Cow genome map
| Conread name: | Pig4-TMW8026F11 | 
| Conread position: | 245-503 | 
| Cow position: | chr6:24491342-24491091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 8, 16 | 
| Conread position: | 274-499 | 
| Cow position: | chr6:43345141-43345379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 277-483 | 
| Cow position: | chr6:6067421-6067623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 7, 38 | 
| Conread position: | 278-499 | 
| Cow position: | chr6:67282172-67281957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 145, 6 | 
| Conread position: | 293-502 | 
| Cow position: | chr6:40032455-40032250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 29, 38 | 
| Conread position: | 296-484 | 
| Cow position: | chr6:15974265-15974446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 131, 18 | 
| Conread position: | 296-495 | 
| Cow position: | chr6:21466999-21467201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 5, 65 | 
| Conread position: | 296-499 | 
| Cow position: | chr6:23401723-23401929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 65, 16 | 
| Conread position: | 301-490 | 
| Cow position: | chr6:154744-154542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 24, 198 | 
| Conread position: | 301-493 | 
| Cow position: | chr6:16091166-16090972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 9e-26 | 
| Alignm gaps (pig, cow): | 72, 26 | 
| Conread position: | 301-499 | 
| Cow position: | chr6:16380809-16380607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 41, 9 | 
| Conread position: | 307-492 | 
| Cow position: | chr6:59101057-59101252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 52, 25 | 
| Conread position: | 312-470 | 
| Cow position: | chr6:58371004-58370842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 45, 20 | 
| Conread position: | 312-484 | 
| Cow position: | chr6:14150122-14150302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 312-493 | 
| Cow position: | chr6:67963801-67963987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 312-499 | 
| Cow position: | chr6:26408242-26408442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 312-501 | 
| Cow position: | chr6:17997057-17997258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 26, 186 | 
| Conread position: | 313-499 | 
| Cow position: | chr6:6060318-6060509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 50, 19 | 
| Conread position: | 313-499 | 
| Cow position: | chr6:16137509-16137709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 313-499 | 
| Cow position: | chr6:55044381-55044579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 20, 133 | 
| Conread position: | 314-496 | 
| Cow position: | chr6:36570713-36570526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 19, 37 | 
| Conread position: | 314-499 | 
| Cow position: | chr6:58304670-58304477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 22, 109 | 
| Conread position: | 315-463 | 
| Cow position: | chr6:30688264-30688413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 7, 16 | 
| Conread position: | 315-499 | 
| Cow position: | chr6:21535296-21535102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 315-502 | 
| Cow position: | chr6:55450180-55449993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 121, 21 | 
| Conread position: | 316-483 | 
| Cow position: | chr6:61523961-61524126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 46, 14 | 
| Conread position: | 316-499 | 
| Cow position: | chr6:37395160-37395338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 110, 16 | 
| Conread position: | 317-494 | 
| Cow position: | chr6:48436086-48435897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 317-496 | 
| Cow position: | chr6:2624012-2623839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 107, 83 | 
| Conread position: | 317-499 | 
| Cow position: | chr6:58697373-58697569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 317-499 | 
| Cow position: | chr6:59297298-59297115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 44, 19 | 
| Conread position: | 318-476 | 
| Cow position: | chr6:12648386-12648544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 104, 12 | 
| Conread position: | 318-478 | 
| Cow position: | chr6:7801146-7801313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 318-478 | 
| Cow position: | chr6:35341934-35342096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 46, 90 | 
| Conread position: | 318-483 | 
| Cow position: | chr6:51529937-51530109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 318-484 | 
| Cow position: | chr6:23696247-23696078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 46, 82 | 
| Conread position: | 318-490 | 
| Cow position: | chr6:38645982-38645812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 11, 83 | 
| Conread position: | 318-493 | 
| Cow position: | chr6:37129692-37129866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 11, 42 | 
| Conread position: | 318-494 | 
| Cow position: | chr6:15300587-15300766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 43, 75 | 
| Conread position: | 318-499 | 
| Cow position: | chr6:4469019-4468831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 46, 126 | 
| Conread position: | 318-499 | 
| Cow position: | chr6:47246035-47245843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 43, 172 | 
| Conread position: | 318-499 | 
| Cow position: | chr6:62437670-62437477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 318-503 | 
| Cow position: | chr6:5330666-5330471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 43, 15 | 
| Conread position: | 318-516 | 
| Cow position: | chr6:38640486-38640278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 12, 203 | 
| Conread position: | 319-499 | 
| Cow position: | chr6:15446942-15447135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 42, 10 | 
| Conread position: | 320-479 | 
| Cow position: | chr6:5095294-5095459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 42, 18 | 
