Cow genome map

Conread name: Pig4-TMW8027E24

Conread position: 363-645
Cow position: chrX:12405579-12405291 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 32

Conread position: 363-711
Cow position: chrX:22387436-22387096 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 46, 12

Conread position: 376-783
Cow position: chrX:18485617-18486035 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 277
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 63, 151

Conread position: 377-780
Cow position: chrX:34411664-34412079 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 75

Conread position: 382-714
Cow position: chrX:37836416-37836735 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 88, 56

Conread position: 382-780
Cow position: chrX:41238537-41238132 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 276
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 57, 137

Conread position: 384-673
Cow position: chrX:47362781-47362505 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 52

Conread position: 384-686
Cow position: chrX:37574687-37574971 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 255, 30

Conread position: 384-687
Cow position: chrX:45414469-45414172 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 38

Conread position: 384-688
Cow position: chrX:39558516-39558216 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 97, 40

Conread position: 384-695
Cow position: chrX:37232240-37232547 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 161

Conread position: 384-715
Cow position: chrX:6278675-6278340 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 235
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 55, 161

Conread position: 384-759
Cow position: chrX:17794816-17795189 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 45

Conread position: 384-765
Cow position: chrX:22482858-22482474 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 112

Conread position: 384-767
Cow position: chrX:6544087-6544462 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 30

Conread position: 384-767
Cow position: chrX:27145454-27145816 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 45

Conread position: 384-777
Cow position: chrX:34376786-34377167 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 55

Conread position: 384-780
Cow position: chrX:13912911-13913306 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 45

Conread position: 384-780
Cow position: chrX:37781287-37780882 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 188

Conread position: 384-782
Cow position: chrX:33466444-33466854 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 284
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 30

Conread position: 384-783
Cow position: chrX:37072236-37072620 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 19

Conread position: 384-805
Cow position: chrX:29542388-29541976 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 30

Conread position: 384-813
Cow position: chrX:10252352-10251942 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 19

Conread position: 385-696
Cow position: chrX:33493606-33493917 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 183

Conread position: 385-705
Cow position: chrX:43527335-43527657 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 44

Conread position: 385-780
Cow position: chrX:12290567-12290948 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 271
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 35, 61

Conread position: 387-550
Cow position: chrX:31256701-31256863 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 35

Conread position: 387-592
Cow position: chrX:37750420-37750218 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 90

Conread position: 387-615
Cow position: chrX:41167131-41166903 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 35

Conread position: 387-630
Cow position: chrX:678734-678481 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 52, 71

Conread position: 387-646
Cow position: chrX:2467713-2467975 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 141

Conread position: 387-651
Cow position: chrX:40481039-40480776 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 153

Conread position: 387-652
Cow position: chrX:26440946-26440688 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 79, 51

Conread position: 387-661
Cow position: chrX:27680235-27680504 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 252, 46

Conread position: 387-692
Cow position: chrX:42171466-42171160 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 52, 158

Conread position: 387-697
Cow position: chrX:11073355-11073049 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 51, 27

Conread position: 387-697
Cow position: chrX:17725808-17726116 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 35

Conread position: 387-697
Cow position: chrX:29289410-29289718 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 157

Conread position: 387-697
Cow position: chrX:32623416-32623713 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 95

Conread position: 387-698
Cow position: chrX:45845929-45846244 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 53, 181

Conread position: 387-702
Cow position: chrX:36067853-36068162 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 92, 46

Conread position: 387-707
Cow position: chrX:24424554-24424249 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 44

Conread position: 387-709
Cow position: chrX:31311859-31312183 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 122

Conread position: 387-711
Cow position: chrX:8797081-8797405 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 169

Conread position: 387-715
Cow position: chrX:619174-618848 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 182

Conread position: 387-715
Cow position: chrX:40269318-40269650 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 183

Conread position: 387-716
Cow position: chrX:23091715-23092028 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 52, 37

Conread position: 387-724
Cow position: chrX:34401831-34402173 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 12, 28

Conread position: 387-739
Cow position: chrX:13382159-13382510 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 172

Conread position: 387-759
Cow position: chrX:22821881-22822264 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 261
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 143

Conread position: 387-760
Cow position: chrX:35542725-35543094 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 175

Conread position: 387-762
Cow position: chrX:12309555-12309173 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 52, 67

Conread position: 387-765
Cow position: chrX:34238554-34238938 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 258
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 35

Conread position: 387-766
Cow position: chrX:10831663-10831265 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 271
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 180

