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Cow genome map

           
Conread name:
           
Pig4-TMW8027E24
        

               
Conread position:
               
354-782
               

               
Cow position:
               
chr11:6245068-6245507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 214
               

               
Conread position:
               
379-691
               

               
Cow position:
               
chr11:44036496-44036811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
61, 187
               

               
Conread position:
               
380-724
               

               
Cow position:
               
chr11:44575955-44575629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 57
               

               
Conread position:
               
380-777
               

               
Cow position:
               
chr11:44031781-44032189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
380-784
               

               
Cow position:
               
chr11:27248273-27248678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
382-784
               

               
Cow position:
               
chr11:1486083-1485671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
384-637
               

               
Cow position:
               
chr11:65430847-65431091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
384-638
               

               
Cow position:
               
chr11:75355396-75355658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
384-662
               

               
Cow position:
               
chr11:24937447-24937728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
384-695
               

               
Cow position:
               
chr11:69119085-69119389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 110
               

               
Conread position:
               
384-698
               

               
Cow position:
               
chr11:43897923-43898237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 159
               

               
Conread position:
               
384-702
               

               
Cow position:
               
chr11:47544913-47545235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 187
               

               
Conread position:
               
384-708
               

               
Cow position:
               
chr11:1849380-1849068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
52, 99
               

               
Conread position:
               
384-708
               

               
Cow position:
               
chr11:64090301-64089988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
57, 148
               

               
Conread position:
               
384-737
               

               
Cow position:
               
chr11:18707028-18706687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
384-758
               

               
Cow position:
               
chr11:11557954-11558335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
384-765
               

               
Cow position:
               
chr11:21844350-21843969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 144
               

               
Conread position:
               
384-767
               

               
Cow position:
               
chr11:16342456-16342076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
384-772
               

               
Cow position:
               
chr11:45646808-45646420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
384-777
               

               
Cow position:
               
chr11:6234093-6233695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
384-777
               

               
Cow position:
               
chr11:35580039-35580444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 172
               

               
Conread position:
               
384-780
               

               
Cow position:
               
chr11:20238459-20238862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
384-780
               

               
Cow position:
               
chr11:20761630-20762038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
384-780
               

               
Cow position:
               
chr11:27405283-27404886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 113
               

               
Conread position:
               
384-780
               

               
Cow position:
               
chr11:65762811-65762399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
384-780
               

               
Cow position:
               
chr11:83043575-83043181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 44
               

               
Conread position:
               
384-781
               

               
Cow position:
               
chr11:27746706-27747104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 167
               

               
Conread position:
               
384-781
               

               
Cow position:
               
chr11:52297438-52297036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 185
               

               
Conread position:
               
384-782
               

               
Cow position:
               
chr11:50153033-50152624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 185
               

               
Conread position:
               
384-783
               

               
Cow position:
               
chr11:62490219-62490611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
385-622
               

               
Cow position:
               
chr11:16251462-16251222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
97, 182
               

               
Conread position:
               
385-686
               

               
Cow position:
               
chr11:8428280-8428598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
9, 198
               

               
Conread position:
               
385-698
               

               
Cow position:
               
chr11:36799512-36799209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
385-765
               

               
Cow position:
               
chr11:85723488-85723864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
385-768
               

               
Cow position:
               
chr11:15285831-15285451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
385-772
               

               
Cow position:
               
chr11:40818852-40818455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 29
               

               
Conread position:
               
386-679
               

               
Cow position:
               
chr11:41812125-41811836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 152
               

               
Conread position:
               
386-726
               

               
Cow position:
               
chr11:23586422-23586762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 133
               

               
Conread position:
               
386-767
               

               
Cow position:
               
chr11:31525651-31526052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 157
               

               
Conread position:
               
387-533
               

               
Cow position:
               
chr11:18372866-18373014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
387-533
               

               
Cow position:
               
chr11:25336863-25337013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
387-551
               

               
Cow position:
               
chr11:62808860-62808693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
387-559
               

               
Cow position:
               
chr11:25165232-25165405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
387-592
               

               
Cow position:
               
chr11:63516612-63516819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 156
               

               
Conread position:
               
387-599
               

               
Cow position:
               
chr11:21830564-21830349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
387-615
               

