Cow genome map
| Conread name: | Pig4-TMW8026F11 |
| Conread position: | 254-493 |
| Cow position: | chr29:10846800-10847038 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 267-490 |
| Cow position: | chr29:11050920-11050695 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 284-476 |
| Cow position: | chr29:3192670-3192871 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 288-493 |
| Cow position: | chr29:27487420-27487213 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 114, 48 |
| Conread position: | 292-499 |
| Cow position: | chr29:8798776-8798994 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 296-490 |
| Cow position: | chr29:2219610-2219417 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 130, 54 |
| Conread position: | 296-494 |
| Cow position: | chr29:13028684-13028466 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 296-499 |
| Cow position: | chr29:1933342-1933550 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 299-499 |
| Cow position: | chr29:5046884-5046674 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 36 |
| Conread position: | 301-459 |
| Cow position: | chr29:1992265-1992425 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 303-495 |
| Cow position: | chr29:27042498-27042297 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 304-486 |
| Cow position: | chr29:6636306-6636113 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 28, 113 |
| Conread position: | 308-484 |
| Cow position: | chr29:12025266-12025437 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 115, 22 |
| Conread position: | 310-491 |
| Cow position: | chr29:30294649-30294844 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 313-484 |
| Cow position: | chr29:28420974-28420791 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 314-481 |
| Cow position: | chr29:25432668-25432492 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 314-482 |
| Cow position: | chr29:18605452-18605622 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 76, 127 |
| Conread position: | 314-484 |
| Cow position: | chr29:936419-936243 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 316-495 |
| Cow position: | chr29:28775263-28775438 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 111, 11 |
| Conread position: | 316-499 |
| Cow position: | chr29:16200259-16200457 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 316-499 |
| Cow position: | chr29:17297342-17297157 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 316-499 |
| Cow position: | chr29:26631263-26631062 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 318-484 |
| Cow position: | chr29:7414705-7414537 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 318-493 |
| Cow position: | chr29:43313411-43313235 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 141 |
| Conread position: | 318-499 |
| Cow position: | chr29:26211265-26211073 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 318-499 |
| Cow position: | chr29:31934588-31934400 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 81 |
| Conread position: | 318-500 |
| Cow position: | chr29:4440994-4441184 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 319-492 |
| Cow position: | chr29:396613-396434 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 322-492 |
| Cow position: | chr29:109878-109715 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 325-489 |
| Cow position: | chr29:40889483-40889648 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 327-483 |
| Cow position: | chr29:7040666-7040835 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 329-477 |
| Cow position: | chr29:36357329-36357169 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 332-492 |
| Cow position: | chr29:5064962-5064803 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 68 |
| Conread position: | 332-499 |
| Cow position: | chr29:24187865-24188044 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 334-484 |
| Cow position: | chr29:706779-706920 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 334-484 |
| Cow position: | chr29:17110149-17109993 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 334-493 |
| Cow position: | chr29:21542053-21542211 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 66 |
| Conread position: | 334-493 |
| Cow position: | chr29:42792311-42792153 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 334-495 |
| Cow position: | chr29:28979320-28979477 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 334-499 |
| Cow position: | chr29:19187222-19187047 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 336-490 |
| Cow position: | chr29:29645130-29645292 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 336-492 |
| Cow position: | chr29:40583979-40583814 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 47 |
| Conread position: | 338-484 |
| Cow position: | chr29:13091284-13091431 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 140 |
| Conread position: | 339-499 |
| Cow position: | chr29:40916989-40916828 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 137 |
| Conread position: | 340-499 |
| Cow position: | chr29:21443151-21443317 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 345-484 |
| Cow position: | chr29:13639184-13639330 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 360-473 |
| Cow position: | chr29:7143460-7143342 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 360-484 |
| Cow position: | chr29:28257303-28257177 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 360-495 |
| Cow position: | chr29:29057337-29057200 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 360-499 |
| Cow position: | chr29:5520323-5520464 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 360-499 |
| Cow position: | chr29:15947330-15947188 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 360-499 |
| Cow position: | chr29:23142171-23142314 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 360-499 |
| Cow position: | chr29:34359665-34359800 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 360-499 |
| Cow position: | chr29:35677380-35677522 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 379-493 |
| Cow position: | chr29:17051866-17051981 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 379-494 |
| Cow position: | chr29:30455946-30455831 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 9 |
Show alignments to all cow chromosomes.