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Cow genome map

           
Conread name:
           
Pig4-TMW8027E24
        

               
Conread position:
               
377-547
               

               
Cow position:
               
chr27:15858931-15859099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
380-637
               

               
Cow position:
               
chr27:24999578-24999838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
58, 180
               

               
Conread position:
               
384-629
               

               
Cow position:
               
chr27:2682991-2683235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
83, 52
               

               
Conread position:
               
384-707
               

               
Cow position:
               
chr27:4673173-4672843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
384-725
               

               
Cow position:
               
chr27:26959468-26959804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
384-766
               

               
Cow position:
               
chr27:26424433-26424807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
6, 43
               

               
Conread position:
               
384-769
               

               
Cow position:
               
chr27:24446004-24446372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
384-776
               

               
Cow position:
               
chr27:23891090-23890692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
384-777
               

               
Cow position:
               
chr27:15668614-15669017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
384-779
               

               
Cow position:
               
chr27:21668972-21669356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 38
               

               
Conread position:
               
384-781
               

               
Cow position:
               
chr27:14670228-14670628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 163
               

               
Conread position:
               
384-782
               

               
Cow position:
               
chr27:29493764-29494147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
98, 40
               

               
Conread position:
               
384-789
               

               
Cow position:
               
chr27:22220706-22220296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 91
               

               
Conread position:
               
384-793
               

               
Cow position:
               
chr27:28206950-28206546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 113
               

               
Conread position:
               
385-683
               

               
Cow position:
               
chr27:24014589-24014884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
385-695
               

               
Cow position:
               
chr27:7212561-7212870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
385-696
               

               
Cow position:
               
chr27:26440905-26441205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 158
               

               
Conread position:
               
385-767
               

               
Cow position:
               
chr27:8629720-8630105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
385-772
               

               
Cow position:
               
chr27:15408892-15409262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
385-776
               

               
Cow position:
               
chr27:19388170-19387779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 152
               

               
Conread position:
               
385-777
               

               
Cow position:
               
chr27:8353628-8353252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 117
               

               
Conread position:
               
386-782
               

               
Cow position:
               
chr27:18544148-18543742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
387-533
               

               
Cow position:
               
chr27:28276423-28276282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
387-592
               

               
Cow position:
               
chr27:23070210-23070412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
387-603
               

               
Cow position:
               
chr27:14902499-14902717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
51, 67
               

               
Conread position:
               
387-650
               

               
Cow position:
               
chr27:9090652-9090902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
387-651
               

               
Cow position:
               
chr27:4037-3784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 65
               

               
Conread position:
               
387-657
               

               
Cow position:
               
chr27:11296407-11296151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 85
               

               
Conread position:
               
387-660
               

               
Cow position:
               
chr27:15319601-15319335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
387-694
               

               
Cow position:
               
chr27:24738652-24738955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
152, 16
               

               
Conread position:
               
387-696
               

               
Cow position:
               
chr27:26413106-26413411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
387-715
               

               
Cow position:
               
chr27:20795933-20795616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
252, 16
               

               
Conread position:
               
387-715
               

               
Cow position:
               
chr27:30988947-30988621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
387-764
               

               
Cow position:
               
chr27:18739537-18739145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
387-765
               

               
Cow position:
               
chr27:16284622-16284259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
387-766
               

               
Cow position:
               
chr27:299234-299605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr27:7412532-7412162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr27:13841526-13841131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 173
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr27:24331875-24331482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 174
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr27:26433662-26434045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
52, 98
               

               
Conread position:
               
387-767
               

               
Cow position:
               
chr27:30915151-30914775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
387-768
               

               
Cow position:
               
chr27:21393355-21393726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
85, 40
               

               
Conread position:
               
387-770
               

               
Cow position:
               
chr27:29431610-29431241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 141
               

               
Conread position:
               
387-773
               

               
Cow position:
               
chr27:13875884-13875495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
51, 169
               

               
Conread position:
               
387-777
               

               
Cow position:
               
chr27:11480480-11480881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 43
               

               
Conread position:
               
387-777
               

               
Cow position:
               
chr27:28496225-28496613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 152
               

               
Conread position:
               
387-777
               

               
Cow position:
               
chr27:30890440-30890059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 162
               

               
Conread position:
               
387-779
               

               
Cow position:
               
chr27:23930114-23929732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
387-780
               

               
Cow position:
               
chr27:4944379-4944752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
387-780
               

               
Cow position:
               
chr27:10980013-10979615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
51, 149
               

               
Conread position:
               