               
Cow position:
               
chr11:38193940-38194172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 180
               

               
Conread position:
               
387-620
               

               
Cow position:
               
chr11:83196287-83196517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
387-625
               

               
Cow position:
               
chr11:81174678-81174909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 39
               

               
Conread position:
               
387-634
               

               
Cow position:
               
chr11:18591645-18591400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
387-634
               

               
Cow position:
               
chr11:61202951-61203199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 152
               

               
Conread position:
               
387-642
               

               
Cow position:
               
chr11:8339616-8339364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
96, 47
               

               
Conread position:
               
387-642
               

               
Cow position:
               
chr11:36113946-36114198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
387-646
               

               
Cow position:
               
chr11:56728735-56728996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
51, 152
               

               
Conread position:
               
387-655
               

               
Cow position:
               
chr11:21497329-21497578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
387-660
               

               
Cow position:
               
chr11:18341250-18340979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
387-668
               

               
Cow position:
               
chr11:30912204-30911935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
52, 110
               

               
Conread position:
               
387-668
               

               
Cow position:
               
chr11:70273089-70273375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
387-691
               

               
Cow position:
               
chr11:33341358-33341053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
387-692
               

               
Cow position:
               
chr11:49934953-49934638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
387-694
               

               
Cow position:
               
chr11:44234143-44234450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
387-696
               

               
Cow position:
               
chr11:59702273-59702587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
387-698
               

               
Cow position:
               
chr11:35684709-35684402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 172
               

               
Conread position:
               
387-698
               

               
Cow position:
               
chr11:62151093-62150795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
387-698
               

               
Cow position:
               
chr11:76114444-76114741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
387-698
               

               
Cow position:
               
chr11:83230599-83230302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
253, 30
               

               
Conread position:
               
387-715
               

               
Cow position:
               
chr11:23138273-23137937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
387-715
               

               
Cow position:
               
chr11:48271983-48272316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 163
               

               
Conread position:
               
387-715
               

               
Cow position:
               
chr11:54334123-54334444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
387-715
               

               
Cow position:
               
chr11:63847638-63847960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
387-740
               

               
Cow position:
               
chr11:4663250-4662909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
387-742
               

               
Cow position:
               
chr11:3393422-3393067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
387-758
               

               
Cow position:
               
chr11:81162643-81162284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
387-764
               

               
Cow position:
               
chr11:32198728-32199112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
387-764
               

               
Cow position:
               
chr11:34145128-34144750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 174
               

               
Conread position:
               
387-765
               

               
Cow position:
               
chr11:9221937-9221552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
51, 36
               

               
Conread position:
               
387-765
               

               
Cow position:
               
chr11:25791903-25791523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
387-765
               

               
Cow position:
               
chr11:55744262-55744639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 52
               

               
Conread position:
               
387-765
               

               
Cow position:
               
chr11:55761667-55762027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
253, 10
               

               
Conread position:
               
387-766
               

               
Cow position:
               
chr11:8525325-8524947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 153
               

               
Conread position:
               
387-766
               

               
Cow position:
               
chr11:45872530-45872139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr11:5418476-5418088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr11:15503889-15504281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
52, 155
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr11:19487687-19487307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr11:43361008-43360615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
48, 236
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr11:62620173-62620548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 33
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr11:64029468-64029095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr11:65607905-65607519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 156
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr11:70382907-70382517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 117
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr11:70484073-70483679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
51, 290
               

               
Conread position:
               
387-773
               

               
Cow position:
               
chr11:48544231-48544614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
387-777
               

               
Cow position:
               
chr11:40969-41352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
52, 97
               

               
Conread position:
               
387-777
               

               
Cow position:
               
chr11:6400284-6399882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
387-777
               

               
Cow position:
               
chr11:15772934-15772530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 188
               

               
Conread position:
               
387-777
               

               
Cow position:
               
chr11:29960093-29960474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 28
               

               
Conread position:
               
387-777
               

               
Cow position:
               
chr11:30354855-30355228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
387-777
               

               
Cow position:
               
chr11:41986255-41985866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
387-777
               

               
Cow position:
               
chr11:52381082-52380690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
387-777
               

