Cow genome map

Conread name: Pig4-TMW8026F11

Conread position: 277-501
Cow position: chr9:3198407-3198179 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 38

Conread position: 281-500
Cow position: chr9:34423399-34423628 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 26

Conread position: 284-499
Cow position: chr9:34484367-34484601 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 288-495
Cow position: chr9:9199985-9199780 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 30

Conread position: 288-503
Cow position: chr9:12337688-12337912 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 29

Conread position: 290-499
Cow position: chr9:26477009-26477222 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 74, 18

Conread position: 291-499
Cow position: chr9:9091316-9091099 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 36

Conread position: 291-499
Cow position: chr9:13670436-13670639 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 59

Conread position: 296-490
Cow position: chr9:56854880-56855068 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 7, 60

Conread position: 296-499
Cow position: chr9:26279371-26279163 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 8

Conread position: 297-493
Cow position: chr9:26683627-26683430 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 125, 0

Conread position: 298-499
Cow position: chr9:5110660-5110864 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 45

Conread position: 299-495
Cow position: chr9:50310965-50310760 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 61, 35

Conread position: 305-498
Cow position: chr9:20828707-20828912 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 306-499
Cow position: chr9:36634317-36634513 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 46

Conread position: 308-477
Cow position: chr9:53323970-53323800 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 94, 42

Conread position: 308-484
Cow position: chr9:8645071-8645257 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 26

Conread position: 311-498
Cow position: chr9:54677067-54677269 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 23

Conread position: 311-502
Cow position: chr9:11448000-11447799 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 122

Conread position: 312-474
Cow position: chr9:35534193-35534018 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 312-484
Cow position: chr9:39011657-39011478 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 312-493
Cow position: chr9:5836588-5836764 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 6

Conread position: 313-493
Cow position: chr9:37062412-37062594 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 313-499
Cow position: chr9:15806117-15805917 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 314-493
Cow position: chr9:54364036-54363860 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 88

Conread position: 314-499
Cow position: chr9:38624815-38624618 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 315-499
Cow position: chr9:22447481-22447288 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 315-499
Cow position: chr9:25375922-25375730 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 164

Conread position: 316-499
Cow position: chr9:36624104-36623919 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 32

Conread position: 317-483
Cow position: chr9:18008937-18008763 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 44

Conread position: 317-500
Cow position: chr9:6392477-6392654 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 107, 83

Conread position: 318-483
Cow position: chr9:54611502-54611327 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 73, 18

Conread position: 318-490
Cow position: chr9:28747702-28747523 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 90

Conread position: 318-493
Cow position: chr9:8967758-8967934 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 79

Conread position: 318-493
Cow position: chr9:37127476-37127651 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 40

Conread position: 318-499
Cow position: chr9:8613397-8613205 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 318-499
Cow position: chr9:35832797-35832613 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 16

Conread position: 318-500
Cow position: chr9:61019550-61019355 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 318-502
Cow position: chr9:765832-766009 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 105, 18

Conread position: 319-483
Cow position: chr9:34286616-34286789 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 15

Conread position: 319-490
Cow position: chr9:54630141-54630307 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 15

Conread position: 319-493
Cow position: chr9:48901018-48900836 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 319-499
Cow position: chr9:12786660-12786467 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 319-499
Cow position: chr9:34135546-34135722 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 319-499
Cow position: chr9:34283778-34283959 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 36, 15

Conread position: 319-499
Cow position: chr9:36457814-36458005 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 15

Conread position: 319-499
Cow position: chr9:54681338-54681515 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 57

Conread position: 320-493
Cow position: chr9:19657156-19656976 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 320-499
Cow position: chr9:9311687-9311864 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 31

Conread position: 320-499
Cow position: chr9:21292588-21292402 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 12

Conread position: 320-503
Cow position: chr9:56827303-56827486 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 17

Conread position: 320-527
Cow position: chr9:34362554-34362771 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 201

Conread position: 321-498
Cow position: chr9:35306530-35306341 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 62

Conread position: 321-499
Cow position: chr9:41644931-41644744 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 9

Conread position: 322-466
Cow position: chr9:39142536-39142391 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 10

Conread position: 322-493
Cow position: chr9:43202168-43202334 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 35

Conread position: 322-501
Cow position: chr9:5155922-5156109 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 323-482
Cow position: chr9:54086189-54086025 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 20

Conread position: 323-484
Cow position: chr9:35932993-35932823 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 71

Conread position: 323-499
Cow position: chr9:22434102-22433922 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 40, 13

Conread position: 324-484
Cow position: chr9:16216801-16216972 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 12

Conread position: 324-499
Cow position: chr9:8901407-8901221 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 14

Conread position: 324-499
Cow position: chr9:11168567-11168736 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 324-499
Cow position: chr9:32089215-32089395 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 74, 10

Conread position: 324-499
Cow position: chr9:35466700-35466516 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 327-499
Cow position: chr9:5342420-5342242 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 7

Conread position: 327-499
Cow position: chr9:7806129-7805955 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 327-499
Cow position: chr9:9443777-9443595 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 332-499
Cow position: chr9:32307393-32307225 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 18

Conread position: 334-481
Cow position: chr9:3369828-3369982 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 127

Conread position: 334-484
Cow position: chr9:21460321-21460160 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 334-493
Cow position: chr9:10316544-10316384 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 334-493
Cow position: chr9:12773526-12773690 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 78

Conread position: 334-493
Cow position: chr9:20525245-20525405 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 334-499
Cow position: chr9:27345757-27345578 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 334-499
Cow position: chr9:40005309-40005480 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 334-500
Cow position: chr9:11161170-11161336 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 112

Conread position: 336-439
Cow position: chr9:6226333-6226228 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 336-499
Cow position: chr9:41282846-41283021 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 337-499
Cow position: chr9:52998532-52998374 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 20

Conread position: 338-499
Cow position: chr9:42446150-42445977 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 340-503
Cow position: chr9:5835988-5836160 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 64

Conread position: 341-498
Cow position: chr9:9815252-9815418 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 353-484
Cow position: chr9:11393347-11393216 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 55

Conread position: 359-484
Cow position: chr9:9243410-9243542 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 360-480
Cow position: chr9:15215823-15215700 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 360-481
Cow position: chr9:40603534-40603656 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 360-483
Cow position: chr9:33541919-33542045 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 360-496
Cow position: chr9:55288022-55287886 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 42

Conread position: 360-499
Cow position: chr9:34707443-34707306 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 47

Conread position: 360-499
Cow position: chr9:44093218-44093076 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 360-502
Cow position: chr9:63185830-63185686 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 360-503
Cow position: chr9:27308011-27307872 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 362-494
Cow position: chr9:52258197-52258061 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 120

Conread position: 371-499
Cow position: chr9:1729799-1729668 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 371-499
Cow position: chr9:41964855-41964729 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 25

Conread position: 377-500
Cow position: chr9:9551974-9552096 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 385-494
Cow position: chr9:9088498-9088609 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 392-499
Cow position: chr9:43342229-43342337 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.