387-780
               

               
Cow position:
               
chr27:19685565-19685954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
387-780
               

               
Cow position:
               
chr27:19896906-19896513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 165
               

               
Conread position:
               
387-780
               

               
Cow position:
               
chr27:27460422-27460824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
51, 156
               

               
Conread position:
               
387-780
               

               
Cow position:
               
chr27:27856483-27856093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 48
               

               
Conread position:
               
387-780
               

               
Cow position:
               
chr27:31230944-31231324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
387-781
               

               
Cow position:
               
chr27:6500214-6499812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
52, 156
               

               
Conread position:
               
387-781
               

               
Cow position:
               
chr27:18030907-18031316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
51, 215
               

               
Conread position:
               
387-781
               

               
Cow position:
               
chr27:27019951-27020341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
387-781
               

               
Cow position:
               
chr27:30868589-30869000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 167
               

               
Conread position:
               
387-782
               

               
Cow position:
               
chr27:10307146-10307551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
387-782
               

               
Cow position:
               
chr27:19668639-19669051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
52, 188
               

               
Conread position:
               
387-783
               

               
Cow position:
               
chr27:16786976-16786584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 123
               

               
Conread position:
               
387-783
               

               
Cow position:
               
chr27:22035224-22035621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
387-783
               

               
Cow position:
               
chr27:28921747-28922142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
387-783
               

               
Cow position:
               
chr27:30406882-30407296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
37, 154
               

               
Conread position:
               
387-799
               

               
Cow position:
               
chr27:22440289-22439873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
387-799
               

               
Cow position:
               
chr27:26509007-26509419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
51, 154
               

               
Conread position:
               
388-673
               

               
Cow position:
               
chr27:4812728-4813018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 166
               

               
Conread position:
               
388-686
               

               
Cow position:
               
chr27:20553865-20553584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
251, 26
               

               
Conread position:
               
388-694
               

               
Cow position:
               
chr27:4835459-4835763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
388-780
               

               
Cow position:
               
chr27:22547256-22547634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 157
               

               
Conread position:
               
388-782
               

               
Cow position:
               
chr27:30765180-30764786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
388-809
               

               
Cow position:
               
chr27:6541773-6541363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
389-599
               

               
Cow position:
               
chr27:28061617-28061821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
389-697
               

               
Cow position:
               
chr27:12246806-12246495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
389-767
               

               
Cow position:
               
chr27:3306921-3306554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
389-767
               

               
Cow position:
               
chr27:26984489-26984122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
389-782
               

               
Cow position:
               
chr27:6550598-6550212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
391-825
               

               
Cow position:
               
chr27:18558509-18558065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
393-689
               

               
Cow position:
               
chr27:1123178-1122881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 163
               

               
Conread position:
               
393-767
               

               
Cow position:
               
chr27:26864975-26865340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
393-767
               

               
Cow position:
               
chr27:27632466-27632825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
106, 45
               

               
Conread position:
               
393-771
               

               
Cow position:
               
chr27:16705390-16705016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
393-780
               

               
Cow position:
               
chr27:17397303-17397697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 158
               

               
Conread position:
               
393-782
               

               
Cow position:
               
chr27:28931644-28932049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
45, 149
               

               
Conread position:
               
394-763
               

               
Cow position:
               
chr27:26643821-26643475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
397-634
               

               
Cow position:
               
chr27:20789240-20789474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
397-766
               

               
Cow position:
               
chr27:26427989-26428359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 145
               

               
Conread position:
               
397-777
               

               
Cow position:
               
chr27:17331642-17331249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 153
               

               
Conread position:
               
397-781
               

               
Cow position:
               
chr27:20828567-20828950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
17, 104
               

               
Conread position:
               
398-777
               

               
Cow position:
               
chr27:427111-426727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 134
               

               
Conread position:
               
399-766
               

               
Cow position:
               
chr27:19661082-19660697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
39, 175
               

               
Conread position:
               
402-698
               

               
Cow position:
               
chr27:23882239-23882527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
403-766
               

               
Cow position:
               
chr27:23554186-23554560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
36, 160
               

               
Conread position:
               
404-696
               

               
Cow position:
               
chr27:8405706-8405978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
235, 32
               

               
Conread position:
               
405-767
               

               
Cow position:
               
chr27:21978002-21978375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
405-783
               

               
Cow position:
               
chr27:12516328-12515947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
405-783
               

               
Cow position:
               
chr27:27438369-27438755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 127
               

               
Conread position:
               
408-767
               

               
Cow position:
               
chr27:22330536-22330890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
408-781
               