               
Cow position:
               
chr11:66733624-66734014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
387-777
               

               
Cow position:
               
chr11:75480238-75479840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 29
               

               
Conread position:
               
387-780
               

               
Cow position:
               
chr11:1625426-1625036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 42
               

               
Conread position:
               
387-780
               

               
Cow position:
               
chr11:4207101-4207496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
387-780
               

               
Cow position:
               
chr11:15016834-15017244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
387-780
               

               
Cow position:
               
chr11:17889938-17889542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
387-781
               

               
Cow position:
               
chr11:2925502-2925122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 121
               

               
Conread position:
               
387-781
               

               
Cow position:
               
chr11:66041062-66041458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
387-781
               

               
Cow position:
               
chr11:66188532-66188134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
387-782
               

               
Cow position:
               
chr11:17860365-17859965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
387-782
               

               
Cow position:
               
chr11:30720886-30721287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
387-783
               

               
Cow position:
               
chr11:35347969-35347564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 154
               

               
Conread position:
               
387-783
               

               
Cow position:
               
chr11:36112206-36112608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 172
               

               
Conread position:
               
387-783
               

               
Cow position:
               
chr11:36182477-36182880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
387-783
               

               
Cow position:
               
chr11:53773461-53773871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
51, 186
               

               
Conread position:
               
387-783
               

               
Cow position:
               
chr11:55333697-55334109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
387-784
               

               
Cow position:
               
chr11:68910059-68909662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
387-787
               

               
Cow position:
               
chr11:2788168-2788587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
387-787
               

               
Cow position:
               
chr11:21728479-21728095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
387-787
               

               
Cow position:
               
chr11:53778401-53778811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
387-787
               

               
Cow position:
               
chr11:57725040-57724630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
51, 161
               

               
Conread position:
               
387-789
               

               
Cow position:
               
chr11:42292047-42291645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 145
               

               
Conread position:
               
387-790
               

               
Cow position:
               
chr11:11469845-11469459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
387-791
               

               
Cow position:
               
chr11:26535563-26535980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 208
               

               
Conread position:
               
387-799
               

               
Cow position:
               
chr11:42358913-42359295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
252, 42
               

               
Conread position:
               
387-808
               

               
Cow position:
               
chr11:10095133-10095556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
387-810
               

               
Cow position:
               
chr11:46748078-46747644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 141
               

               
Conread position:
               
387-816
               

               
Cow position:
               
chr11:39462406-39462839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
51, 183
               

               
Conread position:
               
387-822
               

               
Cow position:
               
chr11:35723765-35724198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 143
               

               
Conread position:
               
388-537
               

               
Cow position:
               
chr11:71846559-71846405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
388-626
               

               
Cow position:
               
chr11:2309663-2309899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
388-629
               

               
Cow position:
               
chr11:42793186-42792944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
51, 156
               

               
Conread position:
               
388-653
               

               
Cow position:
               
chr11:30120872-30120608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 36
               

               
Conread position:
               
388-686
               

               
Cow position:
               
chr11:23128750-23128453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 50
               

               
Conread position:
               
388-689
               

               
Cow position:
               
chr11:10213776-10213479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
388-695
               

               
Cow position:
               
chr11:1362691-1362372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
388-698
               

               
Cow position:
               
chr11:36238571-36238876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
388-777
               

               
Cow position:
               
chr11:38236033-38236427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
388-782
               

               
Cow position:
               
chr11:36286488-36286892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
389-592
               

               
Cow position:
               
chr11:71455578-71455784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 175
               

               
Conread position:
               
389-686
               

               
Cow position:
               
chr11:31352782-31352465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
389-696
               

               
Cow position:
               
chr11:377858-377545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 179
               

               
Conread position:
               
389-697
               

               
Cow position:
               
chr11:44636969-44636656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
389-715
               

               
Cow position:
               
chr11:61958959-61958629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 145
               

               
Conread position:
               
389-762
               

               
Cow position:
               
chr11:34120988-34121362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 128
               

               
Conread position:
               
389-767
               

               
Cow position:
               
chr11:2907731-2907362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 158
               

               
Conread position:
               
389-767
               

               
Cow position:
               
chr11:80564095-80564469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
250, 56
               

