509972 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 371-499 |
| Cow position: | chr24:19465788-19465918 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 389-498 |
| Cow position: | chr24:18313823-18313933 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.