Cow genome map
| Conread name: | Pig4-TMW8030C15 |
| Conread position: | 594-827 |
| Cow position: | chr4:3129019-3129244 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 594-827 |
| Cow position: | chr4:37786463-37786690 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 194, 65 |
| Conread position: | 594-828 |
| Cow position: | chr4:3892932-3893160 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 51, 66 |
| Conread position: | 594-828 |
| Cow position: | chr4:10122570-10122795 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 595-828 |
| Cow position: | chr4:606771-606995 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 596-824 |
| Cow position: | chr4:60651748-60651968 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 596-828 |
| Cow position: | chr4:30295117-30295340 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 598-718 |
| Cow position: | chr4:6266047-6265930 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 598-718 |
| Cow position: | chr4:13500813-13500696 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-718 |
| Cow position: | chr4:46744249-46744132 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-787 |
| Cow position: | chr4:38564525-38564345 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-824 |
| Cow position: | chr4:27337380-27337597 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-825 |
| Cow position: | chr4:5882644-5882862 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:120521-120300 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:162249-162470 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:5441492-5441271 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:9357407-9357628 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:17033332-17033111 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:17821699-17821920 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:18335782-18335557 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:18738575-18738354 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:19586087-19585866 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:21044992-21044774 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:30474548-30474770 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 88, 14 |
| Conread position: | 598-828 |
| Cow position: | chr4:33020463-33020243 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:44778023-44777801 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 140, 14 |
| Conread position: | 598-828 |
| Cow position: | chr4:46585738-46585517 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:47116005-47116226 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:47263946-47264167 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:54161894-54161677 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:60224706-60224488 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:60855929-60856150 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:61817235-61817014 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 598-828 |
| Cow position: | chr4:62120175-62120397 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 599-811 |
| Cow position: | chr4:30573128-30573331 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 599-824 |
| Cow position: | chr4:67767589-67767805 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr4:4673268-4673032 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 93, 12 |
| Conread position: | 599-828 |
| Cow position: | chr4:17067943-17067723 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr4:18973664-18973882 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 599-828 |
| Cow position: | chr4:20616548-20616328 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr4:20656895-20656675 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 599-828 |
| Cow position: | chr4:35261217-35260997 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 610-776 |
| Cow position: | chr4:28613061-28613216 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 50, 34 |
| Conread position: | 611-764 |
| Cow position: | chr4:13327947-13327801 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 612-825 |
| Cow position: | chr4:43476609-43476405 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr4:533472-533680 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr4:3801107-3800899 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr4:8936053-8936261 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr4:24140057-24140265 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr4:29530276-29530069 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr4:30307403-30307196 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr4:35575345-35575553 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr4:47020483-47020693 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 612-828 |
| Cow position: | chr4:48732858-48733066 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 612-828 |
| Cow position: | chr4:55657360-55657152 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 615-828 |
| Cow position: | chr4:21065241-21065448 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 616-756 |
| Cow position: | chr4:52979982-52980113 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 621-828 |
| Cow position: | chr4:16735503-16735700 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 622-810 |
| Cow position: | chr4:9519415-9519595 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 624-828 |
| Cow position: | chr4:10044575-10044379 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 161 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.