               
Conread position:
               
389-781
               

               
Cow position:
               
chr11:67931705-67931305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
389-783
               

               
Cow position:
               
chr11:15632769-15632372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 181
               

               
Conread position:
               
389-783
               

               
Cow position:
               
chr11:23251813-23251412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
49, 165
               

               
Conread position:
               
390-615
               

               
Cow position:
               
chr11:37347265-37347493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 156
               

               
Conread position:
               
390-685
               

               
Cow position:
               
chr11:67747073-67747370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
48, 160
               

               
Conread position:
               
390-767
               

               
Cow position:
               
chr11:3720043-3720427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 183
               

               
Conread position:
               
393-679
               

               
Cow position:
               
chr11:9463623-9463914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 182
               

               
Conread position:
               
393-762
               

               
Cow position:
               
chr11:83066290-83066659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
393-780
               

               
Cow position:
               
chr11:45631970-45631595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
45, 176
               

               
Conread position:
               
393-783
               

               
Cow position:
               
chr11:259386-258985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 171
               

               
Conread position:
               
393-783
               

               
Cow position:
               
chr11:81300818-81300433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
45, 149
               

               
Conread position:
               
394-691
               

               
Cow position:
               
chr11:45898259-45897957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
45, 5
               

               
Conread position:
               
395-782
               

               
Cow position:
               
chr11:68912939-68913329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
397-646
               

               
Cow position:
               
chr11:32377986-32378234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
397-767
               

               
Cow position:
               
chr11:14470169-14470533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
397-780
               

               
Cow position:
               
chr11:42016840-42016454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
397-780
               

               
Cow position:
               
chr11:72375890-72375480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 169
               

               
Conread position:
               
397-781
               

               
Cow position:
               
chr11:36940803-36940408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
397-783
               

               
Cow position:
               
chr11:30165305-30165698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
41, 150
               

               
Conread position:
               
399-696
               

               
Cow position:
               
chr11:73924764-73924465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
11, 157
               

               
Conread position:
               
399-767
               

               
Cow position:
               
chr11:17083500-17083141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
402-695
               

               
Cow position:
               
chr11:66425084-66424784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
402-781
               

               
Cow position:
               
chr11:15338878-15339241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
237, 33
               

               
Conread position:
               
403-766
               

               
Cow position:
               
chr11:83397701-83398078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 163
               

               
Conread position:
               
403-767
               

               
Cow position:
               
chr11:36058605-36058970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
403-767
               

               
Cow position:
               
chr11:55052686-55053035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
403-780
               

               
Cow position:
               
chr11:68905265-68904903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
405-763
               

               
Cow position:
               
chr11:36194097-36194462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
405-769
               

               
Cow position:
               
chr11:63434252-63433892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
35, 139
               

               
Conread position:
               
408-695
               

               
Cow position:
               
chr11:18572613-18572896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
408-780
               

               
Cow position:
               
chr11:47639221-47638839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
408-782
               

               
Cow position:
               
chr11:13592543-13592925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
30, 132
               

               
Conread position:
               
408-782
               

               
Cow position:
               
chr11:74316520-74316893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 139
               

               
Conread position:
               
409-708
               

               
Cow position:
               
chr11:33310777-33311086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 126
               

               
Conread position:
               
409-767
               

               
Cow position:
               
chr11:49152758-49153112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
5, 87
               

               
Conread position:
               
409-769
               

               
Cow position:
               
chr11:13043336-13042974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
409-770
               

               
Cow position:
               
chr11:73354248-73353892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 136
               

               
Conread position:
               
409-785
               

               
Cow position:
               
chr11:11125469-11125856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 136
               

               
Conread position:
               
410-702
               

               
Cow position:
               
chr11:48306531-48306244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
410-715
               

               
Cow position:
               
chr11:77682974-77683289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 159
               

               
Conread position:
               
410-715
               

               
Cow position:
               
chr11:80530173-80530474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
9, 137
               

               
Conread position:
               
410-767
               

               
Cow position:
               
chr11:23272193-23271834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
411-766
               

               
Cow position:
               
chr11:66572691-66572321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
412-687
               

               
Cow position:
               
chr11:64638719-64638438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
412-689
               