               
Cow position:
               
chr27:19500100-19500484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
409-781
               

               
Cow position:
               
chr27:20354712-20354354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
409-781
               

               
Cow position:
               
chr27:22171431-22171055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 137
               

               
Conread position:
               
409-782
               

               
Cow position:
               
chr27:16103936-16103563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 32
               

               
Conread position:
               
409-803
               

               
Cow position:
               
chr27:31372847-31373237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
5, 149
               

               
Conread position:
               
410-694
               

               
Cow position:
               
chr27:25277272-25276987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 120
               

               
Conread position:
               
410-695
               

               
Cow position:
               
chr27:31148892-31148605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 153
               

               
Conread position:
               
410-782
               

               
Cow position:
               
chr27:28001682-28002049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
411-776
               

               
Cow position:
               
chr27:8168300-8168663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 130
               

               
Conread position:
               
412-651
               

               
Cow position:
               
chr27:4829675-4829924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 148
               

               
Conread position:
               
412-773
               

               
Cow position:
               
chr27:12596893-12596544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
412-777
               

               
Cow position:
               
chr27:16478213-16478565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
412-780
               

               
Cow position:
               
chr27:27388895-27389273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 47
               

               
Conread position:
               
413-682
               

               
Cow position:
               
chr27:1498444-1498171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 131
               

               
Conread position:
               
413-703
               

               
Cow position:
               
chr27:20641216-20641498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
413-761
               

               
Cow position:
               
chr27:26239152-26238798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
413-781
               

               
Cow position:
               
chr27:23128585-23128219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
413-783
               

               
Cow position:
               
chr27:2592674-2592288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
416-781
               

               
Cow position:
               
chr27:1353714-1353335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
421-767
               

               
Cow position:
               
chr27:20101485-20101135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
47, 108
               

               
Conread position:
               
422-777
               

               
Cow position:
               
chr27:11435206-11435571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
422-780
               

               
Cow position:
               
chr27:20629159-20628812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
217, 14
               

               
Conread position:
               
424-697
               

               
Cow position:
               
chr27:30389180-30389455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
424-781
               

               
Cow position:
               
chr27:20283755-20283397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
429-766
               

               
Cow position:
               
chr27:20636958-20637289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
429-780
               

               
Cow position:
               
chr27:26226179-26226533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
430-764
               

               
Cow position:
               
chr27:27694662-27695004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
431-668
               

               
Cow position:
               
chr27:16626006-16625770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
431-761
               

               
Cow position:
               
chr27:29380967-29380635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
433-783
               

               
Cow position:
               
chr27:15867505-15867145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
5, 100
               

               
Conread position:
               
437-777
               

               
Cow position:
               
chr27:23594418-23594077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
202, 59
               

               
Conread position:
               
437-780
               

               
Cow position:
               
chr27:29504545-29504876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
40, 111
               

               
Conread position:
               
441-765
               

               
Cow position:
               
chr27:26188919-26188597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
443-769
               

               
Cow position:
               
chr27:22559725-22560060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
444-692
               

               
Cow position:
               
chr27:20092743-20092988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
445-780
               

               
Cow position:
               
chr27:23511084-23510729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
447-777
               

               
Cow position:
               
chr27:23917944-23918276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
467-644
               

               
Cow position:
               
chr27:24306896-24306725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
475-781
               

               
Cow position:
               
chr27:29164825-29164528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
243, 38
               

               
Conread position:
               
477-764
               

               
Cow position:
               
chr27:23107843-23108131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
163, 78
               

               
Conread position:
               
477-767
               

               
Cow position:
               
chr27:23485272-23484984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
478-686
               

               
Cow position:
               
chr27:26407108-26407307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
162, 62
               

               
Conread position:
               
478-769
               

               
Cow position:
               
chr27:22489335-22489038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
163, 57
               

               
Conread position:
               
478-769
               

               
Cow position:
               
chr27:23452516-23452229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
162, 60
               

               
Conread position:
               
478-777
               

               
Cow position:
               
chr27:26111852-26112160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
478-783
               

               
Cow position:
               
chr27:16965630-16965327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
478-783
               

               
Cow position:
               
chr27:20514878-20514577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
161, 61
               

               
Conread position:
               
485-775
               

               
Cow position:
               
chr27:15865661-15865370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
151, 205
               

               
Conread position:
               
486-698
               

               
Cow position:
               
chr27:22225546-22225752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
492-767
               

               
Cow position:
               
chr27:29593585-29593860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
497-740
               

