Cow genome map
| Conread name: | Pig4-TMW8030C15 |
| Conread position: | 594-757 |
| Cow position: | chr20:33563914-33564068 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 594-799 |
| Cow position: | chr20:14327119-14326922 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 594-828 |
| Cow position: | chr20:35094020-35094246 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 596-828 |
| Cow position: | chr20:24542836-24543059 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 598-756 |
| Cow position: | chr20:30431781-30431930 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-768 |
| Cow position: | chr20:20439467-20439306 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-772 |
| Cow position: | chr20:14925140-14924975 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-815 |
| Cow position: | chr20:826282-826486 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-825 |
| Cow position: | chr20:22274607-22274388 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 222, 14 |
| Conread position: | 598-826 |
| Cow position: | chr20:18651111-18651330 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:753943-754164 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:1024751-1024530 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:9223354-9223575 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:12176988-12176767 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:14836687-14836908 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:17863626-17863847 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:24567770-24567549 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:25122735-25122514 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:26052851-26052630 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:28100311-28100090 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:28323980-28324201 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:30146933-30147154 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:30384743-30384523 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:30737141-30736920 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:31784811-31784590 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:34458768-34458551 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:39391640-39391419 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 598-828 |
| Cow position: | chr20:40588087-40588305 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 206, 13 |
| Conread position: | 599-718 |
| Cow position: | chr20:10921423-10921307 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-757 |
| Cow position: | chr20:14094053-14094202 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-824 |
| Cow position: | chr20:8970402-8970190 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-825 |
| Cow position: | chr20:19654193-19653976 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 599-826 |
| Cow position: | chr20:13619285-13619073 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr20:5958642-5958422 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr20:9339516-9339738 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr20:11454100-11453878 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 599-828 |
| Cow position: | chr20:35159088-35158868 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 611-825 |
| Cow position: | chr20:9536408-9536616 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 611-825 |
| Cow position: | chr20:10405208-10405415 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 78, 48 |
| Conread position: | 611-825 |
| Cow position: | chr20:16942126-16941929 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 611-825 |
| Cow position: | chr20:21925730-21925523 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 205, 48 |
| Conread position: | 612-718 |
| Cow position: | chr20:15436718-15436822 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr20:8445927-8446135 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr20:28443834-28443629 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr20:30479624-30479832 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr20:36854257-36854464 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 615-757 |
| Cow position: | chr20:13877479-13877341 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 616-828 |
| Cow position: | chr20:18168659-18168863 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 616-828 |
| Cow position: | chr20:22222087-22221886 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 620-825 |
| Cow position: | chr20:33731267-33731465 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 621-806 |
| Cow position: | chr20:16107025-16107202 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.