               
Cow position:
               
chr11:35874181-35873913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
412-731
               

               
Cow position:
               
chr11:59872744-59873059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
412-766
               

               
Cow position:
               
chr11:63469687-63470028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
6, 43
               

               
Conread position:
               
412-767
               

               
Cow position:
               
chr11:77705570-77705922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
412-768
               

               
Cow position:
               
chr11:48474512-48474882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
8, 134
               

               
Conread position:
               
412-777
               

               
Cow position:
               
chr11:2917775-2917410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 144
               

               
Conread position:
               
412-777
               

               
Cow position:
               
chr11:65157600-65157222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
412-781
               

               
Cow position:
               
chr11:17227835-17227465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
26, 208
               

               
Conread position:
               
412-783
               

               
Cow position:
               
chr11:34646402-34646785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
413-769
               

               
Cow position:
               
chr11:33348374-33348025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 133
               

               
Conread position:
               
413-781
               

               
Cow position:
               
chr11:37804743-37804366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
413-783
               

               
Cow position:
               
chr11:13061418-13061065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
413-790
               

               
Cow position:
               
chr11:5433078-5433460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
414-696
               

               
Cow position:
               
chr11:77128475-77128757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
418-715
               

               
Cow position:
               
chr11:34032386-34032083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
418-729
               

               
Cow position:
               
chr11:30954815-30955128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 141
               

               
Conread position:
               
420-783
               

               
Cow position:
               
chr11:32055366-32054994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
420-793
               

               
Cow position:
               
chr11:67600601-67600977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
421-691
               

               
Cow position:
               
chr11:5286-5555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
422-756
               

               
Cow position:
               
chr11:38670503-38670851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 125
               

               
Conread position:
               
422-783
               

               
Cow position:
               
chr11:77745435-77745060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
422-786
               

               
Cow position:
               
chr11:9270907-9270546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
424-767
               

               
Cow position:
               
chr11:49148860-49149218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 105
               

               
Conread position:
               
426-694
               

               
Cow position:
               
chr11:53553064-53553310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
213, 14
               

               
Conread position:
               
426-777
               

               
Cow position:
               
chr11:30830791-30830440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 143
               

               
Conread position:
               
428-772
               

               
Cow position:
               
chr11:77319239-77319588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
429-632
               

               
Cow position:
               
chr11:21428164-21427961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
429-776
               

               
Cow position:
               
chr11:8545185-8544834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 129
               

               
Conread position:
               
429-783
               

               
Cow position:
               
chr11:2083964-2084333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
10, 135
               

               
Conread position:
               
432-777
               

               
Cow position:
               
chr11:75874921-75874589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
7, 96
               

               
Conread position:
               
433-695
               

               
Cow position:
               
chr11:261426-261172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
437-761
               

               
Cow position:
               
chr11:81135325-81135003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
437-781
               

               
Cow position:
               
chr11:80556057-80556405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 132
               

               
Conread position:
               
438-705
               

               
Cow position:
               
chr11:11646907-11647181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 146
               

               
Conread position:
               
440-782
               

               
Cow position:
               
chr11:45434926-45435262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
441-765
               

               
Cow position:
               
chr11:2576063-2575738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
441-775
               

               
Cow position:
               
chr11:71390723-71390393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
40, 128
               

               
Conread position:
               
441-781
               

               
Cow position:
               
chr11:3175531-3175855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
443-755
               

               
Cow position:
               
chr11:39499201-39499515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
443-766
               

               
Cow position:
               
chr11:28993889-28993577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 100
               

               
Conread position:
               
443-767
               

               
Cow position:
               
chr11:51729131-51729446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
443-770
               

               
Cow position:
               
chr11:40395282-40395611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
443-807
               

               
Cow position:
               
chr11:55494522-55494873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
444-784
               

               
Cow position:
               
chr11:44222734-44223072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
445-773
               

               
Cow position:
               
chr11:63435362-63435700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
445-777
               

               
Cow position:
               
chr11:35213316-35212988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
448-765
               

               
Cow position:
               
chr11:47772544-47772212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
450-773
               

               
Cow position:
               
chr11:18851768-18852081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
451-798
               

               
Cow position:
               
chr11:32126461-32126817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
452-777
               

