Cow genome map
| Conread name: | Pig4-TMW8030C15 |
| Conread position: | 594-823 |
| Cow position: | chr16:49094352-49094136 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 594-828 |
| Cow position: | chr16:18975613-18975839 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 594-828 |
| Cow position: | chr16:23772930-23772704 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 596-828 |
| Cow position: | chr16:18650836-18650613 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 596-828 |
| Cow position: | chr16:46555170-46555393 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 598-824 |
| Cow position: | chr16:26627502-26627719 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-827 |
| Cow position: | chr16:7385515-7385735 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:2960429-2960650 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:6677471-6677688 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:7712366-7712587 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:13721839-13721617 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:16149998-16149777 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:16942466-16942687 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:18212445-18212224 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:19081796-19082017 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:23877224-23877445 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:24209648-24209427 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:24407662-24407883 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:24753177-24752956 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:27593074-27592853 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:28193551-28193330 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:29107394-29107173 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:35342751-35342530 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:39788254-39788033 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:42211246-42211467 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:45465171-45464949 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr16:49780200-49779979 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 599-799 |
| Cow position: | chr16:1957976-1957784 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 599-802 |
| Cow position: | chr16:23403564-23403758 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-807 |
| Cow position: | chr16:4079211-4079018 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-825 |
| Cow position: | chr16:193187-192971 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 599-825 |
| Cow position: | chr16:5665852-5666067 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-825 |
| Cow position: | chr16:41834617-41834833 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 599-828 |
| Cow position: | chr16:14040176-14040396 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr16:19062586-19062805 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr16:22798953-22798733 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr16:28206360-28206140 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 600-828 |
| Cow position: | chr16:15312031-15312252 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 600-828 |
| Cow position: | chr16:20475455-20475674 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 603-777 |
| Cow position: | chr16:12248394-12248550 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 611-825 |
| Cow position: | chr16:6389894-6389688 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 612-828 |
| Cow position: | chr16:7043169-7042961 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr16:12651683-12651891 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 615-823 |
| Cow position: | chr16:4756776-4756976 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 615-824 |
| Cow position: | chr16:4080311-4080511 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 615-828 |
| Cow position: | chr16:42849414-42849206 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 71, 44 |
| Conread position: | 616-792 |
| Cow position: | chr16:14100615-14100783 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 616-828 |
| Cow position: | chr16:19778170-19777966 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 168, 43 |
| Conread position: | 616-828 |
| Cow position: | chr16:34809136-34809340 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 620-828 |
| Cow position: | chr16:14570354-14570546 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 620-828 |
| Cow position: | chr16:16540168-16540368 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 624-826 |
| Cow position: | chr16:13601847-13601653 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.