Conread position: 387-766
Cow position: chrX:31436316-31436685 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 33

Conread position: 387-767
Cow position: chrX:1176149-1175773 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 252
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 147

Conread position: 387-767
Cow position: chrX:25816062-25815682 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 259
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 152, 30

Conread position: 387-767
Cow position: chrX:29601999-29601612 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 163

Conread position: 387-767
Cow position: chrX:33000737-33001115 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 263
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 65

Conread position: 387-767
Cow position: chrX:35224132-35224493 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 62, 42

Conread position: 387-769
Cow position: chrX:15596871-15597247 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 260
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 110

Conread position: 387-772
Cow position: chrX:29545046-29544664 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 17

Conread position: 387-773
Cow position: chrX:38642091-38642465 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 95

Conread position: 387-776
Cow position: chrX:27509186-27508798 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 266
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 52, 37

Conread position: 387-776
Cow position: chrX:31489345-31489747 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 265
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 150

Conread position: 387-777
Cow position: chrX:9201380-9201771 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 159

Conread position: 387-777
Cow position: chrX:25035554-25035153 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 278
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 163

Conread position: 387-777
Cow position: chrX:27446522-27446911 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 52

Conread position: 387-777
Cow position: chrX:38549282-38549675 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 89

Conread position: 387-777
Cow position: chrX:38963940-38964324 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 76, 37

Conread position: 387-777
Cow position: chrX:45110489-45110879 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 269
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 52, 68

Conread position: 387-779
Cow position: chrX:44054635-44055033 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 275
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 35

Conread position: 387-780
Cow position: chrX:24366000-24365592 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 279
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 39, 188

Conread position: 387-780
Cow position: chrX:31442988-31442608 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 51, 37

Conread position: 387-780
Cow position: chrX:34792477-34792092 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 56

Conread position: 387-781
Cow position: chrX:6407382-6407775 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 53

Conread position: 387-781
Cow position: chrX:9252344-9251932 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 16

Conread position: 387-781
Cow position: chrX:11655922-11656310 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 151

Conread position: 387-781
Cow position: chrX:17231568-17231968 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 270
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 80, 51

Conread position: 387-781
Cow position: chrX:20340057-20339664 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 21

Conread position: 387-781
Cow position: chrX:22921147-22921552 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 266
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 14

Conread position: 387-782
Cow position: chrX:4398959-4399349 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 95

Conread position: 387-782
Cow position: chrX:21593117-21593522 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 283
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 170

Conread position: 387-782
Cow position: chrX:36283179-36283571 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 280
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 52, 160

Conread position: 387-783
Cow position: chrX:3579778-3580177 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 83, 42

Conread position: 387-783
Cow position: chrX:4269233-4268838 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 269
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 42

Conread position: 387-783
Cow position: chrX:4633017-4632622 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 284
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 51, 26

Conread position: 387-783
Cow position: chrX:11633512-11633916 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 273
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 35

Conread position: 387-783
Cow position: chrX:13177631-13177252 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 37

Conread position: 387-783
Cow position: chrX:27442722-27442306 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 286
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 51

Conread position: 387-783
Cow position: chrX:31949097-31948701 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 261
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 92, 52

Conread position: 387-786
Cow position: chrX:14973899-14973520 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 268
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 82, 19

Conread position: 387-786
Cow position: chrX:33855399-33854988 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 48

Conread position: 387-787
Cow position: chrX:38218541-38218950 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 114

Conread position: 387-819
Cow position: chrX:42247350-42246910 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 51

Conread position: 388-589
Cow position: chrX:38439309-38439514 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 181

Conread position: 388-715
Cow position: chrX:11717948-11717627 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 50, 27

Conread position: 388-715
Cow position: chrX:14599364-14599690 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 50, 147

Conread position: 388-715
Cow position: chrX:18695085-18694772 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 86, 36

Conread position: 388-715
Cow position: chrX:27516367-27516678 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 36

Conread position: 388-749
Cow position: chrX:14275901-14275549 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 18

Conread position: 388-766
Cow position: chrX:46072986-46072614 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 253
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 52

Conread position: 388-767
Cow position: chrX:44396856-44397228 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 83, 41

Conread position: 388-783
Cow position: chrX:14884127-14883724 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 181

Conread position: 388-783
Cow position: chrX:42492680-42492288 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 274
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 36

Conread position: 389-606
Cow position: chrX:42461910-42461694 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 55

Conread position: 389-610
Cow position: chrX:36961471-36961695 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 158

Conread position: 389-668
Cow position: chrX:7571742-7572018 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 80, 44