               
Cow position:
               
chr11:32254367-32254034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
454-777
               

               
Cow position:
               
chr11:23407315-23407643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
454-777
               

               
Cow position:
               
chr11:49057256-49057566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
461-777
               

               
Cow position:
               
chr11:67615382-67615070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
178, 72
               

               
Conread position:
               
465-780
               

               
Cow position:
               
chr11:63999223-63998904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
7, 101
               

               
Conread position:
               
466-777
               

               
Cow position:
               
chr11:67615061-67614742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
13, 87
               

               
Conread position:
               
473-783
               

               
Cow position:
               
chr11:375332-375649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
475-775
               

               
Cow position:
               
chr11:40608718-40608412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
165, 93
               

               
Conread position:
               
475-777
               

               
Cow position:
               
chr11:48659810-48660112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 90
               

               
Conread position:
               
477-777
               

               
Cow position:
               
chr11:49873006-49872704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
163, 87
               

               
Conread position:
               
477-780
               

               
Cow position:
               
chr11:31227849-31228139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
163, 46
               

               
Conread position:
               
477-780
               

               
Cow position:
               
chr11:52690641-52690340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
477-781
               

               
Cow position:
               
chr11:27719442-27719152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
477-781
               

               
Cow position:
               
chr11:83032564-83032863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
173, 20
               

               
Conread position:
               
478-687
               

               
Cow position:
               
chr11:80537368-80537574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
478-767
               

               
Cow position:
               
chr11:26275076-26274794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
478-780
               

               
Cow position:
               
chr11:70756363-70756659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
162, 50
               

               
Conread position:
               
478-782
               

               
Cow position:
               
chr11:50472197-50472504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
478-783
               

               
Cow position:
               
chr11:69977859-69978153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
162, 25
               

               
Conread position:
               
478-783
               

               
Cow position:
               
chr11:70206205-70206504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
238, 15
               

               
Conread position:
               
478-783
               

               
Cow position:
               
chr11:81168150-81167843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 211
               

               
Conread position:
               
479-702
               

               
Cow position:
               
chr11:6194088-6194308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
157, 56
               

               
Conread position:
               
480-783
               

               
Cow position:
               
chr11:62789012-62789317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
160, 62
               

               
Conread position:
               
483-759
               

               
Cow position:
               
chr11:31874979-31875258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
483-768
               

               
Cow position:
               
chr11:63035289-63034997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
486-780
               

               
Cow position:
               
chr11:42066750-42067050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
487-767
               

               
Cow position:
               
chr11:17036639-17036360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
491-766
               

               
Cow position:
               
chr11:30493893-30494159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
148, 54
               

               
Conread position:
               
497-715
               

               
Cow position:
               
chr11:41293917-41293702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
141, 60
               

               
Conread position:
               
497-780
               

               
Cow position:
               
chr11:39060700-39060419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
499-761
               

               
Cow position:
               
chr11:24599487-24599232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
54, 46
               

               
Conread position:
               
500-787
               

               
Cow position:
               
chr11:17676467-17676181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
502-780
               

               
Cow position:
               
chr11:46922993-46922701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
9, 5
               

               
Conread position:
               
507-777
               

               
Cow position:
               
chr11:42182951-42183221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
507-780
               

               
Cow position:
               
chr11:41603779-41603516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
510-776
               

               
Cow position:
               
chr11:33409347-33409084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
510-784
               

               
Cow position:
               
chr11:48085829-48086109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
513-692
               

               
Cow position:
               
chr11:28168508-28168330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
513-747
               

               
Cow position:
               
chr11:31410967-31410728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
513-765
               

               
Cow position:
               
chr11:27565252-27565486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
515-713
               

               
Cow position:
               
chr11:35803052-35803250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 49
               

               
Conread position:
               
515-766
               

               
Cow position:
               
chr11:18910960-18910713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
515-766
               

               
Cow position:
               
chr11:63866736-63866490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 28
               

               
Conread position:
               
515-767
               

               
Cow position:
               
chr11:41313738-41313490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
515-778
               

               
Cow position:
               
chr11:47724821-47725073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
123, 46
               

               
Conread position:
               
515-782
               

               
Cow position:
               
chr11:62813033-62812764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
518-781
               

