Cow genome map
| Conread name: | Pig4-TMW8030C15 |
| Conread position: | 594-825 |
| Cow position: | chr15:21637365-21637589 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 594-825 |
| Cow position: | chr15:26933135-26933358 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 219, 65 |
| Conread position: | 594-828 |
| Cow position: | chr15:49306887-49307112 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 596-825 |
| Cow position: | chr15:22752335-22752113 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 44, 15 |
| Conread position: | 598-714 |
| Cow position: | chr15:20647262-20647375 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-718 |
| Cow position: | chr15:3276380-3276263 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-780 |
| Cow position: | chr15:6563990-6564163 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-780 |
| Cow position: | chr15:22539741-22539570 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-811 |
| Cow position: | chr15:2590494-2590698 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-823 |
| Cow position: | chr15:3007741-3007525 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-827 |
| Cow position: | chr15:25203874-25203654 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:1785864-1786078 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:2644250-2644029 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:4139810-4139595 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:4821973-4821752 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:6158282-6158499 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:7512258-7512037 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:7586688-7586469 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:9160672-9160451 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:11596284-11596063 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:12859239-12859460 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:36329362-36329141 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:37744151-37744372 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:44576496-44576717 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:49191468-49191247 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:50151797-50152019 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 14 |
| Conread position: | 598-828 |
| Cow position: | chr15:50308374-50308153 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr15:52208399-52208178 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 599-825 |
| Cow position: | chr15:21533038-21532824 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 599-825 |
| Cow position: | chr15:45292417-45292633 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 599-828 |
| Cow position: | chr15:3721041-3720823 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr15:4214259-4214479 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr15:8576248-8576471 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr15:12442624-12442845 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 174, 13 |
| Conread position: | 599-828 |
| Cow position: | chr15:25133061-25133281 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr15:36436081-36435861 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 600-810 |
| Cow position: | chr15:18264663-18264460 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 600-828 |
| Cow position: | chr15:3793384-3793605 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 611-828 |
| Cow position: | chr15:17074252-17074044 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 612-823 |
| Cow position: | chr15:31161182-31160969 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 160, 47 |
| Conread position: | 612-824 |
| Cow position: | chr15:12041785-12041998 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 47, 117 |
| Conread position: | 612-825 |
| Cow position: | chr15:7566112-7566316 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-825 |
| Cow position: | chr15:8028903-8028702 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 612-825 |
| Cow position: | chr15:17193448-17193241 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 53, 63 |
| Conread position: | 612-825 |
| Cow position: | chr15:42727485-42727690 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr15:6163993-6163787 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr15:25164993-25164785 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr15:32714811-32715018 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 615-825 |
| Cow position: | chr15:19724859-19725063 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 615-825 |
| Cow position: | chr15:29884208-29884006 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 615-828 |
| Cow position: | chr15:10826575-10826780 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 615-828 |
| Cow position: | chr15:21645589-21645794 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 615-828 |
| Cow position: | chr15:26388855-26388651 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 616-825 |
| Cow position: | chr15:16967797-16967995 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 617-780 |
| Cow position: | chr15:6658542-6658697 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 620-828 |
| Cow position: | chr15:34064063-34064259 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 621-828 |
| Cow position: | chr15:16927020-16927220 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 621-828 |
| Cow position: | chr15:28487024-28486824 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.