Conread position: 389-668
Cow position: chrX:21004517-21004797 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 49

Conread position: 389-686
Cow position: chrX:917536-917237 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 157

Conread position: 389-766
Cow position: chrX:34441616-34441237 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 264
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 33

Conread position: 389-781
Cow position: chrX:12979995-12979604 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 93

Conread position: 389-781
Cow position: chrX:40035609-40035206 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 52

Conread position: 389-783
Cow position: chrX:5638330-5637944 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 49

Conread position: 389-783
Cow position: chrX:25208011-25207628 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 285
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 145

Conread position: 390-758
Cow position: chrX:41068564-41068928 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 244
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 76, 21

Conread position: 390-780
Cow position: chrX:6413881-6414264 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 49, 38

Conread position: 390-780
Cow position: chrX:45430180-45429800 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 267
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 44

Conread position: 397-667
Cow position: chrX:23514174-23513905 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 16

Conread position: 397-777
Cow position: chrX:8869562-8869176 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 151

Conread position: 397-783
Cow position: chrX:36355959-36356338 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 275
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 41, 25

Conread position: 398-781
Cow position: chrX:46587662-46588051 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 78, 31

Conread position: 398-782
Cow position: chrX:26492847-26493239 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 265
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 147

Conread position: 401-698
Cow position: chrX:38066606-38066311 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 10, 6

Conread position: 402-766
Cow position: chrX:1616199-1615842 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 142

Conread position: 402-781
Cow position: chrX:12249652-12250046 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 262
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 28

Conread position: 404-777
Cow position: chrX:20584169-20584539 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 148

Conread position: 405-689
Cow position: chrX:616415-616125 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 146

Conread position: 405-776
Cow position: chrX:8917244-8917621 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 254
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 174

Conread position: 405-782
Cow position: chrX:35822190-35822563 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 251
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 109

Conread position: 407-698
Cow position: chrX:48014291-48014578 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 189
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 68

Conread position: 409-748
Cow position: chrX:13647933-13647586 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 116

Conread position: 409-767
Cow position: chrX:30963020-30962658 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 243
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 28

Conread position: 409-767
Cow position: chrX:41526669-41526317 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 30, 93

Conread position: 409-769
Cow position: chrX:41122922-41123264 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 28

Conread position: 409-770
Cow position: chrX:27227974-27228349 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 5, 141

Conread position: 409-810
Cow position: chrX:5118650-5118239 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 117

Conread position: 412-767
Cow position: chrX:20151700-20152065 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 254
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 11, 152

Conread position: 412-777
Cow position: chrX:161271-161627 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 54

Conread position: 413-645
Cow position: chrX:27946200-27945964 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 19

Conread position: 413-765
Cow position: chrX:35885874-35885517 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 122

Conread position: 413-767
Cow position: chrX:21986436-21986084 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 156

Conread position: 413-777
Cow position: chrX:32420074-32420437 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 251
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 121

Conread position: 413-780
Cow position: chrX:34313889-34314252 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 27

Conread position: 413-782
Cow position: chrX:16762622-16763000 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 254
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 94

Conread position: 413-785
Cow position: chrX:11939071-11938717 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 104

Conread position: 413-810
Cow position: chrX:47280076-47279678 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 259
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 145

Conread position: 414-780
Cow position: chrX:11614556-11614906 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 256
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 147

Conread position: 416-715
Cow position: chrX:9365815-9365516 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 50, 118

Conread position: 418-765
Cow position: chrX:4768606-4768943 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 235
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 75, 53

Conread position: 418-766
Cow position: chrX:30840417-30840757 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 54

Conread position: 420-713
Cow position: chrX:878513-878222 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 7, 21

Conread position: 420-782
Cow position: chrX:41027020-41027392 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 123

Conread position: 421-782
Cow position: chrX:31729307-31729669 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 233
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 140

Conread position: 422-696
Cow position: chrX:37986098-37986366 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 60

Conread position: 422-715
Cow position: chrX:7710678-7710382 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 120

Conread position: 422-736
Cow position: chrX:17888547-17888244 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 217, 18

Conread position: 422-767
Cow position: chrX:34554589-34554941 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 232
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 123

Conread position: 422-777
Cow position: chrX:34565148-34565513 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 248
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 21, 218

Conread position: 423-780
Cow position: chrX:12437385-12437052 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 21

Conread position: 424-741
Cow position: chrX:34532389-34532709 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 94

Conread position: 424-764
Cow position: chrX:41870938-41871271 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 60