| Conread position: | 320-482 | 
| Cow position: | chr6:44194305-44194470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 320-484 | 
| Cow position: | chr6:50504707-50504534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 42, 80 | 
| Conread position: | 320-499 | 
| Cow position: | chr6:8468907-8468728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 44, 18 | 
| Conread position: | 321-483 | 
| Cow position: | chr6:18447267-18447439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 43, 11 | 
| Conread position: | 322-504 | 
| Cow position: | chr6:15058613-15058434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 104, 28 | 
| Conread position: | 322-504 | 
| Cow position: | chr6:34569664-34569465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 38, 8 | 
| Conread position: | 323-499 | 
| Cow position: | chr6:1103498-1103676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 38, 11 | 
| Conread position: | 324-498 | 
| Cow position: | chr6:49686067-49685881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 324-503 | 
| Cow position: | chr6:18440231-18440419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 325-496 | 
| Cow position: | chr6:65259264-65259427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 156, 50 | 
| Conread position: | 327-499 | 
| Cow position: | chr6:1475581-1475408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 84, 39 | 
| Conread position: | 327-499 | 
| Cow position: | chr6:18144445-18144260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 327-509 | 
| Cow position: | chr6:53811830-53811633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 330-499 | 
| Cow position: | chr6:15243080-15242899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 334-448 | 
| Cow position: | chr6:19324711-19324829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 334-470 | 
| Cow position: | chr6:40761485-40761336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 334-476 | 
| Cow position: | chr6:57545992-57546143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 334-478 | 
| Cow position: | chr6:3937024-3936866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 334-482 | 
| Cow position: | chr6:14436507-14436646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 89, 59 | 
| Conread position: | 334-493 | 
| Cow position: | chr6:19455487-19455326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 334-495 | 
| Cow position: | chr6:36891883-36891718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 334-501 | 
| Cow position: | chr6:6850552-6850382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 335-499 | 
| Cow position: | chr6:21475961-21475790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 336-480 | 
| Cow position: | chr6:61576040-61575901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 90, 61 | 
| Conread position: | 336-494 | 
| Cow position: | chr6:48278660-48278821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 32, 71 | 
| Conread position: | 336-496 | 
| Cow position: | chr6:45535588-45535744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 91, 55 | 
| Conread position: | 336-499 | 
| Cow position: | chr6:16352141-16352291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 90, 11 | 
| Conread position: | 336-499 | 
| Cow position: | chr6:36939109-36938930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 336-499 | 
| Cow position: | chr6:37149417-37149252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 20, 70 | 
| Conread position: | 336-499 | 
| Cow position: | chr6:38207250-38207427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 9, 101 | 
| Conread position: | 336-499 | 
| Cow position: | chr6:60778004-60777833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 27, 82 | 
| Conread position: | 337-496 | 
| Cow position: | chr6:12631727-12631564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 23, 71 | 
| Conread position: | 337-499 | 
| Cow position: | chr6:37692983-37692813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 22, 114 | 
| Conread position: | 338-505 | 
| Cow position: | chr6:19446486-19446305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 341-498 | 
| Cow position: | chr6:9832427-9832270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 23, 73 | 
| Conread position: | 360-484 | 
| Cow position: | chr6:48379409-48379536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 360-491 | 
| Cow position: | chr6:27219368-27219238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 67, 42 | 
| Conread position: | 360-499 | 
| Cow position: | chr6:14263687-14263828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 40, 95 | 
| Conread position: | 360-499 | 
| Cow position: | chr6:35842862-35842721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 360-499 | 
| Cow position: | chr6:60740212-60740077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 63, 30 | 
| Conread position: | 360-499 | 
| Cow position: | chr6:69153614-69153472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 360-501 | 
| Cow position: | chr6:67187883-67187745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 70, 41 | 
| Conread position: | 362-499 | 
| Cow position: | chr6:66947623-66947759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 61, 42 | 
| Conread position: | 365-499 | 
| Cow position: | chr6:17794562-17794701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 371-499 | 
| Cow position: | chr6:58076587-58076456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 389-487 | 
| Cow position: | chr6:50882755-50882656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 100 | 
| Alignm identity: | 83 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 389-499 | 
| Cow position: | chr6:7568297-7568187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 389-499 | 
| Cow position: | chr6:54867691-54867580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 37, 0 | 
Show alignments to all cow chromosomes.