               
Cow position:
               
chr11:17721883-17721614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
122, 33
               

               
Conread position:
               
520-769
               

               
Cow position:
               
chr11:4637250-4637001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
116, 44
               

               
Conread position:
               
520-778
               

               
Cow position:
               
chr11:30867104-30867360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
527-707
               

               
Cow position:
               
chr11:10363458-10363279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
112, 30
               

               
Conread position:
               
535-767
               

               
Cow position:
               
chr11:25119995-25119764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
105, 10
               

               
Conread position:
               
535-777
               

               
Cow position:
               
chr11:1932555-1932305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
541-707
               

               
Cow position:
               
chr11:34413396-34413232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
545-681
               

               
Cow position:
               
chr11:36329090-36328953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
545-777
               

               
Cow position:
               
chr11:18447548-18447319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 148
               

               
Conread position:
               
551-767
               

               
Cow position:
               
chr11:41212994-41213224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
551-776
               

               
Cow position:
               
chr11:62742692-62742467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
563-776
               

               
Cow position:
               
chr11:38211608-38211822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 196
               

               
Conread position:
               
563-780
               

               
Cow position:
               
chr11:897636-897850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
564-792
               

               
Cow position:
               
chr11:15382539-15382294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
565-767
               

               
Cow position:
               
chr11:30172274-30172471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
566-777
               

               
Cow position:
               
chr11:80639584-80639370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 173
               

               
Conread position:
               
568-766
               

               
Cow position:
               
chr11:30895036-30894832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
568-780
               

               
Cow position:
               
chr11:3896731-3896512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
568-787
               

               
Cow position:
               
chr11:64104967-64105185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
568-842
               

               
Cow position:
               
chr11:21885801-21886080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
134, 181
               

               
Conread position:
               
569-780
               

               
Cow position:
               
chr11:49255373-49255596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
570-780
               

               
Cow position:
               
chr11:30964316-30964529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
571-782
               

               
Cow position:
               
chr11:4225068-4225276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
574-780
               

               
Cow position:
               
chr11:63165673-63165466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
574-782
               

               
Cow position:
               
chr11:20205878-20205670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 127
               

               
Conread position:
               
580-782
               

               
Cow position:
               
chr11:56114918-56115126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
586-782
               

               
Cow position:
               
chr11:63478363-63478550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
183, 50
               

               
Conread position:
               
587-777
               

               
Cow position:
               
chr11:30986628-30986818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
587-804
               

               
Cow position:
               
chr11:51196096-51195889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 106
               

               
Conread position:
               
588-777
               

               
Cow position:
               
chr11:48315409-48315217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
588-789
               

               
Cow position:
               
chr11:15366985-15366783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 83
               

               
Conread position:
               
591-767
               

               
Cow position:
               
chr11:2484804-2484624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
591-781
               

               
Cow position:
               
chr11:1485236-1485048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
592-777
               

               
Cow position:
               
chr11:22884405-22884589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
596-777
               

               
Cow position:
               
chr11:66685910-66685728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 98
               

               
Conread position:
               
602-768
               

               
Cow position:
               
chr11:46884375-46884548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
605-767
               

               
Cow position:
               
chr11:63484942-63485104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
608-782
               

               
Cow position:
               
chr11:5176369-5176194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
609-780
               

               
Cow position:
               
chr11:71814715-71814888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
609-780
               

               
Cow position:
               
chr11:80296844-80296673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 137
               

               
Conread position:
               
612-765
               

               
Cow position:
               
chr11:4621419-4621265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
612-775
               

               
Cow position:
               
chr11:4411857-4411692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
613-777
               

               
Cow position:
               
chr11:74839623-74839786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
617-780
               

               
Cow position:
               
chr11:15591458-15591294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
617-782
               

               
Cow position:
               
chr11:54872743-54872572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
619-773
               

               
Cow position:
               
chr11:7617188-7617030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
619-782
               

               
Cow position:
               
chr11:63483961-63484128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
631-783
               

               
Cow position:
               
chr11:65431549-65431706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
641-815
               

               
Cow position:
               
chr11:81340499-81340324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
66, 163
               
Show alignments to all cow chromosomes.