Conread position: 425-772
Cow position: chrX:40685463-40685107 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 131

Conread position: 426-695
Cow position: chrX:19273854-19273567 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 13, 0

Conread position: 426-787
Cow position: chrX:40826886-40826510 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 124

Conread position: 429-689
Cow position: chrX:29120918-29121181 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 10, 125

Conread position: 429-695
Cow position: chrX:5017542-5017282 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 10, 115

Conread position: 429-698
Cow position: chrX:38728609-38728877 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 116

Conread position: 430-769
Cow position: chrX:6488449-6488784 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 118

Conread position: 431-777
Cow position: chrX:34505173-34504826 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 132

Conread position: 431-780
Cow position: chrX:43115025-43115380 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 7, 102

Conread position: 437-777
Cow position: chrX:4403195-4403545 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 75

Conread position: 439-769
Cow position: chrX:26881685-26881343 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 122

Conread position: 440-783
Cow position: chrX:24331662-24332009 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 99

Conread position: 442-767
Cow position: chrX:42927933-42927613 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 113

Conread position: 443-769
Cow position: chrX:29229896-29230226 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 6, 102

Conread position: 443-774
Cow position: chrX:9651138-9650803 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 70

Conread position: 443-775
Cow position: chrX:38654543-38654206 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 217
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 123

Conread position: 443-777
Cow position: chrX:33539052-33539390 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 119

Conread position: 443-782
Cow position: chrX:30338055-30337721 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 197, 94

Conread position: 445-783
Cow position: chrX:17949601-17949260 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 104

Conread position: 450-715
Cow position: chrX:169646-169386 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 32

Conread position: 450-776
Cow position: chrX:13923765-13924088 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 80

Conread position: 454-782
Cow position: chrX:46291036-46291373 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 77

Conread position: 457-773
Cow position: chrX:10516157-10516477 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 82, 24

Conread position: 460-776
Cow position: chrX:34837150-34836846 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 29, 54

Conread position: 461-783
Cow position: chrX:38560462-38560784 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 221
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 75

Conread position: 464-767
Cow position: chrX:1466069-1466380 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 90

Conread position: 474-767
Cow position: chrX:47345256-47345547 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 165, 66

Conread position: 475-713
Cow position: chrX:18273135-18272901 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 90

Conread position: 478-707
Cow position: chrX:23113204-23113434 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 25

Conread position: 478-741
Cow position: chrX:4515610-4515879 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 58

Conread position: 478-765
Cow position: chrX:36866097-36866388 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 195
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 84

Conread position: 478-766
Cow position: chrX:41192634-41192905 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 75, 34

Conread position: 478-769
Cow position: chrX:42855381-42855682 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 86, 36

Conread position: 478-777
Cow position: chrX:918801-918502 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 86

Conread position: 478-777
Cow position: chrX:20168484-20168782 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 93, 61

Conread position: 478-777
Cow position: chrX:40680537-40680842 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 200
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 61, 87

Conread position: 478-782
Cow position: chrX:6559519-6559223 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 200
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 162, 59

Conread position: 478-783
Cow position: chrX:12095847-12095539 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 118, 67

Conread position: 480-780
Cow position: chrX:4153107-4152813 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 67, 89

Conread position: 483-715
Cow position: chrX:5135594-5135360 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 156, 80

Conread position: 483-782
Cow position: chrX:22115385-22115082 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 70

Conread position: 486-691
Cow position: chrX:12082391-12082188 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 155, 63

Conread position: 490-777
Cow position: chrX:13121868-13122171 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 490-785
Cow position: chrX:4109128-4109421 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 146, 44

Conread position: 491-807
Cow position: chrX:5134414-5134730 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 159, 66

Conread position: 492-757
Cow position: chrX:27511367-27511628 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 175
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 49

Conread position: 497-782
Cow position: chrX:19469561-19469283 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 142, 62

Conread position: 502-695
Cow position: chrX:46429872-46429679 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 62, 43

Conread position: 502-785
Cow position: chrX:1088194-1087913 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 27, 11

Conread position: 504-769
Cow position: chrX:22393034-22392769 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 135, 60

Conread position: 507-781
Cow position: chrX:27306407-27306670 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 133, 57

Conread position: 515-769
Cow position: chrX:24749050-24749306 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 125, 40

Conread position: 515-777
Cow position: chrX:16984590-16984863 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 26, 166

Conread position: 515-780
Cow position: chrX:6599821-6599544 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 125, 49