               
Cow position:
               
chr27:20812949-20812710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
497-780
               

               
Cow position:
               
chr27:17646129-17646399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
142, 52
               

               
Conread position:
               
498-769
               

               
Cow position:
               
chr27:20517696-20517418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
498-783
               

               
Cow position:
               
chr27:12425325-12425040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
500-781
               

               
Cow position:
               
chr27:23559995-23560276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
142, 57
               

               
Conread position:
               
512-778
               

               
Cow position:
               
chr27:29597726-29597988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
515-780
               

               
Cow position:
               
chr27:590740-591014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
518-695
               

               
Cow position:
               
chr27:237287-237114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
520-783
               

               
Cow position:
               
chr27:12459300-12459041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
520-796
               

               
Cow position:
               
chr27:19509030-19508752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
522-779
               

               
Cow position:
               
chr27:20897010-20897264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 42
               

               
Conread position:
               
524-776
               

               
Cow position:
               
chr27:31210559-31210309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
116, 49
               

               
Conread position:
               
527-780
               

               
Cow position:
               
chr27:31004950-31004696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
543-777
               

               
Cow position:
               
chr27:15002985-15003222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
545-783
               

               
Cow position:
               
chr27:11982653-11982895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
551-783
               

               
Cow position:
               
chr27:26793793-26794031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
552-777
               

               
Cow position:
               
chr27:27055271-27055053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
552-791
               

               
Cow position:
               
chr27:7425201-7425445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
562-780
               

               
Cow position:
               
chr27:23957493-23957272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
564-783
               

               
Cow position:
               
chr27:7343453-7343678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
75, 113
               

               
Conread position:
               
565-765
               

               
Cow position:
               
chr27:30455968-30455763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
75, 124
               

               
Conread position:
               
565-780
               

               
Cow position:
               
chr27:18435159-18435376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
565-782
               

               
Cow position:
               
chr27:10404142-10404364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
568-739
               

               
Cow position:
               
chr27:30489439-30489610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 149
               

               
Conread position:
               
568-769
               

               
Cow position:
               
chr27:6319890-6319688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 123
               

               
Conread position:
               
571-780
               

               
Cow position:
               
chr27:22245594-22245396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
575-769
               

               
Cow position:
               
chr27:24693377-24693184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
575-769
               

               
Cow position:
               
chr27:26323412-26323208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
576-783
               

               
Cow position:
               
chr27:24223915-24223706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
577-810
               

               
Cow position:
               
chr27:11208592-11208832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
579-764
               

               
Cow position:
               
chr27:20770568-20770745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
579-767
               

               
Cow position:
               
chr27:17102856-17102668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 79
               

               
Conread position:
               
581-764
               

               
Cow position:
               
chr27:26400763-26400946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 121
               

               
Conread position:
               
581-781
               

               
Cow position:
               
chr27:29615000-29614796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
581-784
               

               
Cow position:
               
chr27:19576365-19576573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
584-769
               

               
Cow position:
               
chr27:15859342-15859531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
585-783
               

               
Cow position:
               
chr27:11134040-11133840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
586-782
               

               
Cow position:
               
chr27:10581482-10581285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
120, 24
               

               
Conread position:
               
586-782
               

               
Cow position:
               
chr27:13204412-13204217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
588-764
               

               
Cow position:
               
chr27:26504253-26504075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
589-777
               

               
Cow position:
               
chr27:2949377-2949559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
180, 51
               

               
Conread position:
               
591-766
               

               
Cow position:
               
chr27:19933017-19932835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
592-780
               

               
Cow position:
               
chr27:4398544-4398731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 109
               

               
Conread position:
               
592-781
               

               
Cow position:
               
chr27:9253169-9253358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
605-780
               

               
Cow position:
               
chr27:26118434-26118252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
608-780
               

               
Cow position:
               
chr27:3498482-3498310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
612-779
               

               
Cow position:
               
chr27:27449958-27450127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
612-780
               

               
Cow position:
               
chr27:27606369-27606539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 136
               

               
Conread position:
               
613-781
               

               
Cow position:
               
chr27:22748254-22748082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
613-783
               

               
Cow position:
               
chr27:26087242-26087070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 139
               

               
Conread position:
               
617-777
               

               
Cow position:
               
chr27:178785-178620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
621-783
               

               
Cow position:
               
chr27:19074104-19074271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
639-780
               

               
Cow position:
               
chr27:22150795-22150939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
639-780
               

               
Cow position:
               
chr27:28062299-28062439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 53
               
Show alignments to all cow chromosomes.