Conread position: 515-780
Cow position: chrX:11326137-11325878 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 124, 53

Conread position: 515-780
Cow position: chrX:42893880-42894153 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 515-782
Cow position: chrX:19394515-19394787 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 125, 40

Conread position: 516-780
Cow position: chrX:28940210-28940475 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 11

Conread position: 517-780
Cow position: chrX:17956660-17956919 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 123, 38

Conread position: 518-698
Cow position: chrX:40532078-40531900 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 121, 37

Conread position: 518-781
Cow position: chrX:4289405-4289665 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 93, 54

Conread position: 539-777
Cow position: chrX:12972666-12972906 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 25

Conread position: 539-782
Cow position: chrX:41941610-41941855 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 101, 11

Conread position: 545-780
Cow position: chrX:42432525-42432284 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 95

Conread position: 554-810
Cow position: chrX:33654846-33654582 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 107

Conread position: 555-780
Cow position: chrX:32910103-32910327 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 96

Conread position: 563-706
Cow position: chrX:29501874-29501733 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 16

Conread position: 563-780
Cow position: chrX:2935964-2936184 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 76, 128

Conread position: 563-782
Cow position: chrX:39290366-39290588 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 76, 122

Conread position: 564-776
Cow position: chrX:42836189-42836407 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 107

Conread position: 564-777
Cow position: chrX:32208814-32208600 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 83

Conread position: 565-767
Cow position: chrX:38301818-38302031 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 565-777
Cow position: chrX:16836277-16836066 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 75, 59

Conread position: 565-786
Cow position: chrX:4559748-4559970 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 75, 37

Conread position: 566-773
Cow position: chrX:4466977-4467174 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 73, 125

Conread position: 567-775
Cow position: chrX:29467767-29467557 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 72, 0

Conread position: 568-777
Cow position: chrX:42479845-42480055 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 72, 125

Conread position: 568-782
Cow position: chrX:27668946-27668730 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 168

Conread position: 569-780
Cow position: chrX:20957251-20957468 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 206

Conread position: 570-791
Cow position: chrX:3806696-3806919 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 100

Conread position: 571-777
Cow position: chrX:11762986-11762783 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 121

Conread position: 574-777
Cow position: chrX:31479989-31480193 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 112, 65

Conread position: 574-783
Cow position: chrX:47854999-47855210 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 141, 0

Conread position: 575-766
Cow position: chrX:41810149-41809959 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 96

Conread position: 575-777
Cow position: chrX:5026275-5026479 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 63, 115

Conread position: 575-777
Cow position: chrX:31744986-31744787 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 143

Conread position: 576-767
Cow position: chrX:27075031-27074834 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 579-767
Cow position: chrX:35681589-35681784 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 93

Conread position: 580-769
Cow position: chrX:35383012-35382823 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 580-776
Cow position: chrX:32866899-32867097 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 0

Conread position: 586-767
Cow position: chrX:8326934-8327122 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 586-777
Cow position: chrX:41453332-41453526 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 586-780
Cow position: chrX:23359081-23358886 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 36

Conread position: 586-783
Cow position: chrX:20583696-20583893 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 161

Conread position: 588-780
Cow position: chrX:48822310-48822111 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 588-783
Cow position: chrX:37749951-37749762 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 29

Conread position: 591-783
Cow position: chrX:34991399-34991594 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 49, 0

Conread position: 593-767
Cow position: chrX:6480559-6480378 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 593-791
Cow position: chrX:41858845-41858642 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 95

Conread position: 596-777
Cow position: chrX:35409792-35409979 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 67

Conread position: 598-781
Cow position: chrX:23471824-23471637 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 602-780
Cow position: chrX:20666855-20666671 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 116

Conread position: 602-780
Cow position: chrX:42875258-42875440 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 608-769
Cow position: chrX:12802-12962 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 45

Conread position: 611-765
Cow position: chrX:27170794-27170951 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 120

Conread position: 613-780
Cow position: chrX:23497634-23497467 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 73

Conread position: 615-782
Cow position: chrX:29682052-29681885 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 25, 71

Conread position: 619-776
Cow position: chrX:5487876-5487721 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 74

Conread position: 619-781
Cow position: chrX:39642559-39642397 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 21, 37

Conread position: 619-781
Cow position: chrX:41215385-41215554 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 619-783
Cow position: chrX:40556396-40556229 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 102

Conread position: 622-783
Cow position: chrX:14135744-14135908 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 639-777
Cow position: chrX:31279840-31279700 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 77, 0

Show alignments to all cow chromosomes.